Data search
Results for MligTC455_45787
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45787 | 956 | 19.91 | Mlig455_022003 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.079/0.00186 |
CPSF3 | Mlig455_022003 {REF} {Length: 2393} {TRANSSPLICED} {Pfam: Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term [PF11718.10, score=141.0]; Beta-Casp domain [PF10996.10, score=109.1]; Metallo-beta-lactamase superfamily domain [PF16661.7, score=74.4]; Metallo-beta-lactamase superfamily [PF00753.29, score=73.5]; Zn-dependent metallo-hydrolase RNA specificity domain [PF07521.14, score=56.9]; Beta-lactamase superfamily domain [PF12706.9, score=45.5]; Beta-lactamase superfamily domain [PF13483.8, score=29.0]} {Human: ENSG00000119203, CPSF3, cleavage and polyadenylation specific factor 3, [RH, Score=845, Expect=0.0]} {Mouse: ENSMUSG00000054309, Cpsf3, cleavage and polyadenylation specificity factor 3, [RH, Score=848, Expect=0.0]} {Dmel: FBgn0261065, Cpsf73, Cleavage and polyadenylation specificity factor 73, [RH, Score=838, Expect=0.0]} {Celegans: WBGene00013460, cpsf-3, Cleavage and Polyadenylation Specificity Factor, [RH, Score=713, Expect=0.0]} {Smed: dd_Smed_v6_2005_0_1, dd_Smed_v6_2005_0_1, [RH, Score=951, Expect=0.0]} {RNA1509_5278} {RNA1310_8263, RNA1509_5278} {RNA1509_5278, RNA815_3205} |
Cumulative graph for MligTC455_45787
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.096 | 4.57 | 0.28945 | 0.94131 | |
| RegionR2 | 0.443 | 4.57 | 0.28887 | 0.67718 | |
| RegionR3 | 0.203 | 4.57 | 0.55255 | 1.00000 | |
| RegionR4 | -0.026 | 4.57 | 0.94663 | 1.00000 | |
| RegionR5 | 1.079 | 4.57 | 0.00012 | 0.00186 | |
| RegionR6 | -0.209 | 4.57 | 0.57085 | 1.00000 | |
| RegionR7 | -0.957 | 4.57 | 0.08914 | 0.57199 | |
| RegionR8 | 0.564 | 4.57 | 0.32178 | 0.95564 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.335 | 4.57 | 0.28923 | 0.98735 | |
| RegenerationR2 | -0.471 | 4.57 | 0.16157 | 0.59904 | |
| RegenerationR3 | -0.047 | 4.57 | 0.89828 | 1.00000 | |
| RegenerationR4 | 0.461 | 4.57 | 0.18912 | 0.63297 | |
| RegenerationR5 | 0.079 | 4.57 | 0.79418 | 0.98722 | |
| RegenerationR6 | 1.392 | 4.57 | 0.00013 | 0.01063 | |
| RegenerationBL | 0.671 | 4.57 | 0.13725 | 0.44163 | |
| RegenerationTP | 0.233 | 4.57 | 0.65987 | 0.99357 |
Genes with expression patterns similar to MligTC455_45787
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45787 | 956 | 19.91 | Mlig455_022003 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.079/0.00186 |
CPSF3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_022003 {REF} {Length: 2393} {TRANSSPLICED} {Pfam: Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term [PF11718.10, score=141.0]; Beta-Casp domain [PF10996.10, score=109.1]; Metallo-beta-lactamase superfamily domain [PF16661.7, score=74.4]; Metallo-beta-lactamase superfamily [PF00753.29, score=73.5]; Zn-dependent metallo-hydrolase RNA specificity domain [PF07521.14, score=56.9]; Beta-lactamase superfamily domain [PF12706.9, score=45.5]; Beta-lactamase superfamily domain [PF13483.8, score=29.0]} {Human: ENSG00000119203, CPSF3, cleavage and polyadenylation specific factor 3, [RH, Score=845, Expect=0.0]} {Mouse: ENSMUSG00000054309, Cpsf3, cleavage and polyadenylation specificity factor 3, [RH, Score=848, Expect=0.0]} {Dmel: FBgn0261065, Cpsf73, Cleavage and polyadenylation specificity factor 73, [RH, Score=838, Expect=0.0]} {Celegans: WBGene00013460, cpsf-3, Cleavage and Polyadenylation Specificity Factor, [RH, Score=713, Expect=0.0]} {Smed: dd_Smed_v6_2005_0_1, dd_Smed_v6_2005_0_1, [RH, Score=951, Expect=0.0]} {RNA1509_5278} {RNA1310_8263, RNA1509_5278} {RNA1509_5278, RNA815_3205} |
| 2. | MligTC455_45788 | 733 | 15.27 | Mlig455_022011 | Neo: Int S/G2/M Age: Down-Down-Up Regeneration-upregulated R6: 1.534 Regeneration-enriched R6: 1.534 |
2.566 | - | - | 0.853 | 0.950 | - | 0.763 | Mlig455_022011 {REF} {Length: 683} {Pfam: Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term [PF11718.10, score=35.9]} {Dmel: FBgn0261065, Cpsf73, Cleavage and polyadenylation specificity factor 73, [Score=58.5, Expect=8e-11]} {Smed: dd_Smed_v6_2005_0_1, dd_Smed_v6_2005_0_1, [Score=73.9, Expect=2e-16]} {RNA1509_5278} {RNA1310_8263} {RNA815_3205} | |
| 3. | MligTC455_23854 | 1346 | 28.04 | Mlig455_047009, Mlig455_047049 | Neo: Neoblast, stringent Age: - Regeneration-upregulated BL: 2.711 Regeneration-enriched BL: 2.711 |
SMARCA1, SMARCA5 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_047009 {REF} {Length: 4747} {Pfam: SNF2-related domain [PF00176.25, score=175.5]; SLIDE [PF09111.12, score=142.3]; HAND [PF09110.13, score=92.2]; Helicase conserved C-terminal domain [PF00271.33, score=78.5]; Myb-like DNA-binding domain [PF00249.33, score=32.0]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.7]} {Human: ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1078, Expect=0.0]; ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1074, Expect=0.0]} {Mouse: ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1088, Expect=0.0]; ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1078, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [Score=1056, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [Score=985, Expect=0.0]} {Smed: dd_Smed_v6_3473_0_1, dd_Smed_v6_3473_0_1, [Score=1015, Expect=0.0]} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1310_4518.1, RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597, RNA815_683.1} Mlig455_047049 {REF} {Length: 3986} {Pfam: SNF2-related domain [PF00176.25, score=279.7]; SLIDE [PF09111.12, score=124.2]; HAND [PF09110.13, score=91.8]; Helicase conserved C-terminal domain [PF00271.33, score=77.7]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; DEAD/DEAH box helicase [PF00270.31, score=28.9]; Myb-like DNA-binding domain [PF00249.33, score=24.3]; DNA-binding domain [PF13892.8, score=22.1]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.1]} {Human: ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1291, Expect=0.0]; ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1268, Expect=0.0]} {Mouse: ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1292, Expect=0.0]; ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1274, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [RH, Score=1256, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [RH, Score=1149, Expect=0.0]} {Smed: dd_Smed_v6_3355_0_1, dd_Smed_v6_3355_0_1, [RH, Score=1175, Expect=0.0]} {RNA1509_2044} {RNA1310_4518.1} {RNA815_683.1} |
| 4. | MligTC455_30991 | 997 | 20.78 | Mlig455_018127 | Neo: Germline Age: Up-Down-Down Region-specific R4: 4.938 Region-enriched R4: 3.387/0.00094 |
KLHL5 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_018127 {REF} {Length: 8448} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=113.8]; Kelch motif [PF13964.8, score=87.8]; Kelch motif [PF07646.17, score=71.4]; BTB And C-terminal Kelch [PF07707.17, score=60.0]; Galactose oxidase, central domain [PF13418.8, score=44.3]; Kelch motif [PF13854.8, score=42.8]; Galactose oxidase, central domain [PF13415.8, score=36.2]; BTB/POZ domain [PF00651.33, score=30.2]} {Human: ENSG00000109790, KLHL5, kelch like family member 5, [Score=120, Expect=3e-28]} {Mouse: ENSMUSG00000054920, Klhl5, kelch-like 5, [Score=120, Expect=4e-28]} {Dmel: FBgn0037978, KLHL18, Kelch like family member 18, [Score=129, Expect=1e-31]} {Celegans: WBGene00020952, kel-8, Kelch-like protein 8, [Score=62.4, Expect=5e-10]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=97.1, Expect=5e-21]} {RNA1509_9219} {RNA1310_468, RNA1509_9219} {RNA1509_9219, RNA815_355.1} |
| 5. | MligTC455_44885 | 1182 | 24.62 | Mlig455_046236 | Neo: - Age: logFC(26M/2M)=-0.476 Region-enriched R5: 1.329/0.00479 |
CBS | 0.96 | - | - | - | - | 0.960 | - | Mlig455_046236 {REF} {Length: 2494} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=230.9]} {Human: ENSG00000160200, CBS, cystathionine-beta-synthase, [Score=223, Expect=2e-67]; ENSG00000274276, CBSL, cystathionine-beta-synthase like, [Score=223, Expect=2e-67]} {Mouse: ENSMUSG00000024039, Cbs, cystathionine beta-synthase, [Score=224, Expect=2e-68]} {Dmel: FBgn0031148, Cbs, centrosomin's beautiful sister, [Score=191, Expect=3e-56]} {Celegans: WBGene00010759, cysl-2, Bifunctional L-3-cyanoalanine synthase/cysteine synthase, [RH, Score=197, Expect=2e-60]} {Smed: dd_Smed_v6_1585_0_1, dd_Smed_v6_1585_0_1, [Score=203, Expect=8e-61]} {RNA1509_20532, RNA1509_33466, RNA1509_42465, RNA1509_48501, RNA1509_60061} {RNA1310_31449, RNA1509_20532, RNA1509_42465, RNA1509_48501, RNA1509_60061} {RNA1509_20532, RNA1509_42465, RNA1509_48501, RNA1509_60061, RNA815_11546.1} |
| 6. | MligTC455_39236 | 361 | 7.52 | Mlig455_037466 | Neo: Irradiation Age: Up-Down-Up |
MAFB | 0.957 | - | - | - | - | 0.957 | - | Mlig455_037466 {REF} {Length: 1412} {Pfam: bZIP Maf transcription factor [PF03131.19, score=71.7]; bZIP transcription factor [PF00170.23, score=28.2]} {Human: ENSG00000204103, MAFB, MAF bZIP transcription factor B, [Score=86.3, Expect=2e-19]; ENSG00000178573, MAF, MAF bZIP transcription factor, [Score=85.9, Expect=5e-19]; ENSG00000285493, NRL, neural retina leucine zipper, [Score=82.0, Expect=3e-18]; ENSG00000129535, NRL, neural retina leucine zipper, [Score=82.0, Expect=3e-18]} {Mouse: ENSMUSG00000055435, Maf, avian musculoaponeurotic fibrosarcoma oncogene homolog, [Score=86.7, Expect=2e-19]; ENSMUSG00000074622, Mafb, v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian), [Score=86.7, Expect=1e-19]} {Dmel: FBgn0034534, maf-S, [Score=67.8, Expect=3e-14]} {Celegans: WBGene00077521, maf-1, MAF (MusculoAponeurotic Fibrosarcoma) transcription factor homolog, [Score=59.3, Expect=7e-11]} {RNA1509_11300} {RNA1310_29777.1} {RNA815_27425} |
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