Data search
Results for MligTC455_43158
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43158 | 3969 | 82.69 | Mlig455_013641 | Neo: - Age: Down-Up-Up |
Mlig455_013641 {REF} {Length: 2238} {Pfam: Cupin-like domain [PF13621.8, score=36.5]} {Dmel: FBgn0038510, CG14331, [RH, Score=217, Expect=3e-68]} {Smed: dd_Smed_v6_8235_0_1, dd_Smed_v6_8235_0_1, [Score=185, Expect=2e-55]} {RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888} {RNA1310_15437, RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888} {RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888, RNA815_7588} |
Cumulative graph for MligTC455_43158
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.917 | 6.432 | 0.00099 | 0.10315 | |
| RegionR2 | 0.37 | 6.432 | 0.31283 | 0.70396 | |
| RegionR3 | -0.059 | 6.432 | 0.86198 | 1.00000 | |
| RegionR4 | 0.781 | 6.432 | 0.04862 | 0.18919 | |
| RegionR5 | -0.29 | 6.432 | 0.39649 | 0.75300 | |
| RegionR6 | 0.402 | 6.432 | 0.22347 | 0.80431 | |
| RegionR7 | 0.88 | 6.432 | 0.01271 | 0.19910 | |
| RegionR8 | 0.833 | 6.432 | 0.04701 | 0.42560 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.971 | 6.432 | 0.07446 | 0.76170 | |
| RegenerationR2 | 0.238 | 6.432 | 0.49777 | 0.87056 | |
| RegenerationR3 | 0.542 | 6.432 | 0.14791 | 0.57568 | |
| RegenerationR4 | 0.449 | 6.432 | 0.23945 | 0.68838 | |
| RegenerationR5 | 0.916 | 6.432 | 0.01249 | 0.19734 | |
| RegenerationR6 | 0.659 | 6.432 | 0.08201 | 0.35771 | |
| RegenerationBL | 1.008 | 6.432 | 0.00184 | 0.03413 | |
| RegenerationTP | -0.02 | 6.432 | 0.95520 | 1.00000 |
Genes with expression patterns similar to MligTC455_43158
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43158 | 3969 | 82.69 | Mlig455_013641 | Neo: - Age: Down-Up-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013641 {REF} {Length: 2238} {Pfam: Cupin-like domain [PF13621.8, score=36.5]} {Dmel: FBgn0038510, CG14331, [RH, Score=217, Expect=3e-68]} {Smed: dd_Smed_v6_8235_0_1, dd_Smed_v6_8235_0_1, [Score=185, Expect=2e-55]} {RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888} {RNA1310_15437, RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888} {RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888, RNA815_7588} | |
| 2. | MligTC455_39206 | 199 | 4.15 | Mlig455_043443 | Neo: - Age: - Region-enriched R8: 3.157/0.04842 |
DCHS1 | 3.501 | - | - | 0.783 | 0.814 | 0.979 | 0.925 | Mlig455_043443 {REF} {Length: 8571} {Pfam: Cadherin domain [PF00028.19, score=631.2]; Cadherin-like [PF08266.14, score=47.3]; Cadherin-like [PF16184.7, score=29.1]} {Human: ENSG00000166341, DCHS1, dachsous cadherin-related 1, [Score=587, Expect=5e-169]} {Mouse: ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=580, Expect=4e-167]} {Dmel: FBgn0284247, ds, dachsous, [Score=515, Expect=9e-147]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=289, Expect=6e-78]} {Smed: dd_Smed_v6_11744_0_1, dd_Smed_v6_11744_0_1, [Score=226, Expect=7e-59]} {RNA1509_5448} {RNA1310_281} {RNA815_1002} |
| 3. | MligTC455_30265 | 720 | 14.99 | Mlig455_014549, Mlig455_036942 | Neo: - |
1.842 | - | - | - | 0.953 | - | 0.889 | Mlig455_014549 {REF} {Length: 1343} {RNA1509_45000} {RNA1310_32524} {RNA815_26384} Mlig455_036942 {REF} {Length: 1343} {RNA1509_45000} {RNA1310_32524} {RNA815_26384} |
|
| 4. | MligTC455_53909 | 765 | 15.95 | Mlig455_034369 | Neo: - Age: - Regeneration-upregulated BL: 3.468 Regeneration-enriched BL: 3.468 |
SBSN | 1.797 | - | - | - | 0.969 | 0.828 | - | Mlig455_034369 {REF} {Length: 2517} {Pfam: Apolipoprotein A1/A4/E domain [PF01442.20, score=20.1]} {Human: ENSG00000189001, SBSN, suprabasin, [Score=81.6, Expect=1e-15]} {Mouse: ENSMUSG00000040838, Gm11639, predicted gene 11639, [Score=71.2, Expect=2e-12]} {Celegans: WBGene00001113, dur-1, Dauer Up-Regulated, [Score=120, Expect=3e-28]} {RNA1509_53891} {RNA1310_42336} {RNA815_24531} |
| 5. | MligTC455_19846 | 421 | 8.77 | Mlig455_008356 | Neo: - Age: Down-Up-Up Region-enriched R2: 2.552/0.00697 |
1.722 | - | - | - | - | 0.974 | 0.748 | Mlig455_008356 {REF} {Length: 1722} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=29.7]; Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=25.1]} {Dmel: FBgn0035431, CG14968, [RH, Score=80.5, Expect=1e-17]} {Smed: dd_Smed_v6_16269_0_1, dd_Smed_v6_16269_0_1, [RH, Score=52.0, Expect=1e-07]} {RNA1509_28129} {RNA1310_26006, RNA1509_28129} {RNA1509_28129, RNA815_14793} | |
| 6. | MligTC455_46486 | 551 | 11.48 | Mlig455_066638 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_066638 {REF} {Length: 435} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=21.5]} {Dmel: FBgn0259718, CG42372, [RH, Score=43.9, Expect=1e-07]} {RNA1509_6986} {RNA1310_67400} {RNA815_43142} | |
| 7. | MligTC455_45821 | 5961 | 124.19 | Mlig455_029425 | Neo: - Age: Down-Up-Up |
TYW5 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_029425 {REF} {Length: 1938} {Pfam: Cupin-like domain [PF13621.8, score=119.6]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000162971, TYW5, tRNA-yW synthesizing protein 5, [Score=64.3, Expect=1e-10]} {Mouse: ENSMUSG00000030752, Kdm8, lysine (K)-specific demethylase 8, [Score=70.9, Expect=8e-13]} {Dmel: FBgn0035166, CG13902, [Score=63.9, Expect=9e-11]} {Celegans: WBGene00007387, jmjd-5, JuMonJi (Transcription factor) Domain protein, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_11273_0_1, dd_Smed_v6_11273_0_1, [Score=224, Expect=1e-68]} {RNA1509_14451, RNA1509_1841} {RNA1310_16511, RNA1509_14451, RNA1509_1841} {RNA1509_14451, RNA1509_1841, RNA815_6144} |
| 8. | MligTC455_37251 | 516 | 10.74 | Mlig455_059623 | Neo: - Age: - |
ELK1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_059623 {REF} {Length: 3829} {Pfam: Ets-domain [PF00178.24, score=110.4]; Cysteine-rich secretory protein family [PF00188.28, score=75.1]} {Human: ENSG00000126767, ELK1, ELK1, ETS transcription factor, [RH, Score=138, Expect=2e-34]} {Mouse: ENSMUSG00000009406, Elk1, ELK1, member of ETS oncogene family, [RH, Score=139, Expect=1e-34]} {Dmel: FBgn0005658, Ets65A, Ets at 65A, [Score=103, Expect=4e-24]} {Celegans: WBGene00002990, lin-1, LIN-1, [RH, Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_8018_0_1, dd_Smed_v6_8018_0_1, [RH, Score=156, Expect=4e-40]} {RNA1509_35449} {RNA1310_26919} {RNA815_9547.1} |
| 9. | MligTC455_47051 | 3486 | 72.62 | Mlig455_009503 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.389 Regeneration-upregulated BL: 1.613 Regeneration-enriched BL: 1.613 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_009503 {REF} {Length: 2503} {Pfam: F5/8 type C domain [PF00754.27, score=79.3]; Sad1 / UNC-like C-terminal [PF07738.15, score=27.0]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [Score=51.2, Expect=3e-07]} {RNA1509_20089} {RNA1310_38721} {RNA815_6421.1} |
Berezikov Lab - 2020-2021 © ERIBA