Data search


search
Exact
Search

Results for MligTC455_19236

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19236 1684 35.09 Mlig455_039926

Neo: -

Age: -

KDM8 Mlig455_039926 {REF} {Length: 3994} {Pfam: Cupin-like domain [PF13621.8, score=106.1]; EF hand [PF13202.8, score=27.3]; EF hand [PF00036.34, score=23.9]; EF-hand domain pair [PF13499.8, score=21.5]} {Human: ENSG00000155666, KDM8, lysine demethylase 8, [Score=63.2, Expect=4e-10]} {Mouse: ENSMUSG00000030752, Kdm8, lysine (K)-specific demethylase 8, [Score=63.9, Expect=1e-10]} {Dmel: FBgn0035166, CG13902, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_11273_0_1, dd_Smed_v6_11273_0_1, [Score=224, Expect=1e-68]} {RNA1509_36468, RNA1509_6200} {RNA1310_20380, RNA1509_36468} {RNA1509_36468, RNA815_8139}

Cumulative graph for MligTC455_19236

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.96 5.319 0.26360 0.91339
RegionR2 0.478 5.319 0.15715 0.49582
RegionR3 -0.017 5.319 0.95630 1.00000
RegionR4 0.287 5.319 0.42382 0.75178
RegionR5 -0.781 5.319 0.01376 0.07317
RegionR6 0.042 5.319 0.88978 1.00000
RegionR7 0.472 5.319 0.18586 0.78694
RegionR8 0.48 5.319 0.28000 0.90532

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.218 5.319 0.86205 1.00000
RegenerationR2 0.371 5.319 0.22324 0.67080
RegenerationR3 0.211 5.319 0.53018 0.87202
RegenerationR4 0.157 5.319 0.65120 0.93400
RegenerationR5 0.539 5.319 0.11602 0.51233
RegenerationR6 0.058 5.319 0.86811 1.00000
RegenerationBL 0.167 5.319 0.63199 0.97281
RegenerationTP 0.049 5.319 0.89937 1.00000


Genes with expression patterns similar to MligTC455_19236

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19236 1684 35.09 Mlig455_039926

Neo: -

Age: -

KDM8 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_039926 {REF} {Length: 3994} {Pfam: Cupin-like domain [PF13621.8, score=106.1]; EF hand [PF13202.8, score=27.3]; EF hand [PF00036.34, score=23.9]; EF-hand domain pair [PF13499.8, score=21.5]} {Human: ENSG00000155666, KDM8, lysine demethylase 8, [Score=63.2, Expect=4e-10]} {Mouse: ENSMUSG00000030752, Kdm8, lysine (K)-specific demethylase 8, [Score=63.9, Expect=1e-10]} {Dmel: FBgn0035166, CG13902, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_11273_0_1, dd_Smed_v6_11273_0_1, [Score=224, Expect=1e-68]} {RNA1509_36468, RNA1509_6200} {RNA1310_20380, RNA1509_36468} {RNA1509_36468, RNA815_8139}
2. MligTC455_45675 3116 64.92 Mlig455_022997, Mlig455_027768, Mlig455_027770

Neo: -

Age: Down-Up-Down

Region-enriched R2: 1.098/0.02894

TPM1 2.614 - - 0.855 0.789 0.970 -

Mlig455_022997 {REF} {Length: 1731} {Pfam: Tropomyosin [PF00261.22, score=228.3]; Tropomyosin like [PF12718.9, score=104.2]; Crescentin protein [PF19220.2, score=20.6]; Mechanosensitive ion channel porin domain [PF12795.9, score=19.1]; Protein of unknown function (DUF1664) [PF07889.14, score=18.7]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=187, Expect=4e-57]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=187, Expect=3e-57]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=197, Expect=2e-61]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=196, Expect=7e-61]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=235, Expect=2e-76]} {RNA1509_26725} {RNA1310_28577.3} {RNA815_21582}

Mlig455_027768 {REF} {Length: 1729} {Pfam: Tropomyosin [PF00261.22, score=228.3]; Tropomyosin like [PF12718.9, score=104.2]; Crescentin protein [PF19220.2, score=20.6]; Mechanosensitive ion channel porin domain [PF12795.9, score=19.1]; Protein of unknown function (DUF1664) [PF07889.14, score=18.7]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=187, Expect=4e-57]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=187, Expect=3e-57]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=197, Expect=2e-61]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=196, Expect=7e-61]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=235, Expect=2e-76]} {RNA1509_26725} {RNA1310_28577.3} {RNA815_21582}

Mlig455_027770 {REF} {Length: 2135} {NoTransDecoderORF} {RNA1509_15793, RNA1509_53058} {RNA1310_36443, RNA1509_53058} {RNA1509_53058, RNA815_26190}
3. MligTC455_18954 970 20.2 Mlig455_012818

Neo: -

Age: Down-Up-Up

2.525 - - - 0.774 0.957 0.794 Mlig455_012818 {REF} {Length: 1632} {Smed: dd_Smed_v6_5259_0_1, dd_Smed_v6_5259_0_1, [RH, Score=55.5, Expect=1e-09]} {RNA1509_36783, RNA1509_40417, RNA1509_59402} {RNA1310_20651.1, RNA1509_36783, RNA1509_40417, RNA1509_59402} {RNA1509_36783, RNA1509_40417, RNA1509_59402, RNA815_9212.1}
4. MligTC455_09653 51 1.06 Mlig455_044944

Neo: -

Age: -

SLC17A6 2.513 - - - 0.806 0.953 0.754 Mlig455_044944 {REF} {Length: 2769} {Pfam: Major Facilitator Superfamily [PF07690.18, score=118.9]} {Human: ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [Score=260, Expect=4e-79]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [Score=248, Expect=1e-74]} {Mouse: ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=259, Expect=8e-79]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [Score=249, Expect=3e-75]; ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [Score=248, Expect=2e-74]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [Score=223, Expect=1e-64]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [Score=203, Expect=2e-58]} {Smed: dd_Smed_v6_21295_0_1, dd_Smed_v6_21295_0_1, [RH, Score=616, Expect=0.0]} {RNA1310_79790} {RNA815_45443}
5. MligTC455_49002 1240 25.84 Mlig455_023460

Neo: -

Age: -

2.415 - - - 0.710 0.755 0.950 Mlig455_023460 {REF} {Length: 3425} {Pfam: Cupin-like domain [PF13621.8, score=42.3]} {Dmel: FBgn0038510, CG14331, [Score=164, Expect=4e-48]} {Celegans: WBGene00004205, psr-1, Bifunctional arginine demethylase and lysyl-hydroxylase psr-1, [Score=57.8, Expect=3e-09]} {Smed: dd_Smed_v6_8235_0_1, dd_Smed_v6_8235_0_1, [Score=163, Expect=2e-47]} {RNA1509_22854} {RNA1310_16345.2, RNA1509_22854} {RNA1509_22854, RNA815_11283}
6. MligTC455_25313 529 11.03 Mlig455_047806, Mlig455_047883

Neo: -

Age: Up-Down-Down

PCLO 1.796 - - - - 0.991 0.805

Mlig455_047806 {REF} {Length: 4640} {Pfam: C2 domain [PF00168.32, score=102.8]; PDZ domain [PF17820.3, score=23.7]} {Human: ENSG00000186472, PCLO, piccolo presynaptic cytomatrix protein, [Score=115, Expect=2e-25]} {Mouse: ENSMUSG00000061601, Pclo, piccolo (presynaptic cytomatrix protein), [RH, Score=117, Expect=4e-26]} {Dmel: FBgn0003091, Pkc53E, Protein C kinase 53E, [Score=83.2, Expect=4e-16]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [Score=79.0, Expect=7e-15]} {Smed: dd_Smed_v6_9615_0_2, dd_Smed_v6_9615_0_2, [RH, Score=198, Expect=2e-52]} {RNA1509_12877} {RNA1310_21392} {RNA815_8186}

Mlig455_047883 {REF} {Length: 3110} {Smed: dd_Smed_v6_9615_0_2, dd_Smed_v6_9615_0_2, [RH, Score=192, Expect=2e-55]} {RNA1509_12877} {RNA1310_21392} {RNA815_8186}
7. MligTC455_43672 602 12.54 Mlig455_067100

Neo: -

Age: -

1.793 - - - - 0.841 0.952 Mlig455_067100 {REF} {Length: 2322} {Pfam: Family of unknown function (DUF6328) [PF19853.1, score=18.9]} {RNA1509_54455} {RNA1310_28362, RNA1509_54455} {RNA1509_54455, RNA815_15060}
8. MligTC455_35435 632 13.16 Mlig455_067119

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.896

Region-enriched R2: 1.234/0.03490

Regeneration-downregulated R5: -1.845

Regeneration-depleted R5: -1.845

1.771 - - - - 0.956 0.815 Mlig455_067119 {REF} {Length: 1795} {RNA1509_9585} {RNA1310_17157, RNA1509_9585} {RNA1509_9585, RNA815_623.1}
9. MligTC455_15674 2877 59.94 Mlig455_064112

Neo: -

Age: Down-Up-Down

LKAAEAR1 1.755 - - - - 0.790 0.965 Mlig455_064112 {REF} {Length: 1020} {Pfam: Family of unknown function with LKAAEAR motif [PF15478.8, score=102.2]} {Human: ENSG00000171695, LKAAEAR1, LKAAEAR motif containing 1, [RH, Score=47.0, Expect=2e-06]} {Smed: dd_Smed_v6_8554_0_1, dd_Smed_v6_8554_0_1, [RH, Score=102, Expect=1e-28]} {RNA1509_12943, RNA1509_8205} {RNA1310_37956, RNA1509_12943, RNA1509_8205} {RNA1509_12943, RNA1509_8205, RNA815_16434.2}
10. MligTC455_16641 1524 31.75 Mlig455_043685, Mlig455_043752, Mlig455_047473

Neo: -

Age: Down-Up-Up

Region-enriched R8: 2.371/0.00579

1.755 - - - - 0.803 0.952

Mlig455_043685 {REF} {Length: 1558} {Pfam: Domain of unknown function (DUF4735) [PF15882.7, score=104.2]} {Smed: dd_Smed_v6_13989_0_1, dd_Smed_v6_13989_0_1, [Score=60.1, Expect=6e-10]} {RNA1509_51030} {RNA1310_23381} {RNA815_11328}

Mlig455_043752 {REF} {Length: 1659} {Pfam: Domain of unknown function (DUF4735) [PF15882.7, score=104.5]} {Smed: dd_Smed_v6_13989_0_1, dd_Smed_v6_13989_0_1, [Score=59.3, Expect=1e-09]} {RNA1509_51030} {RNA1310_23381} {RNA815_11328}

Mlig455_047473 {REF} {Length: 1659} {Pfam: Domain of unknown function (DUF4735) [PF15882.7, score=104.5]} {Smed: dd_Smed_v6_13989_0_1, dd_Smed_v6_13989_0_1, [Score=59.3, Expect=1e-09]} {RNA1509_18230, RNA1509_43643, RNA1509_51030} {RNA1310_23381, RNA1509_18230, RNA1509_43643, RNA1509_51030} {RNA1509_18230, RNA1509_43643, RNA1509_51030, RNA815_11328}
11. MligTC455_31446 1599 33.32 Mlig455_068361

Neo: -

Age: logFC(26M/2M)=-0.373

1.731 - - - - 0.776 0.955 Mlig455_068361 {REF} {Length: 2059} {Pfam: Testis-expressed sequence 33 protein family [PF15400.8, score=59.8]} {RNA1509_14252, RNA1509_53522, RNA1509_58303} {RNA1310_18609, RNA1509_14252, RNA1509_53522, RNA1509_58303} {RNA1509_14252, RNA1509_53522, RNA1509_58303, RNA815_8953.1}
12. MligTC455_27801 113 2.36 Mlig455_033476

Neo: -

Age: -

PLCH2 1.696 - - - - 0.961 0.735 Mlig455_033476 {REF} {Length: 8788} {Pfam: Phosphatidylinositol-specific phospholipase C, X domain [PF00388.21, score=200.3]; Phosphatidylinositol-specific phospholipase C, Y domain [PF00387.21, score=106.2]; RasGEF domain [PF00617.21, score=54.0]; Ras association (RalGDS/AF-6) domain [PF00788.25, score=39.7]; C2 domain [PF00168.32, score=29.3]} {Human: ENSG00000149527, PLCH2, phospholipase C eta 2, [Score=326, Expect=4e-90]; ENSG00000276429, PLCH2, phospholipase C eta 2, [Score=326, Expect=4e-90]; ENSG00000101333, PLCB4, phospholipase C beta 4, [Score=325, Expect=1e-90]} {Mouse: ENSMUSG00000024998, Plce1, phospholipase C, epsilon 1, [RH, Score=282, Expect=1e-75]} {Dmel: FBgn0003416, sl, small wing, [Score=164, Expect=3e-40]} {Celegans: WBGene00004036, plc-1, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1, [Score=432, Expect=6e-123]} {Smed: dd_Smed_v6_9716_1_1, dd_Smed_v6_9716_1_1, [Score=752, Expect=0.0]} {RNA1509_26054} {RNA1310_1143.2} {RNA815_10233}
13. MligTC455_41757 2210 46.04 Mlig455_067601

Neo: -

Age: Down-Down-Up

1.679 - - - - 0.728 0.951 Mlig455_067601 {REF} {Length: 2908} {Pfam: Thymosin beta-4 family [PF01290.22, score=118.1]} {Dmel: FBgn0026084, cib, ciboulot, [RH, Score=58.5, Expect=6e-11]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=45.8, Expect=3e-06]} {Smed: dd_Smed_v6_17_0_1, dd_Smed_v6_17_0_1, [Score=73.9, Expect=5e-17]} {RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771} {RNA1310_19846.1, RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771} {RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771, RNA815_7395.2}
14. MligTC455_38227 131 2.73 Mlig455_049364

Neo: -

Age: Down-Up-Up

Region-enriched R2: 5.468/0.02435

0.966 - - - - 0.966 - Mlig455_049364 {REF} {Length: 726} {RNA1509_22173} {RNA1310_65747} {RNA815_15489}
15. MligTC455_06614 35 0.72 Mlig455_052447

Neo: -

Age: -

0.958 - - - - 0.958 - Mlig455_052447 {REF} {Length: 869} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_20081} {RNA1310_65601} {RNA815_26807}
16. MligTC455_13977 1496 31.16 Mlig455_039726

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.608

CXorf65 0.958 - - - - - 0.958 Mlig455_039726 {REF} {Length: 962} {Pfam: Putative Interleukin 2 receptor, gamma chain [PF15874.7, score=76.8]} {Human: ENSG00000204165, CXorf65, chromosome X open reading frame 65, [RH, Score=52.0, Expect=3e-08]} {Mouse: ENSMUSG00000090141, Gm614, predicted gene 614, [RH, Score=53.9, Expect=4e-09]} {RNA1509_44868, RNA1509_8992} {RNA1310_45539.1, RNA1509_44868, RNA1509_8992} {RNA1509_44868, RNA1509_8992, RNA815_12228}
17. MligTC455_09823 198 4.12 Mlig455_060176, Mlig455_067096

Neo: -

Age: logFC(26M/2M)=-0.746

0.956 - - - - 0.956 -

Mlig455_060176 {REF} {Length: 1969} {RNA1509_16354} {RNA1310_14269} {RNA815_19496}

Mlig455_067096 {REF} {Length: 1963} {RNA1509_16354} {RNA1310_14269} {RNA815_19496}
18. MligTC455_19469 1933 40.28 Mlig455_033867

Neo: -

Age: Down-Up-Down

GLRX 0.955 - - - - - 0.955 Mlig455_033867 {REF} {Length: 644} {TRANSSPLICED} {Pfam: Glutaredoxin [PF00462.26, score=31.4]} {Human: ENSG00000173221, GLRX, glutaredoxin, [Score=57.0, Expect=2e-11]} {Mouse: ENSMUSG00000021591, Glrx, glutaredoxin, [RH, Score=58.2, Expect=7e-12]} {Dmel: FBgn0036820, Grx1, Glutaredoxin 1, [Score=53.9, Expect=3e-10]} {Celegans: WBGene00021331, glrx-10, GLutaRedoXin, [Score=66.6, Expect=2e-15]} {Smed: dd_Smed_v6_4565_0_1, dd_Smed_v6_4565_0_1, [RH, Score=83.2, Expect=5e-22]} {RNA1509_44650} {RNA1310_53861.1, RNA1509_44650} {RNA1509_44650, RNA815_27537}
19. MligTC455_14157 547 11.4 Mlig455_049362, Mlig455_062304

Neo: -

Age: Down-Up-Down

0.951 - - - 0.951 - -

Mlig455_049362 {REF} {Length: 786} {TRANSSPLICED} {NoTransDecoderORF} {tRNA: Asn(GTT),pseudo, score=23.4} {RNA1509_48226} {RNA1310_8368.1} {RNA815_11031}

Mlig455_062304 {REF} {Length: 790} {TRANSSPLICED} {NoTransDecoderORF} {tRNA: Asn(GTT),pseudo, score=23.4} {RNA1509_23261, RNA1509_48226} {RNA1310_8368.1, RNA1509_23261, RNA1509_48226} {RNA1509_23261, RNA1509_48226, RNA815_11031}
20. MligTC455_29510 1443 30.06 Mlig455_003367, Mlig455_003369

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.360

Region-enriched R8: 1.897/0.00063
Region-enriched R7: 1.375/0.01086

Regeneration-downregulated BL: -2.492

Regeneration-depleted BL: -2.492

0.951 - - - - 0.951 -

Mlig455_003367 {REF} {Length: 1906} {Pfam: Interferon-induced 6-16 family [PF06140.15, score=25.4]} {RNA1509_46297} {RNA1310_31671} {RNA815_28401}

Mlig455_003369 {REF} {Length: 1024} {RNA1509_28087, RNA1509_46297} {RNA1310_31671, RNA1509_28087, RNA1509_46297} {RNA1509_28087, RNA1509_46297, RNA815_17641.1}
21. MligTC455_51102 2461 51.27 Mlig455_007334, Mlig455_066652

Neo: Irradiation

Age: -

Region-enriched R5: 1.980/0.00041

MLPH 0.95 - - - 0.950 - -

Mlig455_007334 {REF} {Length: 3741} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=97.9]; FYVE-type zinc finger [PF02318.18, score=82.0]; Immunoglobulin domain [PF13927.8, score=61.8]; Immunoglobulin V-set domain [PF07686.19, score=19.8]; Immunoglobulin domain [PF13895.8, score=19.0]} {Human: ENSG00000115648, MLPH, melanophilin, [RH, Score=106, Expect=2e-23]; ENSG00000170011, MYRIP, myosin VIIA and Rab interacting protein, [RH, Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000026303, Mlph, melanophilin, [RH, Score=105, Expect=8e-23]; ENSMUSG00000041794, Myrip, myosin VIIA and Rab interacting protein, [RH, Score=100, Expect=5e-21]} {Dmel: FBgn0086906, sls, sallimus, [Score=80.9, Expect=6e-15]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=78.2, Expect=3e-14]} {Smed: dd_Smed_v6_7945_0_1, dd_Smed_v6_7945_0_1, [RH, Score=99.8, Expect=3e-21]} {RNA1509_35433, RNA1509_3815, RNA1509_46233} {RNA1310_3147.1, RNA1509_35433, RNA1509_3815, RNA1509_46233} {RNA1509_35433, RNA1509_3815, RNA1509_46233, RNA815_5647}

Mlig455_066652 {REF} {Length: 3742} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=97.9]; FYVE-type zinc finger [PF02318.18, score=82.0]; Immunoglobulin domain [PF13927.8, score=61.8]; Immunoglobulin V-set domain [PF07686.19, score=19.8]; Immunoglobulin domain [PF13895.8, score=19.0]} {Human: ENSG00000115648, MLPH, melanophilin, [RH, Score=106, Expect=2e-23]; ENSG00000170011, MYRIP, myosin VIIA and Rab interacting protein, [RH, Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000026303, Mlph, melanophilin, [RH, Score=105, Expect=8e-23]; ENSMUSG00000041794, Myrip, myosin VIIA and Rab interacting protein, [RH, Score=100, Expect=5e-21]} {Dmel: FBgn0086906, sls, sallimus, [Score=80.9, Expect=6e-15]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=78.2, Expect=3e-14]} {Smed: dd_Smed_v6_7945_0_1, dd_Smed_v6_7945_0_1, [RH, Score=99.8, Expect=3e-21]} {RNA1509_3815} {RNA1310_3147.1} {RNA815_5647}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA