TomoSeq data search

Data search

Results for MligTC455_45445

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45445

591

12.31

Mlig455_056128, Mlig455_058766

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.353/0.00091

HENMT1

Mlig455_056128 {REF} {Length: 3476} {Human: ENSG00000162639, HENMT1, HEN methyltransferase 1, [RH, Score=164, Expect=8e-45]} {Mouse: ENSMUSG00000045662, Henmt1, HEN1 methyltransferase homolog 1 (Arabidopsis), [RH, Score=169, Expect=8e-47]} {Dmel: FBgn0033686, Hen1, Hen1 methyltransferase, [RH, Score=171, Expect=1e-47]} {Celegans: WBGene00015349, henn-1, HEN1 (RNA 3'end methyltransferase) of Nematode, [Score=86.7, Expect=6e-18]} {Smed: dd_Smed_v6_8622_0_2, dd_Smed_v6_8622_0_2, [Score=102, Expect=2e-23]} {RNA1509_44935} {RNA1310_6730.1} {RNA815_20992}

Mlig455_058766 {REF} {Length: 3271} {TRANSSPLICED} {Human: ENSG00000162639, HENMT1, HEN methyltransferase 1, [RH, Score=159, Expect=2e-43]} {Mouse: ENSMUSG00000045662, Henmt1, HEN1 methyltransferase homolog 1 (Arabidopsis), [RH, Score=166, Expect=2e-46]} {Dmel: FBgn0033686, Hen1, Hen1 methyltransferase, [Score=155, Expect=1e-41]} {Celegans: WBGene00015349, henn-1, HEN1 (RNA 3'end methyltransferase) of Nematode, [Score=85.5, Expect=2e-17]} {Smed: dd_Smed_v6_8622_0_2, dd_Smed_v6_8622_0_2, [Score=101, Expect=5e-23]} {RNA1509_44935, RNA1509_47744} {RNA1310_6730.1, RNA1509_47744} {RNA1509_47744, RNA815_15902}

Cumulative graph for MligTC455_45445

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.072	4.02	0.94979	1.00000
RegionR2	-0.142	4.02	0.78579	1.00000
RegionR3	0.479	4.02	0.23354	0.77562
RegionR4	0.573	4.02	0.22096	0.51026
RegionR5	1.353	4.02	0.00005	0.00091
RegionR6	0.208	4.02	0.61149	1.00000
RegionR7	-1.163	4.02	0.05318	0.44318
RegionR8	-1.235	4.02	0.08981	0.56680

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.481	4.02	0.77492	1.00000
RegenerationR2	-0.199	4.02	0.66055	0.94182
RegenerationR3	0.283	4.02	0.54080	0.87820
RegenerationR4	-0.016	4.02	0.97520	1.00000
RegenerationR5	-0.044	4.02	0.91639	1.00000
RegenerationR6	0.569	4.02	0.21992	0.56376
RegenerationBL	-1.275	4.02	0.15848	0.47677
RegenerationTP	0.432	4.02	0.56042	0.93909

Genes with expression patterns similar to MligTC455_45445

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45445	591	12.31	Mlig455_056128, Mlig455_058766	Neo: Int S/G2/M Age: - Region-enriched R5: 1.353/0.00091	HENMT1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_056128 {REF} {Length: 3476} {Human: ENSG00000162639, HENMT1, HEN methyltransferase 1, [RH, Score=164, Expect=8e-45]} {Mouse: ENSMUSG00000045662, Henmt1, HEN1 methyltransferase homolog 1 (Arabidopsis), [RH, Score=169, Expect=8e-47]} {Dmel: FBgn0033686, Hen1, Hen1 methyltransferase, [RH, Score=171, Expect=1e-47]} {Celegans: WBGene00015349, henn-1, HEN1 (RNA 3'end methyltransferase) of Nematode, [Score=86.7, Expect=6e-18]} {Smed: dd_Smed_v6_8622_0_2, dd_Smed_v6_8622_0_2, [Score=102, Expect=2e-23]} {RNA1509_44935} {RNA1310_6730.1} {RNA815_20992} Mlig455_058766 {REF} {Length: 3271} {TRANSSPLICED} {Human: ENSG00000162639, HENMT1, HEN methyltransferase 1, [RH, Score=159, Expect=2e-43]} {Mouse: ENSMUSG00000045662, Henmt1, HEN1 methyltransferase homolog 1 (Arabidopsis), [RH, Score=166, Expect=2e-46]} {Dmel: FBgn0033686, Hen1, Hen1 methyltransferase, [Score=155, Expect=1e-41]} {Celegans: WBGene00015349, henn-1, HEN1 (RNA 3'end methyltransferase) of Nematode, [Score=85.5, Expect=2e-17]} {Smed: dd_Smed_v6_8622_0_2, dd_Smed_v6_8622_0_2, [Score=101, Expect=5e-23]} {RNA1509_44935, RNA1509_47744} {RNA1310_6730.1, RNA1509_47744} {RNA1509_47744, RNA815_15902}
2.	MligTC455_30394	279	5.8	Mlig455_029592	Neo: - Age: -	ALDH18A1	2.44	0.754	-	-	-	0.720	0.966	Mlig455_029592 {REF} {Length: 2910} {TRANSSPLICED} {Pfam: Amino acid kinase family [PF00696.30, score=138.8]; Aldehyde dehydrogenase family [PF00171.24, score=56.3]} {Human: ENSG00000059573, ALDH18A1, aldehyde dehydrogenase 18 family member A1, [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000025007, Aldh18a1, aldehyde dehydrogenase 18 family, member A1, [RH, Score=858, Expect=0.0]} {Dmel: FBgn0037146, CG7470, [RH, Score=813, Expect=0.0]} {Celegans: WBGene00011938, alh-13, Probable delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase, [RH, Score=808, Expect=0.0]} {Smed: dd_Smed_v6_1060_0_1, dd_Smed_v6_1060_0_1, [RH, Score=915, Expect=0.0]} {RNA1509_1671, RNA1509_34684} {RNA1310_2413, RNA1509_34684} {RNA1509_34684, RNA815_1917}
3.	MligTC455_46293	388	8.09	Mlig455_024975	Neo: - Age: - Region-enriched R5: 1.866/0.00003	SLC17A9	1.897	-	-	0.934	-	-	0.963	Mlig455_024975 {REF} {Length: 2858} {Pfam: Major Facilitator Superfamily [PF07690.18, score=153.6]} {Human: ENSG00000101194, SLC17A9, solute carrier family 17 member 9, [RH, Score=313, Expect=5e-101]} {Mouse: ENSMUSG00000023393, Slc17a9, solute carrier family 17, member 9, [RH, Score=308, Expect=5e-99]} {Dmel: FBgn0025684, MFS18, Major Facilitator Superfamily Transporter 18, [RH, Score=334, Expect=5e-109]} {Celegans: WBGene00010758, vnut-1, Vesicular NUcleotide Transporte, [RH, Score=310, Expect=7e-100]} {Smed: dd_Smed_v6_1326_0_1, dd_Smed_v6_1326_0_1, [RH, Score=416, Expect=3e-141]} {RNA1509_7549} {RNA1310_6054.1} {RNA815_2086.1}
4.	MligTC455_22545	1507	31.39	Mlig455_014080, Mlig455_014110	Neo: - Age: Down-Up-Down Region-enriched R5: 1.770/0.00925		1.739	0.784	-	-	-	-	0.955	Mlig455_014080 {REF} {Length: 1230} {TRANSSPLICED} {Dmel: FBgn0259238, CG42336, [RH, Score=40.4, Expect=6e-06]} {Smed: dd_Smed_v6_1540_0_1, dd_Smed_v6_1540_0_1, [RH, Score=72.8, Expect=2e-18]} {RNA1509_9758} {RNA1310_27606} {RNA815_12165} Mlig455_014110 {REF} {Length: 1232} {TRANSSPLICED} {Dmel: FBgn0259238, CG42336, [RH, Score=40.4, Expect=6e-06]} {Smed: dd_Smed_v6_1540_0_1, dd_Smed_v6_1540_0_1, [RH, Score=72.8, Expect=2e-18]} {RNA1509_23771, RNA1509_7872, RNA1509_9758} {RNA1310_27606, RNA1509_23771, RNA1509_7872, RNA1509_9758} {RNA1509_23771, RNA1509_7872, RNA1509_9758, RNA815_12165}
5.	MligTC455_41687	1319	27.47	Mlig455_065436, Mlig455_067200	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.268 Region-specific R5: 1.722 Region-enriched R5: 1.741/0.00000	CRCP	1.686	-	-	0.735	-	-	0.951	Mlig455_065436 {REF} {Length: 524} {TRANSSPLICED} {Pfam: RNA polymerase Rpb4 [PF03874.18, score=73.8]} {Human: ENSG00000241258, CRCP, CGRP receptor component, [RH, Score=61.2, Expect=3e-12]} {Mouse: ENSMUSG00000025532, Crcp, calcitonin gene-related peptide-receptor component protein, [RH, Score=58.9, Expect=1e-11]} {RNA1509_24920} {RNA1310_66593} {RNA815_24495} Mlig455_067200 {REF} {Length: 524} {TRANSSPLICED} {Pfam: RNA polymerase Rpb4 [PF03874.18, score=73.8]} {Human: ENSG00000241258, CRCP, CGRP receptor component, [RH, Score=61.2, Expect=3e-12]} {Mouse: ENSMUSG00000025532, Crcp, calcitonin gene-related peptide-receptor component protein, [RH, Score=58.9, Expect=1e-11]} {RNA1509_24920, RNA1509_35655, RNA1509_40192} {RNA1310_66593, RNA1509_24920, RNA1509_35655, RNA1509_40192} {RNA1509_24920, RNA1509_35655, RNA1509_40192, RNA815_24495}
6.	MligTC455_49811	323	6.73	Mlig455_035309	Neo: Int S/G2/M Age: -	ASCC2	1.661	-	-	0.957	-	-	0.704	Mlig455_035309 {REF} {Length: 4782} {Pfam: CUE domain [PF02845.18, score=31.9]} {Human: ENSG00000100325, ASCC2, activating signal cointegrator 1 complex subunit 2, [Score=224, Expect=2e-61]} {Mouse: ENSMUSG00000020412, Ascc2, activating signal cointegrator 1 complex subunit 2, [Score=189, Expect=9e-50]} {Dmel: FBgn0024973, CG2701, [Score=82.8, Expect=8e-16]} {RNA1509_34484, RNA1509_7044} {RNA1310_7597, RNA1509_34484} {RNA1509_34484, RNA815_1952.1}
7.	MligTC455_07779	143	2.98	Mlig455_022087	Neo: - Age: Up-Down-Up	UBA3	0.976	-	-	-	-	-	0.976	Mlig455_022087 {REF} {Length: 2132} {TRANSSPLICED} {Human: ENSG00000144744, UBA3, ubiquitin like modifier activating enzyme 3, [Score=114, Expect=3e-30]} {Mouse: ENSMUSG00000030061, Uba3, ubiquitin-like modifier activating enzyme 3, [Score=111, Expect=2e-29]} {Dmel: FBgn0263697, Uba3, Ubiquitin activating enzyme 3, [Score=104, Expect=4e-27]} {Celegans: WBGene00004341, rfl-1, NEDD8-activating enzyme E1 catalytic subunit, [Score=100, Expect=8e-26]} {Smed: dd_Smed_v6_5739_0_1, dd_Smed_v6_5739_0_1, [Score=118, Expect=2e-32]} {RNA1509_32078} {RNA1310_15788.2} {RNA815_7861}
8.	MligTC455_07780	144	2.99	Mlig455_053625	Neo: - Age: -	UBA3	0.976	-	-	-	-	-	0.976	Mlig455_053625 {REF} {Length: 2608} {TRANSSPLICED} {Pfam: ThiF family [PF00899.23, score=193.1]; E2 binding domain [PF08825.12, score=37.3]; Ubiquitin/SUMO-activating enzyme ubiquitin-like domain [PF14732.8, score=23.1]} {Human: ENSG00000144744, UBA3, ubiquitin like modifier activating enzyme 3, [RH, Score=441, Expect=5e-152]} {Mouse: ENSMUSG00000030061, Uba3, ubiquitin-like modifier activating enzyme 3, [RH, Score=438, Expect=2e-151]} {Dmel: FBgn0263697, Uba3, Ubiquitin activating enzyme 3, [RH, Score=379, Expect=2e-128]} {Celegans: WBGene00004341, rfl-1, NEDD8-activating enzyme E1 catalytic subunit, [RH, Score=372, Expect=6e-126]} {Smed: dd_Smed_v6_5739_0_1, dd_Smed_v6_5739_0_1, [RH, Score=426, Expect=2e-147]} {RNA1509_12385, RNA1509_32078} {RNA1310_15788.2, RNA1509_12385, RNA1509_32078} {RNA1509_12385, RNA1509_32078, RNA815_7861}
9.	MligTC455_41946	495	10.32	Mlig455_024341	Neo: - Age: Up-Down-Down	UBE2A	0.971	-	-	-	-	-	0.971	Mlig455_024341 {REF} {Length: 1168} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=111.9]} {Human: ENSG00000077721, UBE2A, ubiquitin conjugating enzyme E2 A, [Score=150, Expect=2e-46]; ENSG00000119048, UBE2B, ubiquitin conjugating enzyme E2 B, [Score=146, Expect=4e-45]} {Mouse: ENSMUSG00000016308, Ube2a, ubiquitin-conjugating enzyme E2A, [Score=150, Expect=1e-46]; ENSMUSG00000020390, Ube2b, ubiquitin-conjugating enzyme E2B, [Score=146, Expect=3e-45]} {Dmel: FBgn0004436, Ubc6, Ubiquitin conjugating enzyme 6, [Score=150, Expect=6e-47]} {Celegans: WBGene00006701, ubc-1, Ubiquitin-conjugating enzyme E2 1, [Score=150, Expect=2e-46]} {Smed: dd_Smed_v6_6624_0_1, dd_Smed_v6_6624_0_1, [Score=145, Expect=2e-45]} {RNA1509_18366} {RNA1310_46419.1} {RNA815_14207.1}
10.	MligTC455_19864	394	8.21	Mlig455_054464	Neo: Irradiation Age: -		0.965	-	-	-	-	-	0.965	Mlig455_054464 {REF} {Length: 1970} {TRANSSPLICED} {Pfam: M-phase-specific PLK1-interacting protein [PF15502.8, score=31.4]} {RNA1509_10545} {RNA1310_33995} {RNA815_28759}
11.	MligTC455_24343	499	10.39	Mlig455_009796	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_009796 {REF} {Length: 1301} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_8336} {RNA1310_6765} {RNA815_10771}
12.	MligTC455_24421	426	8.87	Mlig455_043678	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_043678 {REF} {Length: 1868} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=39.6]} {Smed: dd_Smed_v6_9973_0_1, dd_Smed_v6_9973_0_1, [Score=47.8, Expect=2e-06]} {RNA1509_25048} {RNA1310_37030, RNA1509_25048} {RNA1509_25048, RNA815_28058}
13.	MligTC455_46292	444	9.24	Mlig455_024938	Neo: - Age: - Region-enriched R5: 2.279/0.00036	SLC17A9	0.96	-	-	-	-	-	0.960	Mlig455_024938 {REF} {Length: 2751} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=154.2]} {Human: ENSG00000101194, SLC17A9, solute carrier family 17 member 9, [RH, Score=314, Expect=2e-102]} {Mouse: ENSMUSG00000023393, Slc17a9, solute carrier family 17, member 9, [RH, Score=308, Expect=7e-100]} {Dmel: FBgn0025684, MFS18, Major Facilitator Superfamily Transporter 18, [RH, Score=333, Expect=4e-110]} {Celegans: WBGene00010758, vnut-1, Vesicular NUcleotide Transporte, [RH, Score=310, Expect=8e-101]} {Smed: dd_Smed_v6_1326_0_1, dd_Smed_v6_1326_0_1, [RH, Score=414, Expect=1e-141]} {RNA1509_48544, RNA1509_7549} {RNA1310_6054.1, RNA1509_48544, RNA1509_7549} {RNA1509_48544, RNA1509_7549, RNA815_2086.1}
14.	MligTC455_18439	230	4.79	Mlig455_006590	Neo: - Age: -	B3GNTL1	0.953	-	-	0.953	-	-	-	Mlig455_006590 {REF} {Length: 3108} {TRANSSPLICED} {Pfam: Flavin-binding monooxygenase-like [PF00743.21, score=102.4]; Glycosyl transferase family 2 [PF00535.28, score=76.4]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=46.2]; Glycosyltransferase like family 2 [PF10111.11, score=41.3]; Glycosyltransferase like family 2 [PF13641.8, score=41.0]; FAD dependent oxidoreductase [PF01266.26, score=34.2]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=31.2]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=27.3]; FAD-NAD(P)-binding [PF13454.8, score=27.3]; Glycosyl transferase family 2 [PF13704.8, score=21.2]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=20.7]; Thi4 family [PF01946.19, score=19.2]} {Human: ENSG00000175711, B3GNTL1, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1, [Score=367, Expect=2e-123]; ENSG00000277033, B3GNTL1, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1, [Score=367, Expect=2e-123]} {Mouse: ENSMUSG00000046605, B3gntl1, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1, [Score=361, Expect=5e-121]} {Dmel: FBgn0033079, Fmo-2, Flavin-containing monooxygenase 2, [Score=124, Expect=2e-30]} {Celegans: WBGene00008766, F13G3.6, [RH, Score=299, Expect=3e-97]} {Smed: dd_Smed_v6_9449_0_1, dd_Smed_v6_9449_0_1, [Score=125, Expect=5e-31]} {RNA1509_20392} {RNA1310_10017} {RNA815_9191}
15.	MligTC455_24344	433	9.03	Mlig455_057326	Neo: - Age: -	PFKFB1	0.952	-	-	-	-	-	0.952	Mlig455_057326 {REF} {Length: 2830} {Pfam: 6-phosphofructo-2-kinase [PF01591.20, score=201.1]; Histidine phosphatase superfamily (branch 1) [PF00300.24, score=133.7]} {Human: ENSG00000158571, PFKFB1, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, [Score=469, Expect=8e-161]; ENSG00000170525, PFKFB3, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, [Score=455, Expect=5e-155]; ENSG00000114268, PFKFB4, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, [Score=455, Expect=2e-155]; ENSG00000123836, PFKFB2, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2, [Score=448, Expect=3e-152]} {Mouse: ENSMUSG00000025271, Pfkfb1, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, [Score=470, Expect=7e-162]; ENSMUSG00000026773, Pfkfb3, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, [Score=462, Expect=2e-158]; ENSMUSG00000025648, Pfkfb4, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, [Score=456, Expect=4e-156]} {Dmel: FBgn0027621, Pfrx, 6-phosphofructo-2-kinase, [Score=427, Expect=7e-144]} {Celegans: WBGene00022456, pfkb-1.1, [Score=418, Expect=7e-142]} {Smed: dd_Smed_v6_3959_0_1, dd_Smed_v6_3959_0_1, [Score=477, Expect=2e-164]} {RNA1509_8336} {RNA1310_6765, RNA1509_8336} {RNA1509_8336, RNA815_4788.1}
16.	MligTC455_39435	360	7.5	Mlig455_028999	Neo: Irradiation Age: -		0.951	-	-	0.951	-	-	-	Mlig455_028999 {REF} {Length: 3461} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=23.6]} {Smed: dd_Smed_v6_12148_0_3, dd_Smed_v6_12148_0_3, [Score=73.2, Expect=6e-15]} {RNA1509_33209} {RNA1310_25936} {RNA815_11313}

Berezikov Lab - 2020-2021 © ERIBA