TomoSeq data search

Data search

Results for MligTC455_45954

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45954	1793	37.36	Mlig455_008402, Mlig455_008419	Neo: - Age: Down-Up-Up Region-enriched R4: 1.356/0.00665	PDCD5	Mlig455_008402 {REF} {Length: 756} {TRANSSPLICED} {Pfam: Double-stranded DNA-binding domain [PF01984.22, score=92.4]} {Human: ENSG00000105185, PDCD5, programmed cell death 5, [RH, Score=92.8, Expect=5e-25]} {Mouse: ENSMUSG00000030417, Pdcd5, programmed cell death 5, [RH, Score=93.2, Expect=3e-25]} {Dmel: FBgn0036580, PDCD-5, Programmed Cell Death 5, [RH, Score=94.7, Expect=6e-26]} {Celegans: WBGene00008398, D2005.3, [RH, Score=85.5, Expect=2e-22]} {Smed: dd_Smed_v6_2989_0_1, dd_Smed_v6_2989_0_1, [RH, Score=89.0, Expect=4e-24]} {RNA1509_6475} {RNA1310_41588, RNA1509_6475} {RNA1509_6475, RNA815_22842.1} Mlig455_008419 {REF} {Length: 748} {TRANSSPLICED} {Pfam: Double-stranded DNA-binding domain [PF01984.22, score=92.4]} {Human: ENSG00000105185, PDCD5, programmed cell death 5, [RH, Score=92.8, Expect=5e-25]} {Mouse: ENSMUSG00000030417, Pdcd5, programmed cell death 5, [RH, Score=93.2, Expect=3e-25]} {Dmel: FBgn0036580, PDCD-5, Programmed Cell Death 5, [RH, Score=94.7, Expect=6e-26]} {Celegans: WBGene00008398, D2005.3, [RH, Score=85.5, Expect=2e-22]} {Smed: dd_Smed_v6_2989_0_1, dd_Smed_v6_2989_0_1, [RH, Score=89.0, Expect=4e-24]} {RNA1509_6475} {RNA1310_41588} {RNA815_22842.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45954

1793

37.36

Mlig455_008402, Mlig455_008419

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.356/0.00665

PDCD5

Mlig455_008402 {REF} {Length: 756} {TRANSSPLICED} {Pfam: Double-stranded DNA-binding domain [PF01984.22, score=92.4]} {Human: ENSG00000105185, PDCD5, programmed cell death 5, [RH, Score=92.8, Expect=5e-25]} {Mouse: ENSMUSG00000030417, Pdcd5, programmed cell death 5, [RH, Score=93.2, Expect=3e-25]} {Dmel: FBgn0036580, PDCD-5, Programmed Cell Death 5, [RH, Score=94.7, Expect=6e-26]} {Celegans: WBGene00008398, D2005.3, [RH, Score=85.5, Expect=2e-22]} {Smed: dd_Smed_v6_2989_0_1, dd_Smed_v6_2989_0_1, [RH, Score=89.0, Expect=4e-24]} {RNA1509_6475} {RNA1310_41588, RNA1509_6475} {RNA1509_6475, RNA815_22842.1}

Mlig455_008419 {REF} {Length: 748} {TRANSSPLICED} {Pfam: Double-stranded DNA-binding domain [PF01984.22, score=92.4]} {Human: ENSG00000105185, PDCD5, programmed cell death 5, [RH, Score=92.8, Expect=5e-25]} {Mouse: ENSMUSG00000030417, Pdcd5, programmed cell death 5, [RH, Score=93.2, Expect=3e-25]} {Dmel: FBgn0036580, PDCD-5, Programmed Cell Death 5, [RH, Score=94.7, Expect=6e-26]} {Celegans: WBGene00008398, D2005.3, [RH, Score=85.5, Expect=2e-22]} {Smed: dd_Smed_v6_2989_0_1, dd_Smed_v6_2989_0_1, [RH, Score=89.0, Expect=4e-24]} {RNA1509_6475} {RNA1310_41588} {RNA815_22842.1}

Cumulative graph for MligTC455_45954

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.341	5.436	0.64535	1.00000
RegionR2	-0.062	5.436	0.88130	1.00000
RegionR3	0.183	5.436	0.60233	1.00000
RegionR4	1.356	5.436	0.00057	0.00665
RegionR5	0.525	5.436	0.11599	0.33782
RegionR6	0.306	5.436	0.38562	0.96288
RegionR7	-0.262	5.436	0.51564	1.00000
RegionR8	-1.705	5.436	0.00240	0.08353

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-8.743	5.436	0.00308	0.28837
RegenerationR2	-0.257	5.436	0.52752	0.88299
RegenerationR3	-0.251	5.436	0.55288	0.88546
RegenerationR4	-0.775	5.436	0.07877	0.44543
RegenerationR5	-0.411	5.436	0.31524	0.73999
RegenerationR6	-0.043	5.436	0.91824	1.00000
RegenerationBL	0.318	5.436	0.46615	0.83286
RegenerationTP	0.451	5.436	0.36548	0.80407

Genes with expression patterns similar to MligTC455_45954

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45954	1793	37.36	Mlig455_008402, Mlig455_008419	Neo: - Age: Down-Up-Up Region-enriched R4: 1.356/0.00665	PDCD5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008402 {REF} {Length: 756} {TRANSSPLICED} {Pfam: Double-stranded DNA-binding domain [PF01984.22, score=92.4]} {Human: ENSG00000105185, PDCD5, programmed cell death 5, [RH, Score=92.8, Expect=5e-25]} {Mouse: ENSMUSG00000030417, Pdcd5, programmed cell death 5, [RH, Score=93.2, Expect=3e-25]} {Dmel: FBgn0036580, PDCD-5, Programmed Cell Death 5, [RH, Score=94.7, Expect=6e-26]} {Celegans: WBGene00008398, D2005.3, [RH, Score=85.5, Expect=2e-22]} {Smed: dd_Smed_v6_2989_0_1, dd_Smed_v6_2989_0_1, [RH, Score=89.0, Expect=4e-24]} {RNA1509_6475} {RNA1310_41588, RNA1509_6475} {RNA1509_6475, RNA815_22842.1} Mlig455_008419 {REF} {Length: 748} {TRANSSPLICED} {Pfam: Double-stranded DNA-binding domain [PF01984.22, score=92.4]} {Human: ENSG00000105185, PDCD5, programmed cell death 5, [RH, Score=92.8, Expect=5e-25]} {Mouse: ENSMUSG00000030417, Pdcd5, programmed cell death 5, [RH, Score=93.2, Expect=3e-25]} {Dmel: FBgn0036580, PDCD-5, Programmed Cell Death 5, [RH, Score=94.7, Expect=6e-26]} {Celegans: WBGene00008398, D2005.3, [RH, Score=85.5, Expect=2e-22]} {Smed: dd_Smed_v6_2989_0_1, dd_Smed_v6_2989_0_1, [RH, Score=89.0, Expect=4e-24]} {RNA1509_6475} {RNA1310_41588} {RNA815_22842.1}
2.	MligTC455_48053	428	8.91	Mlig455_030322	Neo: - Age: - Region-enriched R5: 1.688/0.01804		1.774	-	-	-	0.951	0.823	-	Mlig455_030322 {REF} {Length: 2055} {TRANSSPLICED} {Smed: dd_Smed_v6_7312_0_1, dd_Smed_v6_7312_0_1, [RH, Score=64.7, Expect=5e-11]} {RNA1509_33109, RNA1509_48332} {RNA1310_20980.1, RNA1509_33109, RNA1509_48332} {RNA1509_33109, RNA1509_48332, RNA815_15206}
3.	MligTC455_51534	1205	25.1	Mlig455_056636	Neo: - Age: -		1.748	-	-	-	0.950	0.798	-	Mlig455_056636 {REF} {Length: 3390} {TRANSSPLICED} {RNA1509_19738, RNA1509_24799, RNA1509_43268, RNA1509_47767, RNA1509_47941, RNA1509_50043} {RNA1310_480.1, RNA1509_19738, RNA1509_24799, RNA1509_43268, RNA1509_47767, RNA1509_47941, RNA1509_50043} {RNA1509_19738, RNA1509_24799, RNA1509_43268, RNA1509_47767, RNA1509_47941, RNA1509_50043, RNA815_1360.1}
4.	MligTC455_44374	9617	200.35	Mlig455_032172, Mlig455_067639	Neo: - Age: Down-Up-Up	C18orf32	0.96	-	-	0.960	-	-	-	Mlig455_032172 {REF} {Length: 534} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4512) [PF14975.8, score=30.2]} {Human: ENSG00000177576, C18orf32, chromosome 18 open reading frame 32, [RH, Score=43.9, Expect=5e-07]} {Mouse: ENSMUSG00000036299, BC031181, cDNA sequence BC031181, [RH, Score=45.4, Expect=1e-07]} {Dmel: FBgn0028746, CG18508, [RH, Score=47.4, Expect=2e-08]} {Smed: dd_Smed_v6_3256_0_1, dd_Smed_v6_3256_0_1, [RH, Score=55.5, Expect=5e-12]} {RNA1509_49168} {RNA1310_65436.2, RNA1509_49168} {RNA1509_49168, RNA815_33641.2} Mlig455_067639 {REF} {Length: 534} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4512) [PF14975.8, score=30.6]} {Human: ENSG00000177576, C18orf32, chromosome 18 open reading frame 32, [RH, Score=43.5, Expect=1e-06]} {Mouse: ENSMUSG00000036299, BC031181, cDNA sequence BC031181, [RH, Score=44.7, Expect=2e-07]} {Dmel: FBgn0028746, CG18508, [RH, Score=46.6, Expect=5e-08]} {Smed: dd_Smed_v6_3256_0_1, dd_Smed_v6_3256_0_1, [RH, Score=54.7, Expect=8e-12]} {RNA1509_15190, RNA1509_27770, RNA1509_28269, RNA1509_3422, RNA1509_42677} {RNA1310_65436.2, RNA1509_15190, RNA1509_27770, RNA1509_28269, RNA1509_3422, RNA1509_42677} {RNA1509_15190, RNA1509_27770, RNA1509_28269, RNA1509_3422, RNA1509_42677, RNA815_33641.2}