TomoSeq data search

Data search

Results for MligTC455_45675

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45675	3116	64.92	Mlig455_022997, Mlig455_027768, Mlig455_027770	Neo: - Age: Down-Up-Down Region-enriched R2: 1.098/0.02894	TPM1	Mlig455_022997 {REF} {Length: 1731} {Pfam: Tropomyosin [PF00261.22, score=228.3]; Tropomyosin like [PF12718.9, score=104.2]; Crescentin protein [PF19220.2, score=20.6]; Mechanosensitive ion channel porin domain [PF12795.9, score=19.1]; Protein of unknown function (DUF1664) [PF07889.14, score=18.7]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=187, Expect=4e-57]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=187, Expect=3e-57]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=197, Expect=2e-61]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=196, Expect=7e-61]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=235, Expect=2e-76]} {RNA1509_26725} {RNA1310_28577.3} {RNA815_21582} Mlig455_027768 {REF} {Length: 1729} {Pfam: Tropomyosin [PF00261.22, score=228.3]; Tropomyosin like [PF12718.9, score=104.2]; Crescentin protein [PF19220.2, score=20.6]; Mechanosensitive ion channel porin domain [PF12795.9, score=19.1]; Protein of unknown function (DUF1664) [PF07889.14, score=18.7]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=187, Expect=4e-57]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=187, Expect=3e-57]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=197, Expect=2e-61]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=196, Expect=7e-61]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=235, Expect=2e-76]} {RNA1509_26725} {RNA1310_28577.3} {RNA815_21582} Mlig455_027770 {REF} {Length: 2135} {NoTransDecoderORF} {RNA1509_15793, RNA1509_53058} {RNA1310_36443, RNA1509_53058} {RNA1509_53058, RNA815_26190}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45675

3116

64.92

Mlig455_022997, Mlig455_027768, Mlig455_027770

Neo: -

Age: Down-Up-Down

Region-enriched R2: 1.098/0.02894

TPM1

Mlig455_022997 {REF} {Length: 1731} {Pfam: Tropomyosin [PF00261.22, score=228.3]; Tropomyosin like [PF12718.9, score=104.2]; Crescentin protein [PF19220.2, score=20.6]; Mechanosensitive ion channel porin domain [PF12795.9, score=19.1]; Protein of unknown function (DUF1664) [PF07889.14, score=18.7]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=187, Expect=4e-57]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=187, Expect=3e-57]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=197, Expect=2e-61]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=196, Expect=7e-61]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=235, Expect=2e-76]} {RNA1509_26725} {RNA1310_28577.3} {RNA815_21582}

Mlig455_027768 {REF} {Length: 1729} {Pfam: Tropomyosin [PF00261.22, score=228.3]; Tropomyosin like [PF12718.9, score=104.2]; Crescentin protein [PF19220.2, score=20.6]; Mechanosensitive ion channel porin domain [PF12795.9, score=19.1]; Protein of unknown function (DUF1664) [PF07889.14, score=18.7]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=187, Expect=4e-57]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=187, Expect=3e-57]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=197, Expect=2e-61]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=196, Expect=7e-61]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=235, Expect=2e-76]} {RNA1509_26725} {RNA1310_28577.3} {RNA815_21582}

Mlig455_027770 {REF} {Length: 2135} {NoTransDecoderORF} {RNA1509_15793, RNA1509_53058} {RNA1310_36443, RNA1509_53058} {RNA1509_53058, RNA815_26190}

Cumulative graph for MligTC455_45675

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.292	6.137	0.00337	0.18549
RegionR2	1.098	6.137	0.00151	0.02894
RegionR3	0.706	6.137	0.01755	0.21843
RegionR4	0.606	6.137	0.10719	0.32227
RegionR5	-0.434	6.137	0.17774	0.45273
RegionR6	0.772	6.137	0.01152	0.18338
RegionR7	-0.413	6.137	0.27395	0.90493
RegionR8	-0.043	6.137	0.92225	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.193	6.137	0.23508	0.96499
RegenerationR2	-0.325	6.137	0.33292	0.76928
RegenerationR3	-0.203	6.137	0.56351	0.89097
RegenerationR4	-0.397	6.137	0.30361	0.74523
RegenerationR5	-0.096	6.137	0.79536	0.98738
RegenerationR6	-0.861	6.137	0.02026	0.17582
RegenerationBL	-0.13	6.137	0.71677	1.00000
RegenerationTP	0.864	6.137	0.01953	0.23943

Genes with expression patterns similar to MligTC455_45675

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45675	3116	64.92	Mlig455_022997, Mlig455_027768, Mlig455_027770	Neo: - Age: Down-Up-Down Region-enriched R2: 1.098/0.02894	TPM1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_022997 {REF} {Length: 1731} {Pfam: Tropomyosin [PF00261.22, score=228.3]; Tropomyosin like [PF12718.9, score=104.2]; Crescentin protein [PF19220.2, score=20.6]; Mechanosensitive ion channel porin domain [PF12795.9, score=19.1]; Protein of unknown function (DUF1664) [PF07889.14, score=18.7]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=187, Expect=4e-57]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=187, Expect=3e-57]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=197, Expect=2e-61]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=196, Expect=7e-61]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=235, Expect=2e-76]} {RNA1509_26725} {RNA1310_28577.3} {RNA815_21582} Mlig455_027768 {REF} {Length: 1729} {Pfam: Tropomyosin [PF00261.22, score=228.3]; Tropomyosin like [PF12718.9, score=104.2]; Crescentin protein [PF19220.2, score=20.6]; Mechanosensitive ion channel porin domain [PF12795.9, score=19.1]; Protein of unknown function (DUF1664) [PF07889.14, score=18.7]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=187, Expect=4e-57]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=187, Expect=3e-57]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=197, Expect=2e-61]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=196, Expect=7e-61]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=235, Expect=2e-76]} {RNA1509_26725} {RNA1310_28577.3} {RNA815_21582} Mlig455_027770 {REF} {Length: 2135} {NoTransDecoderORF} {RNA1509_15793, RNA1509_53058} {RNA1310_36443, RNA1509_53058} {RNA1509_53058, RNA815_26190}
2.	MligTC455_48905	3322	69.2	Mlig455_054101	Neo: - Age: logFC(26M/2M)=-0.438	CCDC113	2.792	-	-	0.920	0.954	-	0.918	Mlig455_054101 {REF} {Length: 1417} {Pfam: Domain of unknown function (DUF4201) [PF13870.8, score=145.0]} {Human: ENSG00000103021, CCDC113, coiled-coil domain containing 113, [RH, Score=204, Expect=2e-61]} {Mouse: ENSMUSG00000036598, Ccdc113, coiled-coil domain containing 113, [RH, Score=212, Expect=6e-65]} {Dmel: FBgn0031235, CG13693, [RH, Score=67.4, Expect=6e-12]} {Smed: dd_Smed_v6_11884_0_1, dd_Smed_v6_11884_0_1, [RH, Score=325, Expect=3e-109]} {RNA1509_22414, RNA1509_4108} {RNA1310_19439, RNA1509_22414, RNA1509_4108} {RNA1509_22414, RNA1509_4108, RNA815_8863}
3.	MligTC455_19236	1684	35.09	Mlig455_039926	Neo: - Age: -	KDM8	2.614	-	-	0.855	0.789	0.970	-	Mlig455_039926 {REF} {Length: 3994} {Pfam: Cupin-like domain [PF13621.8, score=106.1]; EF hand [PF13202.8, score=27.3]; EF hand [PF00036.34, score=23.9]; EF-hand domain pair [PF13499.8, score=21.5]} {Human: ENSG00000155666, KDM8, lysine demethylase 8, [Score=63.2, Expect=4e-10]} {Mouse: ENSMUSG00000030752, Kdm8, lysine (K)-specific demethylase 8, [Score=63.9, Expect=1e-10]} {Dmel: FBgn0035166, CG13902, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_11273_0_1, dd_Smed_v6_11273_0_1, [Score=224, Expect=1e-68]} {RNA1509_36468, RNA1509_6200} {RNA1310_20380, RNA1509_36468} {RNA1509_36468, RNA815_8139}
4.	MligTC455_33001	2993	62.36	Mlig455_021328	Neo: - Age: Down-Down-Up Regeneration-downregulated BL: -1.699 Regeneration-depleted BL: -1.699	PLSCR1	2.572	-	0.963	-	0.725	0.884	-	Mlig455_021328 {REF} {Length: 1467} {Pfam: Scramblase [PF03803.17, score=250.1]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=218, Expect=1e-69]} {Mouse: ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [Score=216, Expect=9e-69]; ENSMUSG00000032372, Plscr2, phospholipid scramblase 2, [Score=212, Expect=2e-67]} {Dmel: FBgn0035390, scramb2, scramblase 2, [RH, Score=223, Expect=2e-72]} {Celegans: WBGene00014200, scrm-2, Phospholipid scramblase, [Score=197, Expect=1e-62]} {Smed: dd_Smed_v6_16813_0_1, dd_Smed_v6_16813_0_1, [Score=279, Expect=4e-94]} {RNA1509_23323, RNA1509_2687} {RNA1310_25112, RNA1509_23323, RNA1509_2687} {RNA1509_23323, RNA1509_2687, RNA815_11532}
5.	MligTC455_44550	595	12.4	Mlig455_001042, Mlig455_064188	Neo: - Age: - Region-enriched R2: 1.767/0.00669		1.742	-	0.775	-	-	0.967	-	Mlig455_001042 {REF} {Length: 1025} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_54939} {RNA1310_71265} {RNA815_23073} Mlig455_064188 {REF} {Length: 1039} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_54939} {RNA1310_71265, RNA1509_54939} {RNA1509_54939, RNA815_23073}
6.	MligTC455_41582	148	3.09	Mlig455_001197	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_001197 {REF} {Length: 527} {NoTransDecoderORF} {RNA1509_12950} {RNA1310_4155.2} {RNA815_30817}
7.	MligTC455_41307	105	2.19	Mlig455_020562, Mlig455_044513	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_020562 {REF} {Length: 1560} {Pfam: BTB/POZ domain [PF00651.33, score=40.4]; BTB And C-terminal Kelch [PF07707.17, score=24.5]} {RNA1310_49711} {RNA815_52465} Mlig455_044513 {REF} {Length: 1375} {Pfam: BTB/POZ domain [PF00651.33, score=40.0]; BTB And C-terminal Kelch [PF07707.17, score=19.3]} {RNA1310_49711} {RNA815_52465}