M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_45726

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45726 5045 105.11 Mlig455_056717, Mlig455_060302

Neo: -

Age: -

Region-enriched R4: 1.349/0.00349

 NXNL2

Mlig455_056717 {REF} {Length: 1138} {Pfam: Thioredoxin-like [PF13905.8, score=95.2]; AhpC/TSA family [PF00578.23, score=48.2]; Redoxin [PF08534.12, score=44.5]; Thioredoxin [PF00085.22, score=39.8]; Thioredoxin-like domain [PF13098.8, score=29.9]; Thioredoxin-like [PF13899.8, score=22.0]; Thioredoxin [PF14595.8, score=20.3]} {Human: ENSG00000130045, NXNL2, nucleoredoxin like 2, [RH, Score=85.9, Expect=2e-21]} {Mouse: ENSMUSG00000021396, Nxnl2, nucleoredoxin-like 2, [RH, Score=87.0, Expect=3e-22]} {Celegans: WBGene00021796, Y52E8A.3, [RH, Score=120, Expect=1e-35]} {RNA1509_4074, RNA1509_46636, RNA1509_9736} {RNA1310_41004, RNA1509_4074, RNA1509_46636, RNA1509_9736} {RNA1509_4074, RNA1509_46636, RNA1509_9736, RNA815_22016}

Mlig455_060302 {REF} {Length: 1261} {Pfam: Thioredoxin-like [PF13905.8, score=95.5]; AhpC/TSA family [PF00578.23, score=48.5]; Redoxin [PF08534.12, score=44.5]; Thioredoxin [PF00085.22, score=39.7]; Thioredoxin-like domain [PF13098.8, score=30.0]; Thioredoxin-like [PF13899.8, score=22.0]; Thioredoxin [PF14595.8, score=20.2]} {Human: ENSG00000130045, NXNL2, nucleoredoxin like 2, [RH, Score=85.9, Expect=1e-21]} {Mouse: ENSMUSG00000021396, Nxnl2, nucleoredoxin-like 2, [RH, Score=88.2, Expect=1e-22]} {Celegans: WBGene00021796, Y52E8A.3, [RH, Score=123, Expect=1e-36]} {RNA1509_21827, RNA1509_22137, RNA1509_9736} {RNA1310_41004, RNA1509_21827, RNA1509_22137} {RNA1509_21827, RNA1509_22137, RNA815_22016}

Cumulative graph for MligTC455_45726

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.811 6.795 0.17139 0.79685
RegionR2 -1.116 6.795 0.00545 0.06798
RegionR3 0.3 6.795 0.35846 0.89380
RegionR4 1.349 6.795 0.00025 0.00349
RegionR5 0.734 6.795 0.02104 0.10062
RegionR6 0.43 6.795 0.18945 0.75558
RegionR7 -0.122 6.795 0.73165 1.00000
RegionR8 -0.763 6.795 0.07821 0.53277

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.082 6.795 0.17458 0.91661
RegenerationR2 0.629 6.795 0.12071 0.54018
RegenerationR3 -0.165 6.795 0.68971 0.94428
RegenerationR4 -0.256 6.795 0.54697 0.89119
RegenerationR5 -0.127 6.795 0.75689 0.97410
RegenerationR6 -0.264 6.795 0.52690 0.82471
RegenerationBL 0.161 6.795 0.66466 0.99860
RegenerationTP 1.054 6.795 0.00770 0.14745


Genes with expression patterns similar to MligTC455_45726

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45726 5045 105.11 Mlig455_056717, Mlig455_060302

Neo: -

Age: -

Region-enriched R4: 1.349/0.00349

 NXNL2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_056717 {REF} {Length: 1138} {Pfam: Thioredoxin-like [PF13905.8, score=95.2]; AhpC/TSA family [PF00578.23, score=48.2]; Redoxin [PF08534.12, score=44.5]; Thioredoxin [PF00085.22, score=39.8]; Thioredoxin-like domain [PF13098.8, score=29.9]; Thioredoxin-like [PF13899.8, score=22.0]; Thioredoxin [PF14595.8, score=20.3]} {Human: ENSG00000130045, NXNL2, nucleoredoxin like 2, [RH, Score=85.9, Expect=2e-21]} {Mouse: ENSMUSG00000021396, Nxnl2, nucleoredoxin-like 2, [RH, Score=87.0, Expect=3e-22]} {Celegans: WBGene00021796, Y52E8A.3, [RH, Score=120, Expect=1e-35]} {RNA1509_4074, RNA1509_46636, RNA1509_9736} {RNA1310_41004, RNA1509_4074, RNA1509_46636, RNA1509_9736} {RNA1509_4074, RNA1509_46636, RNA1509_9736, RNA815_22016}

Mlig455_060302 {REF} {Length: 1261} {Pfam: Thioredoxin-like [PF13905.8, score=95.5]; AhpC/TSA family [PF00578.23, score=48.5]; Redoxin [PF08534.12, score=44.5]; Thioredoxin [PF00085.22, score=39.7]; Thioredoxin-like domain [PF13098.8, score=30.0]; Thioredoxin-like [PF13899.8, score=22.0]; Thioredoxin [PF14595.8, score=20.2]} {Human: ENSG00000130045, NXNL2, nucleoredoxin like 2, [RH, Score=85.9, Expect=1e-21]} {Mouse: ENSMUSG00000021396, Nxnl2, nucleoredoxin-like 2, [RH, Score=88.2, Expect=1e-22]} {Celegans: WBGene00021796, Y52E8A.3, [RH, Score=123, Expect=1e-36]} {RNA1509_21827, RNA1509_22137, RNA1509_9736} {RNA1310_41004, RNA1509_21827, RNA1509_22137} {RNA1509_21827, RNA1509_22137, RNA815_22016}
2. MligTC455_45227 2430 50.62 Mlig455_020292

Neo: -

Age: logFC(26M/2M)=-0.456

 1.863 - - - 0.956 0.907 - Mlig455_020292 {REF} {Length: 1982} {NoTransDecoderORF} {RNA1509_4890} {RNA1310_8597} {RNA815_3753}
3. MligTC455_25353 9033 188.19 Mlig455_007868, Mlig455_021140

Neo: -

Age: Down-Up-Up

 HIST4H4 1.859 - - - 0.956 0.903 -

Mlig455_007868 {REF} {Length: 1216} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_3012} {RNA1310_36467} {RNA815_18705}

Mlig455_021140 {REF} {Length: 3267} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_1791, RNA1509_22069, RNA1509_22555, RNA1509_3012} {RNA1310_36467, RNA1509_1791, RNA1509_22069, RNA1509_22555, RNA1509_3012} {RNA1509_1791, RNA1509_22069, RNA1509_22555, RNA1509_3012, RNA815_18705}
4. MligTC455_20628 439 9.14 Mlig455_058160, Mlig455_058225, Mlig455_058231

Neo: -

Age: -

 1.686 0.721 - - - 0.965 -

Mlig455_058160 {REF} {Length: 3431} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=4e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=201, Expect=2e-58]} {RNA1509_19499} {RNA1310_13236.1} {RNA815_4665}

Mlig455_058225 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=7e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=202, Expect=1e-58]} {RNA1509_19499} {RNA1310_13236.1, RNA1509_19499} {RNA1509_19499, RNA815_4665}

Mlig455_058231 {REF} {Length: 2506} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=7e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=202, Expect=1e-58]} {RNA1509_19499} {RNA1310_13236.2} {RNA815_4665}
5. MligTC455_18913 17071 355.64 Mlig455_037252

Neo: Int S/G2/M

Age: -

 BTF3 0.982 - - - - 0.982 - Mlig455_037252 {REF} {Length: 740} {TRANSSPLICED} {Pfam: NAC domain [PF01849.20, score=78.9]} {Human: ENSG00000145741, BTF3, basic transcription factor 3, [RH, Score=164, Expect=6e-52]; ENSG00000134717, BTF3L4, basic transcription factor 3 like 4, [RH, Score=158, Expect=2e-49]} {Mouse: ENSMUSG00000021660, Btf3, basic transcription factor 3, [RH, Score=164, Expect=4e-52]; ENSMUSG00000114133, Gm20075, predicted gene, 20075, [RH, Score=158, Expect=1e-49]; ENSMUSG00000028568, Btf3l4, basic transcription factor 3-like 4, [RH, Score=158, Expect=1e-49]} {Dmel: FBgn0031264, CG11835, [RH, Score=159, Expect=1e-45]} {Celegans: WBGene00002045, icd-1, Transcription factor BTF3 homolog, [RH, Score=174, Expect=2e-56]} {Smed: dd_Smed_v6_358_0_1, dd_Smed_v6_358_0_1, [RH, Score=181, Expect=7e-59]} {RNA1509_353} {RNA1310_48527, RNA1509_353} {RNA1509_353, RNA815_24381}
6. MligTC455_33752 75 1.57 Mlig455_009289

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_009289 {REF} {Length: 2683} {RNA1509_34999} {RNA1310_11034.2} {RNA815_18722.1}
7. MligTC455_47978 338 7.05 Mlig455_029027

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.509

 0.974 - - - - 0.974 - Mlig455_029027 {REF} {Length: 2509} {RNA1509_33577, RNA1509_55410} {RNA1310_26945, RNA1509_33577, RNA1509_55410} {RNA1509_33577, RNA1509_55410, RNA815_10135.1}
8. MligTC455_50967 999 20.82 Mlig455_054312

Neo: -

Age: logFC(26M/2M)=-0.256

Regeneration-upregulated TP: 2.048

Regeneration-enriched TP: 2.048

 MAP1A 0.969 - - - 0.969 - - Mlig455_054312 {REF} {Length: 1680} {Pfam: SH3-binding, glutamic acid-rich protein [PF04908.17, score=75.1]} {Human: ENSG00000166963, MAP1A, microtubule associated protein 1A, [Score=53.5, Expect=2e-07]; ENSG00000142669, SH3BGRL3, SH3 domain binding glutamate rich protein like 3, [Score=53.1, Expect=8e-09]} {Mouse: ENSMUSG00000028843, Sh3bgrl3, SH3 domain binding glutamic acid-rich protein-like 3, [Score=58.5, Expect=9e-11]} {Dmel: FBgn0035772, Sh3beta, [Score=55.1, Expect=9e-09]} {Celegans: WBGene00013666, Y105E8A.1, [RH, Score=65.1, Expect=2e-12]} {Smed: dd_Smed_v6_4404_0_1, dd_Smed_v6_4404_0_1, [RH, Score=98.2, Expect=7e-24]} {RNA1509_39577} {RNA1310_36951} {RNA815_11322.1}
9. MligTC455_38441 146 3.05 Mlig455_009353

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.787

 0.968 - - - - 0.968 - Mlig455_009353 {REF} {Length: 1433} {TRANSSPLICED} {Pfam: Nuclear pore component [PF10168.11, score=24.1]} {RNA1509_31196, RNA1509_52776} {RNA1310_23813.2, RNA1509_31196} {RNA1509_31196, RNA815_33121}
10. MligTC455_23734 1421 29.6 Mlig455_015558

Neo: -

Age: logFC(26M/2M)=-1.225

 YWHAG 0.966 - - - - 0.966 - Mlig455_015558 {REF} {Length: 1646} {TRANSSPLICED} {Pfam: 14-3-3 protein [PF00244.22, score=216.2]} {Human: ENSG00000170027, YWHAG, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma, [Score=197, Expect=1e-63]; ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [Score=196, Expect=4e-63]; ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [Score=196, Expect=4e-63]; ENSG00000164924, YWHAZ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta, [Score=194, Expect=1e-63]; ENSG00000128245, YWHAH, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta, [Score=192, Expect=1e-61]; ENSG00000134308, YWHAQ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [Score=192, Expect=8e-62]; ENSG00000166913, YWHAB, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta, [Score=192, Expect=1e-61]} {Mouse: ENSMUSG00000051391, Ywhag, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide, [Score=197, Expect=9e-64]; ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [Score=195, Expect=7e-63]; ENSMUSG00000018326, Ywhab, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide, [Score=194, Expect=9e-63]; ENSMUSG00000022285, Ywhaz, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, [Score=193, Expect=3e-62]; ENSMUSG00000076432, Ywhaq, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [Score=191, Expect=2e-61]; ENSMUSG00000018965, Ywhah, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide, [Score=191, Expect=2e-61]} {Dmel: FBgn0004907, 14-3-3zeta, [Score=204, Expect=1e-66]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [Score=202, Expect=8e-66]} {Smed: dd_Smed_v6_5419_0_1, dd_Smed_v6_5419_0_1, [Score=207, Expect=1e-67]} {RNA1509_8237} {RNA1310_9959} {RNA815_12064}
11. MligTC455_18773 583 12.15 Mlig455_029284

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.342

Region-enriched R7: 3.555/0.00000
Region-enriched R6: 2.984/0.00000

 SLC26A5 0.965 - - - - 0.965 - Mlig455_029284 {REF} {Length: 3598} {Pfam: Sulfate permease family [PF00916.22, score=372.4]; STAS domain [PF01740.23, score=88.1]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [RH, Score=478, Expect=2e-156]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [RH, Score=477, Expect=4e-156]} {Dmel: FBgn0036770, Prestin, [RH, Score=369, Expect=5e-115]} {Celegans: WBGene00010788, sulp-4, Anion transporter SULP-4; SULfate Permease family, [RH, Score=373, Expect=1e-116]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [RH, Score=625, Expect=0.0]} {RNA1509_11735} {RNA1310_1368.1, RNA1509_11735} {RNA1509_11735, RNA815_1869}
12. MligTC455_38088 1056 22.01 Mlig455_058088

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_058088 {REF} {Length: 288} {NoTransDecoderORF} {RNA1310_136772.2}
13. MligTC455_46133 4661 97.11 Mlig455_042441, Mlig455_042492

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.669

 HPCA 0.964 - - - - 0.964 -

Mlig455_042441 {REF} {Length: 1147} {Pfam: EF-hand domain pair [PF13499.8, score=53.4]; EF-hand domain [PF13405.8, score=50.0]; EF hand [PF00036.34, score=48.7]; EF hand [PF13202.8, score=45.5]; EF-hand domain pair [PF13833.8, score=39.2]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=29.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=21.3]} {Human: ENSG00000121905, HPCA, hippocalcin, [Score=52.4, Expect=3e-08]} {Mouse: ENSMUSG00000028785, Hpca, hippocalcin, [Score=52.4, Expect=1e-08]} {Smed: dd_Smed_v6_3283_0_1, dd_Smed_v6_3283_0_1, [Score=44.3, Expect=7e-06]} {RNA1509_17598} {RNA1310_39121.1} {RNA815_21031}

Mlig455_042492 {REF} {Length: 1147} {Pfam: EF-hand domain pair [PF13499.8, score=53.4]; EF-hand domain [PF13405.8, score=50.0]; EF hand [PF00036.34, score=48.7]; EF hand [PF13202.8, score=45.5]; EF-hand domain pair [PF13833.8, score=39.2]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=29.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=21.3]} {Human: ENSG00000121905, HPCA, hippocalcin, [Score=52.4, Expect=3e-08]} {Mouse: ENSMUSG00000028785, Hpca, hippocalcin, [Score=52.4, Expect=1e-08]} {Smed: dd_Smed_v6_3283_0_1, dd_Smed_v6_3283_0_1, [Score=44.3, Expect=7e-06]} {RNA1509_17598, RNA1509_19820, RNA1509_45317, RNA1509_47679, RNA1509_48839} {RNA1310_39121.1, RNA1509_17598, RNA1509_19820, RNA1509_45317, RNA1509_47679, RNA1509_48839} {RNA1509_17598, RNA1509_19820, RNA1509_45317, RNA1509_47679, RNA1509_48839, RNA815_21031}
14. MligTC455_30265 720 14.99 Mlig455_014549, Mlig455_036942

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.640

 0.963 - - - - 0.963 -

Mlig455_014549 {REF} {Length: 1343} {RNA1509_45000} {RNA1310_32524} {RNA815_26384}

Mlig455_036942 {REF} {Length: 1343} {RNA1509_45000} {RNA1310_32524} {RNA815_26384}
15. MligTC455_26809 151 3.15 Mlig455_002598

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_002598 {REF} {Length: 1159} {NoTransDecoderORF} {RNA1509_30416} {RNA1310_68887} {RNA815_1628}
16. MligTC455_23735 1283 26.72 Mlig455_037974

Neo: -

Age: logFC(26M/2M)=0.565

 YWHAZ 0.957 - - - - 0.957 - Mlig455_037974 {REF} {Length: 2082} {Pfam: 14-3-3 protein [PF00244.22, score=542.5]} {Human: ENSG00000164924, YWHAZ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta, [RH, Score=339, Expect=3e-116]; ENSG00000134308, YWHAQ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [RH, Score=333, Expect=5e-114]} {Mouse: ENSMUSG00000022285, Ywhaz, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, [RH, Score=338, Expect=3e-116]; ENSMUSG00000076432, Ywhaq, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [RH, Score=333, Expect=4e-114]} {Dmel: FBgn0004907, 14-3-3zeta, [Score=340, Expect=5e-117]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [RH, Score=340, Expect=6e-117]} {Smed: dd_Smed_v6_5419_0_1, dd_Smed_v6_5419_0_1, [RH, Score=348, Expect=4e-120]} {RNA1509_55614} {RNA1310_9959} {RNA815_12064}
17. MligTC455_52162 893 18.6 Mlig455_000693, Mlig455_000751

Neo: -

Age: Down-Up-Down

 FAM177A1 0.957 - - - - 0.957 -

Mlig455_000693 {REF} {Length: 1193} {TRANSSPLICED} {Pfam: FAM177 family [PF14774.8, score=96.9]} {Human: ENSG00000151327, FAM177A1, family with sequence similarity 177 member A1, [RH, Score=82.8, Expect=2e-19]} {Mouse: ENSMUSG00000094103, 1700047I17Rik2, RIKEN cDNA 1700047I17 gene 2, [RH, Score=82.8, Expect=1e-19]; ENSMUSG00000095595, Fam177a, family with sequence similarity 177, member A, [RH, Score=82.8, Expect=1e-19]} {Dmel: FBgn0029937, CG8300, [RH, Score=58.9, Expect=5e-11]} {Smed: dd_Smed_v6_3285_0_1, dd_Smed_v6_3285_0_1, [RH, Score=53.5, Expect=5e-10]} {RNA1509_25216, RNA1509_31337} {RNA1310_23587.2, RNA1509_31337} {RNA1509_31337, RNA815_25202}

Mlig455_000751 {REF} {Length: 1192} {TRANSSPLICED} {Pfam: FAM177 family [PF14774.8, score=97.6]} {Human: ENSG00000151327, FAM177A1, family with sequence similarity 177 member A1, [RH, Score=82.8, Expect=2e-19]} {Mouse: ENSMUSG00000094103, 1700047I17Rik2, RIKEN cDNA 1700047I17 gene 2, [RH, Score=82.4, Expect=1e-19]; ENSMUSG00000095595, Fam177a, family with sequence similarity 177, member A, [RH, Score=82.4, Expect=1e-19]} {Dmel: FBgn0029937, CG8300, [RH, Score=58.9, Expect=5e-11]} {Smed: dd_Smed_v6_3285_0_1, dd_Smed_v6_3285_0_1, [RH, Score=53.5, Expect=5e-10]} {RNA1509_25216, RNA1509_40945, RNA1509_41307} {RNA1310_23587.2, RNA1509_25216, RNA1509_40945, RNA1509_41307} {RNA1509_25216, RNA1509_40945, RNA1509_41307, RNA815_25202}
18. MligTC455_40990 33 0.69 Mlig455_028229

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_028229 {REF} {Length: 910} {NoTransDecoderORF} {RNA1509_31256} {RNA1310_2177} {RNA815_2763.1}
19. MligTC455_17513 513 10.68 Mlig455_044710

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.371

 0.954 - - - - 0.954 - Mlig455_044710 {REF} {Length: 1090} {RNA1509_54502} {RNA1310_19892.1} {RNA815_10608}
20. MligTC455_28112 396 8.24 Mlig455_039938, Mlig455_071121

Neo: -

Age: -

 0.954 - - - - 0.954 -

Mlig455_039938 {REF} {Length: 232} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_54448} {RNA815_38909}

Mlig455_071121 {REF} {Length: 713} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_76536} {RNA815_52485}
21. MligTC455_13686 81 1.69 Mlig455_025201

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_025201 {REF} {Length: 513} {NoTransDecoderORF} {RNA1509_57863} {RNA1310_12861} {RNA815_64064}
22. MligTC455_20340 97 2.02 Mlig455_011026, Mlig455_049209

Neo: -

Age: -

 0.95 - - - - 0.950 -

Mlig455_011026 {REF} {Length: 124} {NoTransDecoderORF} {RNA1509_50783} {RNA1310_2608}

Mlig455_049209 {REF} {Length: 7414} {RNA1509_53062} {RNA1310_2608} {RNA815_1620}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA