TomoSeq data search

Data search

Results for MligTC455_41787

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41787

675

14.06

Mlig455_052113

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.808

UBE2J2

Mlig455_052113 {REF} {Length: 1701} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=71.9]; Nuclear distribution C domain [PF16273.7, score=19.1]} {Human: ENSG00000160087, UBE2J2, ubiquitin conjugating enzyme E2 J2, [RH, Score=271, Expect=3e-91]} {Mouse: ENSMUSG00000023286, Ube2j2, ubiquitin-conjugating enzyme E2J 2, [RH, Score=268, Expect=3e-90]} {Dmel: FBgn0038515, CG5823, [RH, Score=271, Expect=2e-91]} {Celegans: WBGene00022450, ubc-26, UBiquitin Conjugating enzyme, [RH, Score=235, Expect=2e-78]} {Smed: dd_Smed_v6_2733_0_1, dd_Smed_v6_2733_0_1, [RH, Score=214, Expect=9e-70]} {RNA1509_15113} {RNA1310_17911} {RNA815_23396.1}

Cumulative graph for MligTC455_41787

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.858	4.141	0.38438	1.00000
RegionR2	-0.052	4.141	0.91227	1.00000
RegionR3	-0.328	4.141	0.38482	0.91653
RegionR4	0.589	4.141	0.15914	0.41557
RegionR5	-0.052	4.141	0.88218	1.00000
RegionR6	-0.095	4.141	0.80456	1.00000
RegionR7	0.448	4.141	0.30033	0.93514
RegionR8	0.349	4.141	0.49693	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.104	4.141	0.94900	1.00000
RegenerationR2	0.549	4.141	0.19210	0.63591
RegenerationR3	0.418	4.141	0.37478	0.78706
RegenerationR4	-0.503	4.141	0.26635	0.71377
RegenerationR5	0.039	4.141	0.92718	1.00000
RegenerationR6	0.017	4.141	0.97194	1.00000
RegenerationBL	-1.053	4.141	0.09501	0.36208
RegenerationTP	-0.421	4.141	0.45170	0.86854

Genes with expression patterns similar to MligTC455_41787

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41787	675	14.06	Mlig455_052113	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.808	UBE2J2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_052113 {REF} {Length: 1701} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=71.9]; Nuclear distribution C domain [PF16273.7, score=19.1]} {Human: ENSG00000160087, UBE2J2, ubiquitin conjugating enzyme E2 J2, [RH, Score=271, Expect=3e-91]} {Mouse: ENSMUSG00000023286, Ube2j2, ubiquitin-conjugating enzyme E2J 2, [RH, Score=268, Expect=3e-90]} {Dmel: FBgn0038515, CG5823, [RH, Score=271, Expect=2e-91]} {Celegans: WBGene00022450, ubc-26, UBiquitin Conjugating enzyme, [RH, Score=235, Expect=2e-78]} {Smed: dd_Smed_v6_2733_0_1, dd_Smed_v6_2733_0_1, [RH, Score=214, Expect=9e-70]} {RNA1509_15113} {RNA1310_17911} {RNA815_23396.1}
2.	MligTC455_21692	1737	36.19	Mlig455_027821, Mlig455_060024	Neo: - Age: -	PXK	2.632	-	-	0.767	0.915	-	0.950	Mlig455_027821 {REF} {Length: 2378} {Pfam: PX domain [PF00787.26, score=56.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=36.9]; Protein kinase domain [PF00069.27, score=36.5]; WH2 motif [PF02205.22, score=34.1]} {Human: ENSG00000168297, PXK, PX domain containing serine/threonine kinase like, [RH, Score=369, Expect=3e-121]} {Mouse: ENSMUSG00000033885, Pxk, PX domain containing serine/threonine kinase, [RH, Score=369, Expect=5e-121]} {Dmel: FBgn0033244, CG8726, [RH, Score=306, Expect=3e-96]} {Celegans: WBGene00008750, F13E9.1, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_4821_0_1, dd_Smed_v6_4821_0_1, [RH, Score=241, Expect=1e-72]} {RNA1509_9889} {RNA1310_10000.1, RNA1509_9889} {RNA1509_9889, RNA815_3386.1} Mlig455_060024 {REF} {Length: 2182} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=56.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=39.7]; Protein kinase domain [PF00069.27, score=37.5]; WH2 motif [PF02205.22, score=34.2]} {Human: ENSG00000168297, PXK, PX domain containing serine/threonine kinase like, [Score=354, Expect=1e-115]} {Mouse: ENSMUSG00000033885, Pxk, PX domain containing serine/threonine kinase, [Score=356, Expect=2e-116]} {Dmel: FBgn0033244, CG8726, [Score=298, Expect=2e-93]} {Celegans: WBGene00008750, F13E9.1, [Score=50.1, Expect=2e-06]} {Smed: dd_Smed_v6_4821_0_1, dd_Smed_v6_4821_0_1, [Score=239, Expect=5e-72]} {RNA1509_9889} {RNA1310_10000.1} {RNA815_3386.1}
3.	MligTC455_23258	1533	31.94	Mlig455_048752	Neo: - Age: -		0.969	-	-	-	0.969	-	-	Mlig455_048752 {REF} {Length: 2090} {TRANSSPLICED} {Pfam: Flagella accessory protein C (FlaC) [PF05377.13, score=19.2]; Weak chloroplast movement under blue light [PF05701.13, score=17.4]} {RNA1509_25043, RNA1509_30520, RNA1509_56657} {RNA1310_12993.1, RNA1509_30520, RNA1509_56657} {RNA1509_30520, RNA1509_56657, RNA815_2932.1}
4.	MligTC455_45438	986	20.55	Mlig455_030012	Neo: - Age: logFC(26M/2M)=0.167	EMC3	0.959	-	-	-	-	-	0.959	Mlig455_030012 {REF} {Length: 1714} {TRANSSPLICED} {Pfam: Integral membrane protein EMC3/TMCO1-like [PF01956.18, score=176.5]} {Human: ENSG00000125037, EMC3, ER membrane protein complex subunit 3, [RH, Score=341, Expect=3e-118]} {Mouse: ENSMUSG00000030286, Emc3, ER membrane protein complex subunit 3, [RH, Score=340, Expect=3e-118]} {Dmel: FBgn0032292, EMC3, ER Membrane protein Complex 3, [RH, Score=301, Expect=5e-103]} {Celegans: WBGene00013378, emc-3, ER membrane protein complex subunit 3, [RH, Score=290, Expect=8e-99]} {Smed: dd_Smed_v6_2461_0_1, dd_Smed_v6_2461_0_1, [RH, Score=347, Expect=3e-121]} {RNA1509_15506, RNA1509_19438, RNA1509_32461, RNA1509_4588, RNA1509_50485, RNA1509_55052} {RNA1310_16742, RNA1509_15506, RNA1509_19438, RNA1509_32461, RNA1509_4588, RNA1509_50485, RNA1509_55052} {RNA1509_15506, RNA1509_19438, RNA1509_32461, RNA1509_4588, RNA1509_50485, RNA1509_55052, RNA815_9638}

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