Data search
Results for MligTC455_39435
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39435 | 360 | 7.50 | Mlig455_028999 | Neo: Irradiation Age: - |
Mlig455_028999 {REF} {Length: 3461} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=23.6]} {Smed: dd_Smed_v6_12148_0_3, dd_Smed_v6_12148_0_3, [Score=73.2, Expect=6e-15]} {RNA1509_33209} {RNA1310_25936} {RNA815_11313} |
Cumulative graph for MligTC455_39435
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.087 | 3.233 | 0.36626 | 1.00000 | |
| RegionR2 | -0.341 | 3.233 | 0.59317 | 0.94555 | |
| RegionR3 | -0.352 | 3.233 | 0.48041 | 0.98275 | |
| RegionR4 | 0.065 | 3.233 | 0.91365 | 1.00000 | |
| RegionR5 | -0.179 | 3.233 | 0.68836 | 1.00000 | |
| RegionR6 | -0.003 | 3.233 | 0.99550 | 1.00000 | |
| RegionR7 | -0.429 | 3.233 | 0.51579 | 1.00000 | |
| RegionR8 | 0.153 | 3.233 | 0.83599 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.474 | 3.233 | 0.14748 | 0.88864 | |
| RegenerationR2 | 0.608 | 3.233 | 0.27270 | 0.71836 | |
| RegenerationR3 | 0.58 | 3.233 | 0.34902 | 0.76994 | |
| RegenerationR4 | -0.069 | 3.233 | 0.91458 | 1.00000 | |
| RegenerationR5 | 0.685 | 3.233 | 0.20644 | 0.63986 | |
| RegenerationR6 | -0.016 | 3.233 | 0.98042 | 1.00000 | |
| RegenerationBL | 0.759 | 3.233 | 0.26770 | 0.62683 | |
| RegenerationTP | 0.302 | 3.233 | 0.68967 | 1.00000 |
Genes with expression patterns similar to MligTC455_39435
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39435 | 360 | 7.5 | Mlig455_028999 | Neo: Irradiation Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028999 {REF} {Length: 3461} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=23.6]} {Smed: dd_Smed_v6_12148_0_3, dd_Smed_v6_12148_0_3, [Score=73.2, Expect=6e-15]} {RNA1509_33209} {RNA1310_25936} {RNA815_11313} | |
| 2. | MligTC455_33485 | 1296 | 27.01 | Mlig455_048627, Mlig455_048705, Mlig455_069750 | Neo: Neoblast |
1.72 | - | - | 0.951 | - | - | 0.769 | Mlig455_048627 {REF} {Length: 1569} {TRANSSPLICED} {RNA1509_18958, RNA1509_37074} {RNA1310_22957, RNA1509_18958, RNA1509_37074} {RNA1509_18958, RNA1509_37074, RNA815_949} Mlig455_048705 {REF} {Length: 1875} {RNA1509_37074} {RNA1310_22957} {RNA815_949} Mlig455_069750 {REF} {Length: 1555} {TRANSSPLICED} {RNA1509_27010, RNA1509_37074} {RNA1310_22957, RNA1509_27010} {RNA1509_27010, RNA815_949} |
|
| 3. | MligTC455_04649 | 148 | 3.09 | Mlig455_012005 | Neo: - Age: Down-Up-Down |
1.684 | - | - | - | - | 0.951 | 0.733 | Mlig455_012005 {REF} {Length: 1172} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1294) [PF06961.15, score=49.9]; Protein of unknown function (DUF3813) [PF12758.9, score=19.2]} {RNA1509_24502} {RNA1310_39703} {RNA815_42023} | |
| 4. | MligTC455_34795 | 776 | 16.16 | Mlig455_013273 | Neo: - Age: - |
PRKAG1 | 1.655 | - | - | - | - | 0.952 | 0.703 | Mlig455_013273 {REF} {Length: 4790} {Pfam: CBS domain [PF00571.30, score=107.2]} {Human: ENSG00000181929, PRKAG1, protein kinase AMP-activated non-catalytic subunit gamma 1, [RH, Score=385, Expect=1e-128]; ENSG00000106617, PRKAG2, protein kinase AMP-activated non-catalytic subunit gamma 2, [RH, Score=369, Expect=6e-119]} {Mouse: ENSMUSG00000067713, Prkag1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit, [RH, Score=384, Expect=5e-128]; ENSMUSG00000028944, Prkag2, protein kinase, AMP-activated, gamma 2 non-catalytic subunit, [RH, Score=370, Expect=3e-119]} {Dmel: FBgn0264357, SNF4Agamma, SNF4/AMP-activated protein kinase gamma subunit, [RH, Score=397, Expect=3e-122]} {Celegans: WBGene00013732, aakg-1, AMP-Activated protein Kinase Gamma subunit, [RH, Score=340, Expect=2e-105]} {Smed: dd_Smed_v6_4877_0_1, dd_Smed_v6_4877_0_1, [RH, Score=305, Expect=2e-97]} {RNA1509_9777} {RNA1310_4569, RNA1509_9777} {RNA1509_9777, RNA815_2038.1} |
| 5. | MligTC455_16284 | 1861 | 38.76 | Mlig455_054445, Mlig455_054474 | Neo: - Age: Down-Up-Down |
0.959 | - | - | - | - | 0.959 | - | Mlig455_054445 {REF} {Length: 1076} {RNA1509_29075} {RNA1310_15702.1} {RNA815_17368} Mlig455_054474 {REF} {Length: 1184} {RNA1509_29075} {RNA1310_15702.1} {RNA815_17368} |
|
| 6. | MligTC455_17855 | 1168 | 24.33 | Mlig455_015660 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.437/0.00054 |
IDH3A | 0.955 | - | 0.955 | - | - | - | - | Mlig455_015660 {REF} {Length: 2215} {TRANSSPLICED} {Pfam: Isocitrate/isopropylmalate dehydrogenase [PF00180.22, score=348.2]} {Human: ENSG00000166411, IDH3A, isocitrate dehydrogenase 3 (NAD(+)) alpha, [RH, Score=499, Expect=9e-178]} {Mouse: ENSMUSG00000032279, Idh3a, isocitrate dehydrogenase 3 (NAD+) alpha, [RH, Score=500, Expect=2e-178]} {Dmel: FBgn0027291, l(1)G0156, lethal (1) G0156, [RH, Score=534, Expect=0.0]} {Celegans: WBGene00009664, idha-1, Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, [RH, Score=522, Expect=0.0]} {Smed: dd_Smed_v6_3887_0_1, dd_Smed_v6_3887_0_1, [RH, Score=535, Expect=0.0]} {RNA1509_38913, RNA1509_6552} {RNA1310_24277, RNA1509_38913, RNA1509_6552} {RNA1509_38913, RNA1509_6552, RNA815_10143} |
| 7. | MligTC455_45445 | 591 | 12.31 | Mlig455_056128, Mlig455_058766 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.353/0.00091 |
HENMT1 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_056128 {REF} {Length: 3476} {Human: ENSG00000162639, HENMT1, HEN methyltransferase 1, [RH, Score=164, Expect=8e-45]} {Mouse: ENSMUSG00000045662, Henmt1, HEN1 methyltransferase homolog 1 (Arabidopsis), [RH, Score=169, Expect=8e-47]} {Dmel: FBgn0033686, Hen1, Hen1 methyltransferase, [RH, Score=171, Expect=1e-47]} {Celegans: WBGene00015349, henn-1, HEN1 (RNA 3'end methyltransferase) of Nematode, [Score=86.7, Expect=6e-18]} {Smed: dd_Smed_v6_8622_0_2, dd_Smed_v6_8622_0_2, [Score=102, Expect=2e-23]} {RNA1509_44935} {RNA1310_6730.1} {RNA815_20992} Mlig455_058766 {REF} {Length: 3271} {TRANSSPLICED} {Human: ENSG00000162639, HENMT1, HEN methyltransferase 1, [RH, Score=159, Expect=2e-43]} {Mouse: ENSMUSG00000045662, Henmt1, HEN1 methyltransferase homolog 1 (Arabidopsis), [RH, Score=166, Expect=2e-46]} {Dmel: FBgn0033686, Hen1, Hen1 methyltransferase, [Score=155, Expect=1e-41]} {Celegans: WBGene00015349, henn-1, HEN1 (RNA 3'end methyltransferase) of Nematode, [Score=85.5, Expect=2e-17]} {Smed: dd_Smed_v6_8622_0_2, dd_Smed_v6_8622_0_2, [Score=101, Expect=5e-23]} {RNA1509_44935, RNA1509_47744} {RNA1310_6730.1, RNA1509_47744} {RNA1509_47744, RNA815_15902} |
| 8. | MligTC455_47245 | 73 | 1.52 | Mlig455_027393 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_027393 {REF} {Length: 1984} {Dmel: FBgn0034267, CG4984, [Score=52.4, Expect=1e-07]} {RNA1310_36758} {RNA815_27905} |
Berezikov Lab - 2020-2021 © ERIBA