TomoSeq data search

Data search

Results for MligTC455_45810

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45810	64	1.34	Mlig455_067484	Neo: - Age: Down-Up-Down	GNB2	Mlig455_067484 {REF} {Length: 2984} {Pfam: WD domain, G-beta repeat [PF00400.34, score=114.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=23.7]} {Human: ENSG00000172354, GNB2, G protein subunit beta 2, [Score=338, Expect=3e-115]; ENSG00000114450, GNB4, G protein subunit beta 4, [Score=338, Expect=6e-115]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=338, Expect=3e-115]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=327, Expect=2e-110]} {Mouse: ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=338, Expect=2e-115]; ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=338, Expect=2e-115]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=328, Expect=3e-111]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=325, Expect=4e-110]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=349, Expect=7e-120]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=345, Expect=4e-118]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=377, Expect=2e-130]} {RNA1509_26331, RNA1509_41740, RNA1509_4807} {RNA1310_7323, RNA1509_26331, RNA1509_41740, RNA1509_4807} {RNA1509_26331, RNA1509_41740, RNA1509_4807, RNA815_2947}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45810

1.34

Mlig455_067484

Neo: -

Age: Down-Up-Down

GNB2

Mlig455_067484 {REF} {Length: 2984} {Pfam: WD domain, G-beta repeat [PF00400.34, score=114.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=23.7]} {Human: ENSG00000172354, GNB2, G protein subunit beta 2, [Score=338, Expect=3e-115]; ENSG00000114450, GNB4, G protein subunit beta 4, [Score=338, Expect=6e-115]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=338, Expect=3e-115]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=327, Expect=2e-110]} {Mouse: ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=338, Expect=2e-115]; ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=338, Expect=2e-115]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=328, Expect=3e-111]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=325, Expect=4e-110]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=349, Expect=7e-120]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=345, Expect=4e-118]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=377, Expect=2e-130]} {RNA1509_26331, RNA1509_41740, RNA1509_4807} {RNA1310_7323, RNA1509_26331, RNA1509_41740, RNA1509_4807} {RNA1509_26331, RNA1509_41740, RNA1509_4807, RNA815_2947}

Cumulative graph for MligTC455_45810

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.815	1.583	0.33509	0.98168
RegionR2	0.61	1.583	0.51892	0.89385
RegionR3	0.548	1.583	0.49090	0.98981
RegionR4	2.309	1.583	0.06929	0.24046
RegionR5	0.48	1.583	0.49920	0.86218
RegionR6	1.487	1.583	0.15141	0.69369
RegionR7	-4.17	1.583	0.99984	1.00000
RegionR8	-4.08	1.583	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.379	1.583	0.39577	1.00000
RegenerationR2	-1.17	1.583	0.13840	0.56702
RegenerationR3	-0.363	1.583	0.66626	0.93572
RegenerationR4	-2.056	1.583	0.04232	0.33080
RegenerationR5	0.327	1.583	0.71249	0.95668
RegenerationR6	-0.444	1.583	0.58250	0.85906
RegenerationBL	2.823	1.583	0.13687	0.44076
RegenerationTP	2.544	1.583	0.34996	0.79169

Genes with expression patterns similar to MligTC455_45810

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45810	64	1.34	Mlig455_067484	Neo: - Age: Down-Up-Down	GNB2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_067484 {REF} {Length: 2984} {Pfam: WD domain, G-beta repeat [PF00400.34, score=114.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=23.7]} {Human: ENSG00000172354, GNB2, G protein subunit beta 2, [Score=338, Expect=3e-115]; ENSG00000114450, GNB4, G protein subunit beta 4, [Score=338, Expect=6e-115]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=338, Expect=3e-115]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=327, Expect=2e-110]} {Mouse: ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=338, Expect=2e-115]; ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=338, Expect=2e-115]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=328, Expect=3e-111]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=325, Expect=4e-110]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=349, Expect=7e-120]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=345, Expect=4e-118]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=377, Expect=2e-130]} {RNA1509_26331, RNA1509_41740, RNA1509_4807} {RNA1310_7323, RNA1509_26331, RNA1509_41740, RNA1509_4807} {RNA1509_26331, RNA1509_41740, RNA1509_4807, RNA815_2947}
2.	MligTC455_04275	22	0.45	Mlig455_016313, Mlig455_042891	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_016313 {REF} {Length: 554} {TRANSSPLICED} {RNA1509_33750} {RNA1310_18634} {RNA815_20382} Mlig455_042891 {REF} {Length: 554} {TRANSSPLICED} {RNA1509_33750} {RNA1310_18634} {RNA815_20382}
3.	MligTC455_31513	254	5.29	Mlig455_036847, Mlig455_052983	Neo: - Age: -	CAPN5	0.968	-	-	0.968	-	-	-	Mlig455_036847 {REF} {Length: 4572} {TRANSSPLICED} {Pfam: Calpain family cysteine protease [PF00648.23, score=189.2]; Calpain large subunit, domain III [PF01067.24, score=50.9]; C2 domain [PF00168.32, score=34.3]} {Human: ENSG00000149260, CAPN5, calpain 5, [Score=298, Expect=2e-91]} {Mouse: ENSMUSG00000035547, Capn5, calpain 5, [Score=297, Expect=6e-91]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=184, Expect=3e-50]} {Celegans: WBGene00006606, tra-3, Calpain-5, [Score=198, Expect=8e-55]} {Smed: dd_Smed_v6_3864_0_1, dd_Smed_v6_3864_0_1, [RH, Score=201, Expect=5e-56]} {RNA1509_18066} {RNA1310_11620, RNA1509_18066} {RNA1509_18066, RNA815_3340} Mlig455_052983 {REF} {Length: 4195} {Pfam: Calpain family cysteine protease [PF00648.23, score=62.2]; Calpain large subunit, domain III [PF01067.24, score=51.2]; C2 domain [PF00168.32, score=34.7]} {Human: ENSG00000149260, CAPN5, calpain 5, [Score=185, Expect=1e-50]} {Mouse: ENSMUSG00000035547, Capn5, calpain 5, [Score=187, Expect=1e-51]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=91.7, Expect=3e-19]} {Celegans: WBGene00006606, tra-3, Calpain-5, [Score=114, Expect=1e-26]} {Smed: dd_Smed_v6_8673_0_1, dd_Smed_v6_8673_0_1, [Score=110, Expect=4e-25]} {RNA1509_18066} {RNA1310_11620} {RNA815_3340}
4.	MligTC455_16748	272	5.66	Mlig455_044133	Neo: Irradiation Age: Down-Up-Down	PPP1R8	0.963	-	-	-	-	0.963	-	Mlig455_044133 {REF} {Length: 2654} {Pfam: FHA domain [PF00498.28, score=54.4]} {Human: ENSG00000117751, PPP1R8, protein phosphatase 1 regulatory subunit 8, [RH, Score=280, Expect=3e-91]} {Mouse: ENSMUSG00000028882, Ppp1r8, protein phosphatase 1, regulatory subunit 8, [RH, Score=278, Expect=2e-90]} {Dmel: FBgn0026402, NiPp1, Nuclear inhibitor of Protein phosphatase 1, [Score=269, Expect=2e-86]} {Celegans: WBGene00015233, B0511.7, [Score=160, Expect=9e-46]} {Smed: dd_Smed_v6_6770_0_1, dd_Smed_v6_6770_0_1, [Score=296, Expect=1e-97]} {RNA1509_31655} {RNA1310_7769.2} {RNA815_6925.1}