TomoSeq data search

Data search

Results for MligTC455_45749

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45749

15

0.30

Mlig455_008512

Neo: -

Age: -

Regeneration-downregulated R2: -5.536

Regeneration-depleted R2: -5.536

SPOP

Mlig455_008512 {REF} {Length: 2974} {Pfam: BTB/POZ domain [PF00651.33, score=83.4]; BTB And C-terminal Kelch [PF07707.17, score=22.6]} {Human: ENSG00000121067, SPOP, speckle type BTB/POZ protein, [Score=107, Expect=7e-25]} {Mouse: ENSMUSG00000057522, Spop, speckle-type POZ protein, [Score=107, Expect=5e-25]; ENSMUSG00000089696, Gm4778, predicted gene 4778, [Score=105, Expect=2e-24]; ENSMUSG00000095251, Gm10697, predicted gene 10697, [Score=103, Expect=4e-24]; ENSMUSG00000103362, Tdpoz2, TD and POZ domain containing 2, [Score=103, Expect=5e-24]; ENSMUSG00000094163, Tdpoz5, TD and POZ domain containing 5, [Score=103, Expect=4e-24]; ENSMUSG00000103350, Gm37596, predicted gene, 37596, [Score=103, Expect=4e-24]; ENSMUSG00000074424, Gm10696, predicted gene 10696, [Score=103, Expect=7e-24]; ENSMUSG00000058005, Tdpoz3, TD and POZ domain containing 3, [Score=102, Expect=2e-23]} {Dmel: FBgn0264493, rdx, roadkill, [Score=110, Expect=3e-26]} {Celegans: WBGene00011815, bath-43, BTB and MATH domain-containing protein 43, [Score=95.1, Expect=5e-21]} {Smed: dd_Smed_v6_7639_0_1, dd_Smed_v6_7639_0_1, [Score=85.5, Expect=3e-19]} {RNA1509_24346} {RNA1310_15211} {RNA815_23436}

Cumulative graph for MligTC455_45749

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.016	0.767	0.99994	1.00000
RegionR2	1.743	0.767	0.99971	1.00000
RegionR3	1.387	0.767	0.99965	1.00000
RegionR4	0.397	0.767	1.00000	1.00000
RegionR5	1.248	0.767	0.99981	1.00000
RegionR6	-2.603	0.767	0.99985	1.00000
RegionR7	1.759	0.767	0.99974	1.00000
RegionR8	-1.916	0.767	0.99988	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.077	0.767	0.99995	1.00000
RegenerationR2	-5.536	0.767	0.00002	0.00398	Specific for R2: -5.536
RegenerationR3	-1.331	0.767	0.99996	1.00000
RegenerationR4	-1.413	0.767	0.99982	1.00000
RegenerationR5	-4.083	0.767	0.99958	1.00000
RegenerationR6	-1.228	0.767	1.00000	1.00000
RegenerationBL	-3.123	0.767	0.99991	1.00000
RegenerationTP	-3.218	0.767	0.99988	1.00000

Genes with expression patterns similar to MligTC455_45749

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45749	15	0.3	Mlig455_008512	Neo: - Age: - Regeneration-downregulated R2: -5.536 Regeneration-depleted R2: -5.536	SPOP	2	-	-	1.000	-	1.000	-	Mlig455_008512 {REF} {Length: 2974} {Pfam: BTB/POZ domain [PF00651.33, score=83.4]; BTB And C-terminal Kelch [PF07707.17, score=22.6]} {Human: ENSG00000121067, SPOP, speckle type BTB/POZ protein, [Score=107, Expect=7e-25]} {Mouse: ENSMUSG00000057522, Spop, speckle-type POZ protein, [Score=107, Expect=5e-25]; ENSMUSG00000089696, Gm4778, predicted gene 4778, [Score=105, Expect=2e-24]; ENSMUSG00000095251, Gm10697, predicted gene 10697, [Score=103, Expect=4e-24]; ENSMUSG00000103362, Tdpoz2, TD and POZ domain containing 2, [Score=103, Expect=5e-24]; ENSMUSG00000094163, Tdpoz5, TD and POZ domain containing 5, [Score=103, Expect=4e-24]; ENSMUSG00000103350, Gm37596, predicted gene, 37596, [Score=103, Expect=4e-24]; ENSMUSG00000074424, Gm10696, predicted gene 10696, [Score=103, Expect=7e-24]; ENSMUSG00000058005, Tdpoz3, TD and POZ domain containing 3, [Score=102, Expect=2e-23]} {Dmel: FBgn0264493, rdx, roadkill, [Score=110, Expect=3e-26]} {Celegans: WBGene00011815, bath-43, BTB and MATH domain-containing protein 43, [Score=95.1, Expect=5e-21]} {Smed: dd_Smed_v6_7639_0_1, dd_Smed_v6_7639_0_1, [Score=85.5, Expect=3e-19]} {RNA1509_24346} {RNA1310_15211} {RNA815_23436}
2.	MligTC455_38189	14	0.29	Mlig455_029014	Neo: - Age: -	SOX2	0.992	-	-	-	-	0.992	-	Mlig455_029014 {REF} {Length: 1736} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=84.5]; HMG-box domain [PF09011.12, score=39.1]; Anti-sigma-K factor rskA [PF10099.11, score=19.1]} {Human: ENSG00000181449, SOX2, SRY-box 2, [Score=127, Expect=1e-33]; ENSG00000125285, SOX21, SRY-box 21, [Score=126, Expect=4e-34]; ENSG00000182968, SOX1, SRY-box 1, [Score=125, Expect=2e-32]; ENSG00000168875, SOX14, SRY-box 14, [Score=124, Expect=2e-33]; ENSG00000134595, SOX3, SRY-box 3, [Score=123, Expect=2e-31]; ENSG00000129194, SOX15, SRY-box 15, [Score=121, Expect=4e-33]} {Mouse: ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=127, Expect=3e-34]; ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=127, Expect=6e-34]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=125, Expect=1e-32]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=124, Expect=9e-34]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=124, Expect=7e-32]; ENSMUSG00000041287, Sox15, SRY (sex determining region Y)-box 15, [Score=122, Expect=7e-33]} {Dmel: FBgn0036411, Sox21a, [Score=127, Expect=1e-33]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [Score=129, Expect=2e-35]} {Smed: dd_Smed_v6_13215_0_1, dd_Smed_v6_13215_0_1, [Score=132, Expect=7e-35]} {RNA1310_94698}
3.	MligTC455_07250	20	0.42	Mlig455_045061	Neo: - Age: -		0.985	-	-	-	-	0.985	-	Mlig455_045061 {REF} {Length: 2075} {RNA1310_108250} {RNA815_9898}
4.	MligTC455_24518	67	1.4	Mlig455_013756	Neo: - Age: -	CASP3	0.983	-	-	0.983	-	-	-	Mlig455_013756 {REF} {Length: 7853} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=130.0]; Ankyrin repeats (many copies) [PF13637.8, score=85.9]; Ankyrin repeat [PF00023.32, score=69.1]; Ankyrin repeat [PF13606.8, score=67.4]; Caspase domain [PF00656.24, score=58.2]; Ankyrin repeats (many copies) [PF13857.8, score=49.4]; Mab-21 protein [PF03281.16, score=33.8]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=73.2, Expect=5e-13]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=75.9, Expect=4e-14]} {Dmel: FBgn0261554, CG42672, [Score=67.8, Expect=1e-10]} {Celegans: WBGene00016030, C24A1.3, [Score=73.9, Expect=9e-13]} {Smed: dd_Smed_v6_4986_0_1, dd_Smed_v6_4986_0_1, [Score=72.8, Expect=2e-13]} {RNA1509_21569} {RNA1310_2148.1, RNA1509_21569} {RNA1509_21569, RNA815_10025}
5.	MligTC455_18890	42	0.87	Mlig455_013800	Neo: - Age: Up-Down-Down		0.978	-	-	-	-	0.978	-	Mlig455_013800 {REF} {Length: 1234} {RNA1509_44733} {RNA1310_35976} {RNA815_45308}
6.	MligTC455_09476	19	0.39	Mlig455_009290	Neo: - Age: -		0.977	-	-	-	-	0.977	-	Mlig455_009290 {REF} {Length: 2926} {RNA1509_32111} {RNA1310_47329.2} {RNA815_25064}
7.	MligTC455_16790	46	0.97	Mlig455_038405	Neo: - Age: -		0.973	-	-	-	-	0.973	-	Mlig455_038405 {REF} {Length: 1884} {RNA1509_51913} {RNA1310_36218, RNA1509_51913} {RNA1509_51913, RNA815_16479.1}
8.	MligTC455_17840	437	9.11	Mlig455_035513	Neo: - Age: Up-Down-Up Region-specific R3: 6.361 Region-enriched R3: 6.781/0.00000	KREMEN1	0.973	-	-	-	-	0.973	-	Mlig455_035513 {REF} {Length: 2316} {Pfam: WSC domain [PF01822.21, score=52.7]; F5/8 type C domain [PF00754.27, score=30.6]; Family of unknown function (DUF5470) [PF17564.4, score=25.2]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=49.7, Expect=1e-05]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=50.4, Expect=5e-06]} {Smed: dd_Smed_v6_2342_0_1, dd_Smed_v6_2342_0_1, [Score=53.1, Expect=2e-07]} {RNA1509_16751} {RNA1310_13951.2} {RNA815_6113.1}
9.	MligTC455_04456	8	0.17	Mlig455_022044	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_022044 {REF} {Length: 551}
10.	MligTC455_14034	25	0.52	Mlig455_001196	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_001196 {REF} {Length: 1906} {RNA1509_36146} {RNA1310_50710} {RNA815_46064}
11.	MligTC455_17304	101	2.1	Mlig455_031437	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.250 Region-enriched R3: 3.738/0.00900		0.965	-	-	-	-	0.965	-	Mlig455_031437 {REF} {Length: 1340} {NoTransDecoderORF} {RNA1509_15660} {RNA1310_6657.1} {RNA815_2791.1}
12.	MligTC455_16481	2	0.04	Mlig455_021672	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_021672 {REF} {Length: 908} {Pfam: Major Facilitator Superfamily [PF07690.18, score=23.8]} {Mouse: ENSMUSG00000025161, Slc16a3, solute carrier family 16 (monocarboxylic acid transporters), member 3, [Score=57.8, Expect=6e-09]} {Dmel: FBgn0035173, CG13907, [Score=102, Expect=5e-24]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=112, Expect=2e-27]} {Smed: dd_Smed_v6_10683_0_1, dd_Smed_v6_10683_0_1, [Score=72.0, Expect=6e-14]} {RNA1509_42097} {RNA1310_25416} {RNA815_9650}
13.	MligTC455_25751	36	0.75	Mlig455_031594	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_031594 {REF} {Length: 581} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_5734} {RNA1310_40945.1} {RNA815_11842.1}
14.	MligTC455_12182	20	0.41	Mlig455_040697	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_040697 {REF} {Length: 543} {NoTransDecoderORF}
15.	MligTC455_29689	33	0.68	Mlig455_038052	Neo: - Age: logFC(26M/2M)=-0.671 Region-enriched R4: 4.352/0.04314	ANKRD50	0.956	-	-	0.956	-	-	-	Mlig455_038052 {REF} {Length: 4247} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=103.8]; Ankyrin repeats (many copies) [PF13637.8, score=92.6]; Ankyrin repeat [PF13606.8, score=57.9]; Ankyrin repeats (many copies) [PF13857.8, score=55.9]; Ankyrin repeat [PF00023.32, score=52.5]; Mab-21 protein [PF03281.16, score=38.6]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=102, Expect=4e-21]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=103, Expect=6e-22]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=94.4, Expect=5e-19]} {Celegans: WBGene00012124, T28D6.4, [Score=78.2, Expect=2e-14]} {Smed: dd_Smed_v6_11663_0_4, dd_Smed_v6_11663_0_4, [Score=92.0, Expect=8e-19]} {RNA1509_27730} {RNA1310_24020} {RNA815_2426.1}
16.	MligTC455_19679	66	1.38	Mlig455_028164	Neo: - Age: - Region-enriched R2: 5.194/0.00256	SLC7A11	0.954	-	-	-	-	0.954	-	Mlig455_028164 {REF} {Length: 3562} {TRANSSPLICED} {Pfam: Amino acid permease [PF13520.8, score=187.6]; Amino acid permease [PF00324.23, score=95.8]} {Human: ENSG00000151012, SLC7A11, solute carrier family 7 member 11, [RH, Score=350, Expect=1e-115]} {Mouse: ENSMUSG00000027737, Slc7a11, solute carrier family 7 (cationic amino acid transporter, y+ system), member 11, [Score=370, Expect=2e-123]} {Dmel: FBgn0002778, mnd, minidiscs, [RH, Score=379, Expect=5e-127]} {Celegans: WBGene00000004, aat-3, Amino Acid Transporter, [Score=331, Expect=2e-108]} {Smed: dd_Smed_v6_4211_0_1, dd_Smed_v6_4211_0_1, [Score=465, Expect=3e-160]} {RNA1310_31710.1} {RNA815_14153}
17.	MligTC455_30770	6	0.13	Mlig455_028957, Mlig455_068819	Neo: - Age: Up-Down-Up		0.952	-	-	-	-	0.952	-	Mlig455_028957 {REF} {Length: 921} {Pfam: SAP domain [PF02037.29, score=37.1]} {RNA1310_34705} Mlig455_068819 {REF} {Length: 3949} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=39.8]; Phage integrase family [PF00589.24, score=22.4]} {RNA1310_34705} {RNA815_30939}

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