TomoSeq data search

Data search

Results for MligTC455_45821

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45821

5961

124.19

Mlig455_029425

Neo: -

Age: Down-Up-Up

TYW5

Mlig455_029425 {REF} {Length: 1938} {Pfam: Cupin-like domain [PF13621.8, score=119.6]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000162971, TYW5, tRNA-yW synthesizing protein 5, [Score=64.3, Expect=1e-10]} {Mouse: ENSMUSG00000030752, Kdm8, lysine (K)-specific demethylase 8, [Score=70.9, Expect=8e-13]} {Dmel: FBgn0035166, CG13902, [Score=63.9, Expect=9e-11]} {Celegans: WBGene00007387, jmjd-5, JuMonJi (Transcription factor) Domain protein, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_11273_0_1, dd_Smed_v6_11273_0_1, [Score=224, Expect=1e-68]} {RNA1509_14451, RNA1509_1841} {RNA1310_16511, RNA1509_14451, RNA1509_1841} {RNA1509_14451, RNA1509_1841, RNA815_6144}

Cumulative graph for MligTC455_45821

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.748	6.983	0.12441	0.71909
RegionR2	-0.26	6.983	0.30733	0.69809
RegionR3	-0.011	6.983	0.95911	1.00000
RegionR4	0.904	6.983	0.00049	0.00589
RegionR5	-0.252	6.983	0.25173	0.56857
RegionR6	-0.21	6.983	0.35221	0.93715
RegionR7	-0.252	6.983	0.33658	0.97195
RegionR8	0.829	6.983	0.00203	0.07577

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.012	6.983	0.98672	1.00000
RegenerationR2	0.154	6.983	0.55273	0.89478
RegenerationR3	0.086	6.983	0.75130	0.96501
RegenerationR4	-0.246	6.983	0.36910	0.79334
RegenerationR5	0.123	6.983	0.64241	0.92834
RegenerationR6	0.311	6.983	0.25530	0.60550
RegenerationBL	0.757	6.983	0.00165	0.03190
RegenerationTP	-0.508	6.983	0.07269	0.43187

Genes with expression patterns similar to MligTC455_45821

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45821	5961	124.19	Mlig455_029425	Neo: - Age: Down-Up-Up	TYW5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_029425 {REF} {Length: 1938} {Pfam: Cupin-like domain [PF13621.8, score=119.6]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000162971, TYW5, tRNA-yW synthesizing protein 5, [Score=64.3, Expect=1e-10]} {Mouse: ENSMUSG00000030752, Kdm8, lysine (K)-specific demethylase 8, [Score=70.9, Expect=8e-13]} {Dmel: FBgn0035166, CG13902, [Score=63.9, Expect=9e-11]} {Celegans: WBGene00007387, jmjd-5, JuMonJi (Transcription factor) Domain protein, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_11273_0_1, dd_Smed_v6_11273_0_1, [Score=224, Expect=1e-68]} {RNA1509_14451, RNA1509_1841} {RNA1310_16511, RNA1509_14451, RNA1509_1841} {RNA1509_14451, RNA1509_1841, RNA815_6144}
2.	MligTC455_42171	910	18.96	Mlig455_050223	Neo: - Age: - Region-enriched R2: 1.714/0.04973		2.372	0.958	0.702	-	0.712	-	-	Mlig455_050223 {REF} {Length: 2134} {Pfam: Innexin [PF00876.20, score=296.2]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=95.5, Expect=5e-21]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=208, Expect=6e-62]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=276, Expect=2e-87]} {RNA1509_10527} {RNA1310_14408} {RNA815_844.2}
3.	MligTC455_42634	4044	84.26	Mlig455_070344	Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 1.425 Regeneration-enriched BL: 1.425	ATP1A2	1.713	0.963	-	-	-	0.750	-	Mlig455_070344 {REF} {Length: 3621} {Pfam: E1-E2 ATPase [PF00122.22, score=151.4]; Cation transporting ATPase, C-terminus [PF00689.23, score=144.1]; Cation transport ATPase (P-type) [PF13246.8, score=78.1]; haloacid dehalogenase-like hydrolase [PF00702.28, score=72.7]; Cation transporter/ATPase, N-terminus [PF00690.28, score=59.0]; haloacid dehalogenase-like hydrolase [PF08282.14, score=25.8]} {Human: ENSG00000018625, ATP1A2, ATPase Na+/K+ transporting subunit alpha 2, [RH, Score=1508, Expect=0.0]; ENSG00000163399, ATP1A1, ATPase Na+/K+ transporting subunit alpha 1, [RH, Score=1505, Expect=0.0]; ENSG00000105409, ATP1A3, ATPase Na+/K+ transporting subunit alpha 3, [RH, Score=1497, Expect=0.0]; ENSG00000285505, AC010616.2, novel protein, ATP1A3-RABAC1 readthrough, [RH, Score=1483, Expect=0.0]} {Mouse: ENSMUSG00000007097, Atp1a2, ATPase, Na+/K+ transporting, alpha 2 polypeptide, [RH, Score=1502, Expect=0.0]; ENSMUSG00000040907, Atp1a3, ATPase, Na+/K+ transporting, alpha 3 polypeptide, [RH, Score=1495, Expect=0.0]; ENSMUSG00000033161, Atp1a1, ATPase, Na+/K+ transporting, alpha 1 polypeptide, [RH, Score=1491, Expect=0.0]} {Dmel: FBgn0002921, Atpalpha, Na pump alpha subunit, [RH, Score=1560, Expect=0.0]} {Celegans: WBGene00001137, eat-6, Sodium/potassium-transporting ATPase subunit alpha, [RH, Score=1483, Expect=0.0]} {Smed: dd_Smed_v6_1179_0_1, dd_Smed_v6_1179_0_1, [RH, Score=1654, Expect=0.0]} {RNA1509_990} {RNA1310_3228.1} {RNA815_592.2}
4.	MligTC455_38836	7201	150.01	Mlig455_032529, Mlig455_032537	Neo: - Age: -	ADGB	1.674	-	0.718	-	-	0.956	-	Mlig455_032529 {REF} {Length: 7366} {Pfam: Calpain family cysteine protease [PF00648.23, score=42.5]} {Human: ENSG00000118492, ADGB, androglobin, [Score=653, Expect=0.0]} {Mouse: ENSMUSG00000050994, Adgb, androglobin, [Score=433, Expect=8e-125]} {Celegans: WBGene00000543, clp-2, CaLPain family, [Score=73.9, Expect=9e-13]} {Smed: dd_Smed_v6_10677_0_1, dd_Smed_v6_10677_0_1, [RH, Score=365, Expect=2e-103]} {RNA1509_33121, RNA1509_41890, RNA1509_754} {RNA1310_1763.1, RNA1509_33121, RNA1509_41890} {RNA1509_33121, RNA1509_41890, RNA815_348} Mlig455_032537 {REF} {Length: 7436} {Pfam: Calpain family cysteine protease [PF00648.23, score=42.5]} {Human: ENSG00000118492, ADGB, androglobin, [Score=388, Expect=9e-110]} {Mouse: ENSMUSG00000050994, Adgb, androglobin, [RH, Score=393, Expect=1e-111]} {Celegans: WBGene00000543, clp-2, CaLPain family, [Score=73.9, Expect=8e-13]} {Smed: dd_Smed_v6_10677_0_1, dd_Smed_v6_10677_0_1, [RH, Score=366, Expect=1e-103]} {RNA1509_754} {RNA1310_333.1} {RNA815_348}
5.	MligTC455_43158	3969	82.69	Mlig455_013641	Neo: - Age: Down-Up-Up		0.953	-	-	-	0.953	-	-	Mlig455_013641 {REF} {Length: 2238} {Pfam: Cupin-like domain [PF13621.8, score=36.5]} {Dmel: FBgn0038510, CG14331, [RH, Score=217, Expect=3e-68]} {Smed: dd_Smed_v6_8235_0_1, dd_Smed_v6_8235_0_1, [Score=185, Expect=2e-55]} {RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888} {RNA1310_15437, RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888} {RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888, RNA815_7588}
6.	MligTC455_32812	8834	184.04	Mlig455_022000	Neo: - Age: logFC(26M/2M)=-0.182	GOT2	0.952	-	-	-	-	0.952	-	Mlig455_022000 {REF} {Length: 2538} {Pfam: Aminotransferase class I and II [PF00155.23, score=307.5]} {Human: ENSG00000125166, GOT2, glutamic-oxaloacetic transaminase 2, [RH, Score=608, Expect=0.0]} {Mouse: ENSMUSG00000031672, Got2, glutamatic-oxaloacetic transaminase 2, mitochondrial, [RH, Score=610, Expect=0.0]} {Dmel: FBgn0001125, Got2, Glutamate oxaloacetate transaminase 2, [RH, Score=547, Expect=0.0]} {Celegans: WBGene00015778, got-2.2, Aspartate aminotransferase, [RH, Score=594, Expect=0.0]} {Smed: dd_Smed_v6_3531_0_1, dd_Smed_v6_3531_0_1, [RH, Score=568, Expect=0.0]} {RNA1509_13280} {RNA1310_13091.1, RNA1509_13280} {RNA1509_13280, RNA815_4726}
7.	MligTC455_37110	442	9.2	Mlig455_062599	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_062599 {REF} {Length: 2968} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=26.8]} {Celegans: WBGene00003675, nhr-85, Nuclear hormone receptor family member nhr-85, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_1694_0_1, dd_Smed_v6_1694_0_1, [Score=49.3, Expect=6e-06]} {RNA1509_18710, RNA1509_50614, RNA1509_6709} {RNA1310_5067, RNA1509_18710, RNA1509_50614, RNA1509_6709} {RNA1509_18710, RNA1509_50614, RNA1509_6709, RNA815_1491}

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