Data search
Results for MligTC455_45391
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45391 | 832 | 17.33 | Mlig455_039447 | Neo: - Age: Down-Up-Down |
OXSR1 | Mlig455_039447 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=202.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=141.2]; Fungal protein kinase [PF17667.3, score=28.8]; Kinase-like [PF14531.8, score=26.2]; ABC1 atypical kinase-like domain [PF03109.18, score=24.2]} {Human: ENSG00000172939, OXSR1, oxidative stress responsive 1, [RH, Score=297, Expect=1e-95]} {Mouse: ENSMUSG00000036737, Oxsr1, oxidative-stress responsive 1, [RH, Score=297, Expect=8e-96]} {Dmel: FBgn0023083, fray, frayed, [Score=308, Expect=6e-100]} {Celegans: WBGene00013355, gck-3, Germinal center kinase 3, [RH, Score=296, Expect=4e-95]} {Smed: dd_Smed_v6_1366_0_1, dd_Smed_v6_1366_0_1, [Score=347, Expect=3e-116]} {RNA1509_38983} {RNA1310_4597.1} {RNA815_10348.1} |
Cumulative graph for MligTC455_45391
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.519 | 4.449 | 0.54211 | 1.00000 | |
| RegionR2 | -0.422 | 4.449 | 0.21596 | 0.58237 | |
| RegionR3 | -0.003 | 4.449 | 0.99100 | 1.00000 | |
| RegionR4 | 0.352 | 4.449 | 0.28679 | 0.59631 | |
| RegionR5 | 0.78 | 4.449 | 0.00034 | 0.00434 | |
| RegionR6 | -0.151 | 4.449 | 0.58485 | 1.00000 | |
| RegionR7 | -0.462 | 4.449 | 0.23395 | 0.85832 | |
| RegionR8 | -0.612 | 4.449 | 0.19755 | 0.79407 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.493 | 4.449 | 0.31452 | 1.00000 | |
| RegenerationR2 | 0.271 | 4.449 | 0.30033 | 0.74204 | |
| RegenerationR3 | 0.261 | 4.449 | 0.36370 | 0.77970 | |
| RegenerationR4 | -0.001 | 4.449 | 0.99466 | 1.00000 | |
| RegenerationR5 | -0.302 | 4.449 | 0.22286 | 0.65736 | |
| RegenerationR6 | 0.069 | 4.449 | 0.82676 | 0.98946 | |
| RegenerationBL | -0.893 | 4.449 | 0.09745 | 0.36643 | |
| RegenerationTP | 0.17 | 4.449 | 0.70575 | 1.00000 |
Genes with expression patterns similar to MligTC455_45391
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45391 | 832 | 17.33 | Mlig455_039447 | Neo: - Age: Down-Up-Down |
OXSR1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_039447 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=202.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=141.2]; Fungal protein kinase [PF17667.3, score=28.8]; Kinase-like [PF14531.8, score=26.2]; ABC1 atypical kinase-like domain [PF03109.18, score=24.2]} {Human: ENSG00000172939, OXSR1, oxidative stress responsive 1, [RH, Score=297, Expect=1e-95]} {Mouse: ENSMUSG00000036737, Oxsr1, oxidative-stress responsive 1, [RH, Score=297, Expect=8e-96]} {Dmel: FBgn0023083, fray, frayed, [Score=308, Expect=6e-100]} {Celegans: WBGene00013355, gck-3, Germinal center kinase 3, [RH, Score=296, Expect=4e-95]} {Smed: dd_Smed_v6_1366_0_1, dd_Smed_v6_1366_0_1, [Score=347, Expect=3e-116]} {RNA1509_38983} {RNA1310_4597.1} {RNA815_10348.1} |
| 2. | MligTC455_47237 | 463 | 9.64 | Mlig455_050031 | Neo: Irradiation Age: logFC(26M/2M)=0.394 |
UBASH3B | 1.752 | - | - | 0.799 | - | - | 0.953 | Mlig455_050031 {REF} {Length: 2718} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=51.3]} {Human: ENSG00000154127, UBASH3B, ubiquitin associated and SH3 domain containing B, [RH, Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000032020, Ubash3b, ubiquitin associated and SH3 domain containing, B, [RH, Score=169, Expect=5e-44]} {Dmel: FBgn0039137, CG13604, [RH, Score=120, Expect=5e-28]} {Celegans: WBGene00020321, T07F12.1, [RH, Score=116, Expect=1e-28]} {Smed: dd_Smed_v6_12024_0_1, dd_Smed_v6_12024_0_1, [RH, Score=162, Expect=4e-42]} {RNA1509_46344} {RNA1310_4333.1, RNA1509_46344} {RNA1509_46344, RNA815_13389} |
| 3. | MligTC455_25372 | 189 | 3.93 | Mlig455_014810, Mlig455_048359 | Neo: - Age: - |
NCAM2 | 1.711 | - | - | 0.744 | - | - | 0.967 | Mlig455_014810 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=37.5]; Immunoglobulin domain [PF13895.8, score=33.5]; Immunoglobulin I-set domain [PF07679.18, score=29.1]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=56.6, Expect=3e-08]} {RNA1509_40266} {RNA1310_23286} {RNA815_17849} Mlig455_048359 {REF} {Length: 4017} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=101.4]; Immunoglobulin I-set domain [PF07679.18, score=80.3]; Immunoglobulin domain [PF13895.8, score=72.0]; Fibronectin type III domain [PF00041.23, score=63.2]; Immunoglobulin domain [PF00047.27, score=50.4]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=42.8]; Immunoglobulin V-set domain [PF07686.19, score=28.2]} {Human: ENSG00000154654, NCAM2, neural cell adhesion molecule 2, [RH, Score=142, Expect=4e-34]} {Mouse: ENSMUSG00000022762, Ncam2, neural cell adhesion molecule 2, [Score=137, Expect=8e-33]} {Dmel: FBgn0000635, Fas2, Fasciclin 2, [RH, Score=130, Expect=8e-31]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=70.9, Expect=3e-12]} {Smed: dd_Smed_v6_9674_0_1, dd_Smed_v6_9674_0_1, [Score=163, Expect=1e-41]} {RNA1509_40266} {RNA1310_7040, RNA1509_40266} {RNA1509_40266, RNA815_17849} |
| 4. | MligTC455_21300 | 267 | 5.56 | Mlig455_055269 | Neo: - Age: - |
SYNCRIP | 0.96 | - | - | 0.960 | - | - | - | Mlig455_055269 {REF} {Length: 3447} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=144.9]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=39.7]; Occluded RNA-recognition motif [PF16842.7, score=25.0]; RNA recognition motif [PF16367.7, score=23.5]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [RH, Score=374, Expect=6e-120]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=357, Expect=8e-113]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=357, Expect=8e-113]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [RH, Score=372, Expect=9e-120]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [RH, Score=358, Expect=3e-113]} {Dmel: FBgn0038826, Syp, Syncrip, [RH, Score=407, Expect=3e-131]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [RH, Score=317, Expect=5e-98]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=253, Expect=5e-74]} {RNA1509_41895} {RNA1310_12864, RNA1509_41895} {RNA1509_41895, RNA815_4749.1} |
| 5. | MligTC455_51044 | 1211 | 25.23 | Mlig455_008767, Mlig455_008799 | Neo: - Age: - |
OSBPL11 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_008767 {REF} {Length: 4082} {Pfam: Oxysterol-binding protein [PF01237.20, score=264.7]; PH domain [PF00169.31, score=36.2]; Pleckstrin homology domain [PF15409.8, score=31.3]} {Human: ENSG00000144909, OSBPL11, oxysterol binding protein like 11, [RH, Score=435, Expect=1e-138]; ENSG00000144645, OSBPL10, oxysterol binding protein like 10, [RH, Score=425, Expect=2e-135]} {Mouse: ENSMUSG00000022807, Osbpl11, oxysterol binding protein-like 11, [RH, Score=434, Expect=3e-138]; ENSMUSG00000040875, Osbpl10, oxysterol binding protein-like 10, [RH, Score=425, Expect=8e-137]} {Dmel: FBgn0033463, CG1513, [Score=358, Expect=3e-113]} {Celegans: WBGene00016331, obr-4, Oxysterol-binding protein, [Score=316, Expect=2e-98]} {Smed: dd_Smed_v6_7299_0_1, dd_Smed_v6_7299_0_1, [RH, Score=382, Expect=9e-119]} {RNA1509_10614, RNA1509_25738} {RNA1310_3960.1, RNA1509_25738} {RNA1509_25738, RNA815_2691} Mlig455_008799 {REF} {Length: 220} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38576} {RNA1310_3960.1} {RNA815_27097} |
| 6. | MligTC455_16065 | 242 | 5.04 | Mlig455_002617 | Neo: - Age: - |
FBXO42 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_002617 {REF} {Length: 2398} {TRANSSPLICED} {Pfam: Kelch motif [PF13854.8, score=78.2]; Galactose oxidase, central domain [PF13418.8, score=73.7]; Galactose oxidase, central domain [PF13415.8, score=64.6]; Kelch motif [PF13964.8, score=57.9]; Kelch motif [PF01344.27, score=52.0]; Kelch motif [PF07646.17, score=28.0]} {Human: ENSG00000037637, FBXO42, F-box protein 42, [RH, Score=89.0, Expect=7e-18]} {Mouse: ENSMUSG00000028920, Fbxo42, F-box protein 42, [RH, Score=87.8, Expect=9e-18]} {RNA1509_24471, RNA1509_42618} {RNA1310_13364.1, RNA1509_24471, RNA1509_42618} {RNA1509_24471, RNA1509_42618, RNA815_14795} |
| 7. | MligTC455_30729 | 485 | 10.1 | Mlig455_003248 | Neo: - Age: - |
METAP1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_003248 {REF} {Length: 2261} {TRANSSPLICED} {Pfam: Metallopeptidase family M24 [PF00557.26, score=168.8]; zf-MYND-like zinc finger, mRNA-binding [PF15801.7, score=69.4]} {Human: ENSG00000164024, METAP1, methionyl aminopeptidase 1, [RH, Score=471, Expect=4e-166]} {Mouse: ENSMUSG00000005813, Metap1, methionyl aminopeptidase 1, [RH, Score=466, Expect=2e-164]} {Dmel: FBgn0039219, CG13630, [RH, Score=489, Expect=4e-174]} {Celegans: WBGene00003129, map-1, Methionine AminoPeptidase, [RH, Score=455, Expect=9e-161]} {Smed: dd_Smed_v6_3555_0_1, dd_Smed_v6_3555_0_1, [RH, Score=511, Expect=0.0]} {RNA1509_6441} {RNA1310_22393.1} {RNA815_7042} |
| 8. | MligTC455_44260 | 140 | 2.91 | Mlig455_023873 | Neo: - Age: Down-Down-Up |
HSF1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_023873 {REF} {Length: 3292} {TRANSSPLICED} {Pfam: HSF-type DNA-binding [PF00447.19, score=100.6]} {Human: ENSG00000284774, HSF1, heat shock transcription factor 1, [Score=136, Expect=2e-34]; ENSG00000185122, HSF1, heat shock transcription factor 1, [Score=136, Expect=2e-34]; ENSG00000025156, HSF2, heat shock transcription factor 2, [Score=133, Expect=4e-33]} {Mouse: ENSMUSG00000022556, Hsf1, heat shock factor 1, [Score=135, Expect=2e-34]; ENSMUSG00000019878, Hsf2, heat shock factor 2, [Score=132, Expect=7e-33]} {Dmel: FBgn0001222, Hsf, Heat shock factor, [RH, Score=127, Expect=5e-31]} {Celegans: WBGene00002004, hsf-1, Heat Shock Factor; Heat shock transcription factor 1, [Score=127, Expect=4e-31]} {Smed: dd_Smed_v6_7535_0_1, dd_Smed_v6_7535_0_1, [RH, Score=108, Expect=4e-25]} {RNA1509_17562} {RNA1310_15982.2} {RNA815_22439} |
| 9. | MligTC455_46194 | 281 | 5.86 | Mlig455_038867 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.707 Region-enriched R4: 2.107/0.01387 |
FBXO33 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_038867 {REF} {Length: 3995} {Pfam: F-box-like [PF12937.9, score=24.1]} {Human: ENSG00000165355, FBXO33, F-box protein 33, [RH, Score=73.6, Expect=3e-13]} {Mouse: ENSMUSG00000035329, Fbxo33, F-box protein 33, [RH, Score=70.1, Expect=2e-12]} {Dmel: FBgn0035959, CG4911, [RH, Score=123, Expect=1e-30]} {RNA1509_34211, RNA1509_49549, RNA1509_54797} {RNA1310_15576, RNA1509_34211, RNA1509_49549, RNA1509_54797} {RNA1509_34211, RNA1509_49549, RNA1509_54797, RNA815_6250.1} |
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