TomoSeq data search

Data search

Results for MligTC455_44260

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44260

140

2.91

Mlig455_023873

Neo: -

Age: Down-Down-Up

HSF1

Mlig455_023873 {REF} {Length: 3292} {TRANSSPLICED} {Pfam: HSF-type DNA-binding [PF00447.19, score=100.6]} {Human: ENSG00000284774, HSF1, heat shock transcription factor 1, [Score=136, Expect=2e-34]; ENSG00000185122, HSF1, heat shock transcription factor 1, [Score=136, Expect=2e-34]; ENSG00000025156, HSF2, heat shock transcription factor 2, [Score=133, Expect=4e-33]} {Mouse: ENSMUSG00000022556, Hsf1, heat shock factor 1, [Score=135, Expect=2e-34]; ENSMUSG00000019878, Hsf2, heat shock factor 2, [Score=132, Expect=7e-33]} {Dmel: FBgn0001222, Hsf, Heat shock factor, [RH, Score=127, Expect=5e-31]} {Celegans: WBGene00002004, hsf-1, Heat Shock Factor; Heat shock transcription factor 1, [Score=127, Expect=4e-31]} {Smed: dd_Smed_v6_7535_0_1, dd_Smed_v6_7535_0_1, [RH, Score=108, Expect=4e-25]} {RNA1509_17562} {RNA1310_15982.2} {RNA815_22439}

Cumulative graph for MligTC455_44260

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.812	2.326	0.34571	0.98940
RegionR2	0.14	2.326	0.87090	1.00000
RegionR3	-0.504	2.326	0.40349	0.93125
RegionR4	0.838	2.326	0.30984	0.62433
RegionR5	-1.092	2.326	0.06004	0.21334
RegionR6	-0.743	2.326	0.24935	0.83542
RegionR7	-0.612	2.326	0.50848	1.00000
RegionR8	0.161	2.326	0.88146	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.588	2.326	0.30605	0.99987
RegenerationR2	-0.024	2.326	0.96997	1.00000
RegenerationR3	0.155	2.326	0.83261	0.99165
RegenerationR4	-0.559	2.326	0.48593	0.86181
RegenerationR5	0.682	2.326	0.30999	0.73613
RegenerationR6	0.59	2.326	0.44016	0.76401
RegenerationBL	-1.014	2.326	0.46204	0.82884
RegenerationTP	-0.163	2.326	0.87010	1.00000

Genes with expression patterns similar to MligTC455_44260

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44260	140	2.91	Mlig455_023873	Neo: - Age: Down-Down-Up	HSF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023873 {REF} {Length: 3292} {TRANSSPLICED} {Pfam: HSF-type DNA-binding [PF00447.19, score=100.6]} {Human: ENSG00000284774, HSF1, heat shock transcription factor 1, [Score=136, Expect=2e-34]; ENSG00000185122, HSF1, heat shock transcription factor 1, [Score=136, Expect=2e-34]; ENSG00000025156, HSF2, heat shock transcription factor 2, [Score=133, Expect=4e-33]} {Mouse: ENSMUSG00000022556, Hsf1, heat shock factor 1, [Score=135, Expect=2e-34]; ENSMUSG00000019878, Hsf2, heat shock factor 2, [Score=132, Expect=7e-33]} {Dmel: FBgn0001222, Hsf, Heat shock factor, [RH, Score=127, Expect=5e-31]} {Celegans: WBGene00002004, hsf-1, Heat Shock Factor; Heat shock transcription factor 1, [Score=127, Expect=4e-31]} {Smed: dd_Smed_v6_7535_0_1, dd_Smed_v6_7535_0_1, [RH, Score=108, Expect=4e-25]} {RNA1509_17562} {RNA1310_15982.2} {RNA815_22439}
2.	MligTC455_33686	84	1.75	Mlig455_006610, Mlig455_022375	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_006610 {REF} {Length: 515} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_54013.1} {RNA815_47584} Mlig455_022375 {REF} {Length: 2487} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_108649} {RNA815_38663}
3.	MligTC455_51104	131	2.73	Mlig455_059790	Neo: - Age: logFC(26M/2M)=-0.297	PDE2A	0.962	-	-	-	-	0.962	-	Mlig455_059790 {REF} {Length: 4518} {TRANSSPLICED} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=241.7]; GAF domain [PF01590.28, score=62.7]; GAF domain [PF13185.8, score=59.4]; GAF domain [PF13492.8, score=22.0]} {Human: ENSG00000186642, PDE2A, phosphodiesterase 2A, [RH, Score=744, Expect=0.0]} {Mouse: ENSMUSG00000030653, Gm45837, predicted gene 45837, [RH, Score=727, Expect=0.0]; ENSMUSG00000110195, Pde2a, phosphodiesterase 2A, cGMP-stimulated, [RH, Score=727, Expect=0.0]} {Dmel: FBgn0038237, Pde6, Phosphodiesterase 6, [Score=350, Expect=2e-104]} {Celegans: WBGene00011146, pde-2, Probable 3',5'-cyclic phosphodiesterase pde-2, [RH, Score=348, Expect=6e-106]} {Smed: dd_Smed_v6_8589_0_1, dd_Smed_v6_8589_0_1, [RH, Score=823, Expect=0.0]} {RNA1509_5437} {RNA1310_14348.2} {RNA815_851.1}
4.	MligTC455_37521	39	0.81	Mlig455_019645	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_019645 {REF} {Length: 636} {NoTransDecoderORF} {RNA1310_73845}
5.	MligTC455_09360	21	0.43	Mlig455_048899	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_048899 {REF} {Length: 373} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_32376.2} {RNA815_45036}
6.	MligTC455_45502	324	6.75	Mlig455_057191	Neo: - Age: -	USP54	0.952	-	-	-	-	-	0.952	Mlig455_057191 {REF} {Length: 5240} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=56.2]} {Human: ENSG00000166348, USP54, ubiquitin specific peptidase 54, [RH, Score=280, Expect=7e-79]} {Mouse: ENSMUSG00000034235, Usp54, ubiquitin specific peptidase 54, [RH, Score=279, Expect=7e-79]} {Dmel: FBgn0000542, ec, echinus, [RH, Score=236, Expect=1e-64]} {RNA1509_14635, RNA1509_38398} {RNA1310_8155.1, RNA1509_14635, RNA1509_38398} {RNA1509_14635, RNA1509_38398, RNA815_4435}
7.	MligTC455_16877	128	2.68	Mlig455_025721	Neo: Irradiation Age: -	RBCK1	0.951	-	-	-	-	0.951	-	Mlig455_025721 {REF} {Length: 4359} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=30.1]; Snare region anchored in the vesicle membrane C-terminus [PF12352.10, score=18.9]} {Human: ENSG00000125826, RBCK1, RANBP2-type and C3HC4-type zinc finger containing 1, [Score=58.5, Expect=7e-09]} {Mouse: ENSMUSG00000027466, Rbck1, RanBP-type and C3HC4-type zinc finger containing 1, [Score=50.1, Expect=6e-06]} {Smed: dd_Smed_v6_1293_0_1, dd_Smed_v6_1293_0_1, [Score=48.9, Expect=6e-06]} {RNA1509_38232} {RNA1310_12341.1} {RNA815_19924}
8.	MligTC455_45391	832	17.33	Mlig455_039447	Neo: - Age: Down-Up-Down	OXSR1	0.95	-	-	-	-	-	0.950	Mlig455_039447 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=202.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=141.2]; Fungal protein kinase [PF17667.3, score=28.8]; Kinase-like [PF14531.8, score=26.2]; ABC1 atypical kinase-like domain [PF03109.18, score=24.2]} {Human: ENSG00000172939, OXSR1, oxidative stress responsive 1, [RH, Score=297, Expect=1e-95]} {Mouse: ENSMUSG00000036737, Oxsr1, oxidative-stress responsive 1, [RH, Score=297, Expect=8e-96]} {Dmel: FBgn0023083, fray, frayed, [Score=308, Expect=6e-100]} {Celegans: WBGene00013355, gck-3, Germinal center kinase 3, [RH, Score=296, Expect=4e-95]} {Smed: dd_Smed_v6_1366_0_1, dd_Smed_v6_1366_0_1, [Score=347, Expect=3e-116]} {RNA1509_38983} {RNA1310_4597.1} {RNA815_10348.1}

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