Data search


search
Exact
Search

Results for MligTC455_45438

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45438 986 20.55 Mlig455_030012

Neo: -

Age: logFC(26M/2M)=0.167

EMC3 Mlig455_030012 {REF} {Length: 1714} {TRANSSPLICED} {Pfam: Integral membrane protein EMC3/TMCO1-like [PF01956.18, score=176.5]} {Human: ENSG00000125037, EMC3, ER membrane protein complex subunit 3, [RH, Score=341, Expect=3e-118]} {Mouse: ENSMUSG00000030286, Emc3, ER membrane protein complex subunit 3, [RH, Score=340, Expect=3e-118]} {Dmel: FBgn0032292, EMC3, ER Membrane protein Complex 3, [RH, Score=301, Expect=5e-103]} {Celegans: WBGene00013378, emc-3, ER membrane protein complex subunit 3, [RH, Score=290, Expect=8e-99]} {Smed: dd_Smed_v6_2461_0_1, dd_Smed_v6_2461_0_1, [RH, Score=347, Expect=3e-121]} {RNA1509_15506, RNA1509_19438, RNA1509_32461, RNA1509_4588, RNA1509_50485, RNA1509_55052} {RNA1310_16742, RNA1509_15506, RNA1509_19438, RNA1509_32461, RNA1509_4588, RNA1509_50485, RNA1509_55052} {RNA1509_15506, RNA1509_19438, RNA1509_32461, RNA1509_4588, RNA1509_50485, RNA1509_55052, RNA815_9638}

Cumulative graph for MligTC455_45438

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.331 4.689 0.67815 1.00000
RegionR2 0.511 4.689 0.25916 0.63996
RegionR3 0.029 4.689 0.93551 1.00000
RegionR4 -0.683 4.689 0.11790 0.34332
RegionR5 -0.256 4.689 0.42210 0.78202
RegionR6 -0.249 4.689 0.49036 1.00000
RegionR7 0.602 4.689 0.12963 0.67708
RegionR8 0.377 4.689 0.43406 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.174 4.689 0.16209 0.90413
RegenerationR2 -0.329 4.689 0.44330 0.84165
RegenerationR3 -0.105 4.689 0.82525 0.98947
RegenerationR4 -0.336 4.689 0.46792 0.85211
RegenerationR5 -0.264 4.689 0.54619 0.88370
RegenerationR6 -0.291 4.689 0.54767 0.83783
RegenerationBL -0.597 4.689 0.31552 0.68206
RegenerationTP -0.688 4.689 0.22604 0.67087


Genes with expression patterns similar to MligTC455_45438

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45438 986 20.55 Mlig455_030012

Neo: -

Age: logFC(26M/2M)=0.167

EMC3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_030012 {REF} {Length: 1714} {TRANSSPLICED} {Pfam: Integral membrane protein EMC3/TMCO1-like [PF01956.18, score=176.5]} {Human: ENSG00000125037, EMC3, ER membrane protein complex subunit 3, [RH, Score=341, Expect=3e-118]} {Mouse: ENSMUSG00000030286, Emc3, ER membrane protein complex subunit 3, [RH, Score=340, Expect=3e-118]} {Dmel: FBgn0032292, EMC3, ER Membrane protein Complex 3, [RH, Score=301, Expect=5e-103]} {Celegans: WBGene00013378, emc-3, ER membrane protein complex subunit 3, [RH, Score=290, Expect=8e-99]} {Smed: dd_Smed_v6_2461_0_1, dd_Smed_v6_2461_0_1, [RH, Score=347, Expect=3e-121]} {RNA1509_15506, RNA1509_19438, RNA1509_32461, RNA1509_4588, RNA1509_50485, RNA1509_55052} {RNA1310_16742, RNA1509_15506, RNA1509_19438, RNA1509_32461, RNA1509_4588, RNA1509_50485, RNA1509_55052} {RNA1509_15506, RNA1509_19438, RNA1509_32461, RNA1509_4588, RNA1509_50485, RNA1509_55052, RNA815_9638}
2. MligTC455_23984 1905 39.69 Mlig455_026449

Neo: -

Age: -

CAP2 1.706 - - - 0.964 - 0.742 Mlig455_026449 {REF} {Length: 4883} {TRANSSPLICED} {Pfam: Adenylate cyclase associated (CAP) C terminal [PF08603.13, score=200.8]; Tubulin binding cofactor C [PF07986.14, score=21.2]} {Human: ENSG00000112186, CAP2, cyclase associated actin cytoskeleton regulatory protein 2, [RH, Score=333, Expect=1e-106]; ENSG00000131236, CAP1, cyclase associated actin cytoskeleton regulatory protein 1, [RH, Score=331, Expect=6e-106]} {Mouse: ENSMUSG00000028656, Cap1, CAP, adenylate cyclase-associated protein 1 (yeast), [RH, Score=328, Expect=6e-105]; ENSMUSG00000021373, Cap2, CAP, adenylate cyclase-associated protein, 2 (yeast), [RH, Score=317, Expect=2e-100]} {Dmel: FBgn0261458, capt, capulet, [Score=305, Expect=9e-97]} {Celegans: WBGene00000294, cas-1, Adenylyl cyclase-associated protein, [RH, Score=277, Expect=2e-85]} {Smed: dd_Smed_v6_727_0_1, dd_Smed_v6_727_0_1, [Score=327, Expect=6e-105]} {RNA1509_16651, RNA1509_28910, RNA1509_4225, RNA1509_4435} {RNA1310_9728.1, RNA1509_16651, RNA1509_28910, RNA1509_4225, RNA1509_4435} {RNA1509_16651, RNA1509_28910, RNA1509_4225, RNA1509_4435, RNA815_1685.1}
3. MligTC455_23428 668 13.92 Mlig455_031275

Neo: -

Age: -

ALKBH3 0.96 - - - 0.960 - - Mlig455_031275 {REF} {Length: 3723} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=112.8]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [RH, Score=189, Expect=9e-56]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [RH, Score=183, Expect=2e-53]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [RH, Score=163, Expect=3e-46]} {RNA1509_12177, RNA1509_26961} {RNA1310_16694, RNA1509_12177, RNA1509_26961} {RNA1509_12177, RNA1509_26961, RNA815_12533}
4. MligTC455_51227 308 6.42 Mlig455_038668

Neo: -

Age: -

MFSD6 0.96 - - - 0.960 - - Mlig455_038668 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: MFS_1 like family [PF12832.9, score=201.9]; Major Facilitator Superfamily [PF07690.18, score=70.3]; Nucleoside H+ symporter [PF03825.18, score=44.6]; LacY proton/sugar symporter [PF01306.21, score=33.3]} {Human: ENSG00000151690, MFSD6, major facilitator superfamily domain containing 6, [Score=48.1, Expect=4e-06]} {Dmel: FBgn0036191, Sugb, Sugar baby, [RH, Score=139, Expect=5e-35]} {Smed: dd_Smed_v6_14524_0_1, dd_Smed_v6_14524_0_1, [RH, Score=153, Expect=3e-40]} {RNA1509_11813, RNA1509_52375} {RNA1310_11864, RNA1509_52375} {RNA1509_52375, RNA815_4659}
5. MligTC455_41787 675 14.06 Mlig455_052113

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.808

UBE2J2 0.959 - - - - - 0.959 Mlig455_052113 {REF} {Length: 1701} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=71.9]; Nuclear distribution C domain [PF16273.7, score=19.1]} {Human: ENSG00000160087, UBE2J2, ubiquitin conjugating enzyme E2 J2, [RH, Score=271, Expect=3e-91]} {Mouse: ENSMUSG00000023286, Ube2j2, ubiquitin-conjugating enzyme E2J 2, [RH, Score=268, Expect=3e-90]} {Dmel: FBgn0038515, CG5823, [RH, Score=271, Expect=2e-91]} {Celegans: WBGene00022450, ubc-26, UBiquitin Conjugating enzyme, [RH, Score=235, Expect=2e-78]} {Smed: dd_Smed_v6_2733_0_1, dd_Smed_v6_2733_0_1, [RH, Score=214, Expect=9e-70]} {RNA1509_15113} {RNA1310_17911} {RNA815_23396.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA