TomoSeq data search

Data search

Results for MligTC455_46024

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46024

839

17.48

Mlig455_039211

Neo: -

Age: -

Region-enriched R8: 2.486/0.00519

STOM

Mlig455_039211 {REF} {Length: 3409} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=111.0]; SPFH domain-Band 7 family [PF13421.8, score=19.5]} {Human: ENSG00000148175, STOM, stomatin, [RH, Score=360, Expect=4e-125]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [RH, Score=358, Expect=1e-124]} {Dmel: FBgn0260657, CG42540, [Score=369, Expect=7e-126]} {Celegans: WBGene00003166, mec-2, Mechanosensory protein 2, [RH, Score=389, Expect=1e-135]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [RH, Score=431, Expect=1e-153]} {RNA1509_53294} {RNA1310_20637.1} {RNA815_10589.1}

Cumulative graph for MligTC455_46024

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.506	4.303	0.01233	0.31799
RegionR2	1.685	4.303	0.01089	0.10609
RegionR3	0.51	4.303	0.54589	1.00000
RegionR4	0.207	4.303	0.75759	1.00000
RegionR5	-0.04	4.303	0.86034	1.00000
RegionR6	1.059	4.303	0.13457	0.65878
RegionR7	1.599	4.303	0.01807	0.24665
RegionR8	2.486	4.303	0.00005	0.00519

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	7.595	4.303	0.02435	0.59347
RegenerationR2	-0.098	4.303	0.79975	0.98992
RegenerationR3	0.143	4.303	0.75518	0.96610
RegenerationR4	-0.27	4.303	0.57344	0.90307
RegenerationR5	0.421	4.303	0.35879	0.77070
RegenerationR6	-0.332	4.303	0.46291	0.78015
RegenerationBL	-1.273	4.303	0.01027	0.10248
RegenerationTP	-1.231	4.303	0.01421	0.20386

Genes with expression patterns similar to MligTC455_46024

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46024	839	17.48	Mlig455_039211	Neo: - Age: - Region-enriched R8: 2.486/0.00519	STOM	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039211 {REF} {Length: 3409} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=111.0]; SPFH domain-Band 7 family [PF13421.8, score=19.5]} {Human: ENSG00000148175, STOM, stomatin, [RH, Score=360, Expect=4e-125]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [RH, Score=358, Expect=1e-124]} {Dmel: FBgn0260657, CG42540, [Score=369, Expect=7e-126]} {Celegans: WBGene00003166, mec-2, Mechanosensory protein 2, [RH, Score=389, Expect=1e-135]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [RH, Score=431, Expect=1e-153]} {RNA1509_53294} {RNA1310_20637.1} {RNA815_10589.1}
2.	MligTC455_17279	276	5.75	Mlig455_022365, Mlig455_022451	Neo: - Age: - Region-enriched R2: 3.514/0.00324	KIFC3	2.548	-	-	0.779	0.815	-	0.954	Mlig455_022365 {REF} {Length: 4004} {Pfam: Kinesin motor domain [PF00225.25, score=318.6]; Microtubule binding [PF16796.7, score=153.7]; Chibby family [PF14645.8, score=18.7]} {Human: ENSG00000140859, KIFC3, kinesin family member C3, [RH, Score=279, Expect=5e-81]} {Mouse: ENSMUSG00000031788, Kifc3, kinesin family member C3, [RH, Score=273, Expect=2e-80]} {Dmel: FBgn0002924, ncd, non-claret disjunctional, [RH, Score=238, Expect=7e-68]} {Celegans: WBGene00002216, klp-3, Kinesin-like protein klp-3, [RH, Score=267, Expect=3e-79]} {Smed: dd_Smed_v6_13756_0_3, dd_Smed_v6_13756_0_3, [RH, Score=653, Expect=0.0]} {RNA1509_56664, RNA1509_7607} {RNA1310_3629, RNA1509_56664} {RNA1509_56664, RNA815_4049} Mlig455_022451 {REF} {Length: 4078} {Pfam: Kinesin motor domain [PF00225.25, score=318.5]; Microtubule binding [PF16796.7, score=153.7]; Chibby family [PF14645.8, score=18.7]} {Human: ENSG00000140859, KIFC3, kinesin family member C3, [RH, Score=282, Expect=1e-83]} {Mouse: ENSMUSG00000031788, Kifc3, kinesin family member C3, [RH, Score=277, Expect=6e-82]} {Dmel: FBgn0002924, ncd, non-claret disjunctional, [RH, Score=238, Expect=1e-67]} {Celegans: WBGene00002216, klp-3, Kinesin-like protein klp-3, [RH, Score=265, Expect=1e-78]} {Smed: dd_Smed_v6_13756_0_3, dd_Smed_v6_13756_0_3, [RH, Score=654, Expect=0.0]} {RNA1509_7607} {RNA1310_3629, RNA1509_7607} {RNA1509_7607, RNA815_4049}
3.	MligTC455_48305	889	18.52	Mlig455_061940	Neo: - Age: -		1.803	-	-	-	-	0.852	0.951	Mlig455_061940 {REF} {Length: 764} {NoTransDecoderORF} {RNA1509_29524, RNA1509_47519} {RNA1310_54332, RNA1509_29524, RNA1509_47519} {RNA1509_29524, RNA1509_47519, RNA815_32209}
4.	MligTC455_37448	714	14.87	Mlig455_007744, Mlig455_066068	Neo: - Age: Down-Down-Up	RP1L1	1.773	-	-	-	-	0.785	0.988	Mlig455_007744 {REF} {Length: 3944} {Human: ENSG00000285131, RP1L1, RP1 like 1, [Score=55.1, Expect=1e-06]; ENSG00000196440, ARMCX4, armadillo repeat containing X-linked 4, [Score=53.1, Expect=2e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=85.9, Expect=2e-16]} {Dmel: FBgn0029807, CG3108, [Score=72.4, Expect=2e-12]} {RNA1509_52676} {RNA1310_13856} {RNA815_2540.1} Mlig455_066068 {REF} {Length: 3431} {Human: ENSG00000285131, RP1L1, RP1 like 1, [Score=56.2, Expect=3e-07]; ENSG00000100285, NEFH, neurofilament heavy, [Score=54.3, Expect=1e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=96.7, Expect=7e-20]} {Dmel: FBgn0029807, CG3108, [Score=71.2, Expect=4e-12]} {RNA1509_52676} {RNA1310_13856} {RNA815_18535}
5.	MligTC455_46480	3489	72.68	Mlig455_029170	Neo: - Age: -	PLSCR3	1.772	0.800	-	-	-	-	0.972	Mlig455_029170 {REF} {Length: 1715} {Pfam: Scramblase [PF03803.17, score=198.5]} {Human: ENSG00000284009, PLSCR3, phospholipid scramblase 3, [Score=182, Expect=3e-56]; ENSG00000187838, PLSCR3, phospholipid scramblase 3, [Score=182, Expect=3e-56]} {Mouse: ENSMUSG00000019461, Plscr3, phospholipid scramblase 3, [Score=180, Expect=1e-55]} {Dmel: FBgn0052056, scramb1, scramblase 1, [Score=149, Expect=2e-44]} {Celegans: WBGene00011935, scrm-1, Phospholipid scramblase, [Score=134, Expect=2e-38]} {Smed: dd_Smed_v6_6988_0_1, dd_Smed_v6_6988_0_1, [Score=205, Expect=3e-66]} {RNA1509_24275, RNA1509_6872} {RNA1310_19869.1, RNA1509_24275, RNA1509_6872} {RNA1509_24275, RNA1509_6872, RNA815_8634}
6.	MligTC455_19069	3067	63.89	Mlig455_006883	Neo: - Age: - Region-specific R2: 2.330 Region-enriched R2: 1.710/0.00004 Regeneration-downregulated BL: -1.680 Regeneration-depleted BL: -1.680		1.68	-	-	-	-	0.726	0.954	Mlig455_006883 {REF} {Length: 1337} {RNA1509_18484} {RNA1310_63073.1} {RNA815_40214.1}
7.	MligTC455_40552	2699	56.24	Mlig455_069563	Neo: - Age: logFC(26M/2M)=-0.370 Region-enriched R8: 2.123/0.00000 Region-enriched R2: 1.620/0.00041 Region-enriched R7: 1.568/0.00015 Regeneration-downregulated BL: -1.946 Regeneration-depleted BL: -1.946		1.666	0.712	-	-	-	-	0.954	Mlig455_069563 {REF} {Length: 991} {RNA1509_15221, RNA1509_20766, RNA1509_20891} {RNA1310_40329, RNA1509_15221, RNA1509_20766, RNA1509_20891} {RNA1509_15221, RNA1509_20766, RNA1509_20891, RNA815_19163}
8.	MligTC455_47148	1161	24.18	Mlig455_054041	Neo: - Age: logFC(26M/2M)=-0.290	TTC24	1.666	0.705	-	-	-	-	0.961	Mlig455_054041 {REF} {Length: 2392} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=77.4]; Tetratricopeptide repeat [PF07719.19, score=61.9]; Tetratricopeptide repeat [PF13176.8, score=54.0]; Tetratricopeptide repeat [PF00515.30, score=52.7]; Tetratricopeptide repeat [PF13181.8, score=35.3]; MalT-like TPR region [PF17874.3, score=20.9]} {Human: ENSG00000187862, TTC24, tetratricopeptide repeat domain 24, [RH, Score=102, Expect=5e-22]} {Mouse: ENSMUSG00000051036, Ttc24, tetratricopeptide repeat domain 24, [RH, Score=66.6, Expect=2e-11]} {RNA1509_21506, RNA1509_39716, RNA1509_7768} {RNA1310_13043, RNA1509_21506, RNA1509_39716, RNA1509_7768} {RNA1509_21506, RNA1509_39716, RNA1509_7768, RNA815_789.1}
9.	MligTC455_11611	519	10.8	Mlig455_070577	Neo: - Age: Down-Up-Down		0.971	-	-	-	-	-	0.971	Mlig455_070577 {REF} {Length: 3316} {TRANSSPLICED} {RNA1509_27526, RNA1509_42539} {RNA1310_21583, RNA1509_42539} {RNA1509_42539, RNA815_12355}
10.	MligTC455_45062	1063	22.15	Mlig455_044267	Neo: - Age: -		0.966	-	-	-	-	-	0.966	Mlig455_044267 {REF} {Length: 1936} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=31.9]} {Smed: dd_Smed_v6_2982_0_2, dd_Smed_v6_2982_0_2, [Score=72.0, Expect=1e-14]} {RNA1509_23162, RNA1509_50902} {RNA1310_19283, RNA1509_23162, RNA1509_50902} {RNA1509_23162, RNA1509_50902, RNA815_7600.1}
11.	MligTC455_49898	4613	96.09	Mlig455_029036	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.488		0.965	0.965	-	-	-	-	-	Mlig455_029036 {REF} {Length: 1396} {TRANSSPLICED} {RNA1509_13089, RNA1509_3685, RNA1509_42126, RNA1509_8262} {RNA1310_21028, RNA1509_13089, RNA1509_3685, RNA1509_42126, RNA1509_8262} {RNA1509_13089, RNA1509_3685, RNA1509_42126, RNA1509_8262, RNA815_9990.2}
12.	MligTC455_17958	490	10.21	Mlig455_068231	Neo: - Age: logFC(26M/2M)=-0.406	CCDC83	0.961	-	-	-	-	-	0.961	Mlig455_068231 {REF} {Length: 2825} {Pfam: Domain of unknown function (DUF4618) [PF15397.8, score=19.3]} {Human: ENSG00000150676, CCDC83, coiled-coil domain containing 83, [RH, Score=145, Expect=2e-38]} {Mouse: ENSMUSG00000030617, Ccdc83, coiled-coil domain containing 83, [RH, Score=130, Expect=2e-33]} {Smed: dd_Smed_v6_16528_0_1, dd_Smed_v6_16528_0_1, [RH, Score=96.7, Expect=7e-22]} {RNA1509_34307, RNA1509_49481} {RNA1310_7992.1, RNA1509_34307, RNA1509_49481} {RNA1509_34307, RNA1509_49481, RNA815_3361.1}
13.	MligTC455_18870	1001	20.86	Mlig455_002445, Mlig455_002730	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.707 Region-enriched R2: 2.415/0.00019	DNAH7	0.958	-	-	-	-	-	0.958	Mlig455_002445 {REF} {Length: 13764} {TRANSSPLICED} {Pfam: Dynein heavy chain C-terminal domain [PF18199.3, score=397.0]; P-loop containing dynein motor region D4 [PF12780.9, score=362.4]; ATP-binding dynein motor region [PF12781.9, score=318.6]; P-loop containing dynein motor region [PF12775.9, score=280.4]; Dynein heavy chain AAA lid domain [PF18198.3, score=203.4]; Microtubule-binding stalk of dynein motor [PF12777.9, score=185.3]; Dynein heavy chain AAA lid domain [PF17852.3, score=117.6]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=102.5]; AAA+ lid domain [PF17857.3, score=77.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=51.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.5]; AAA domain [PF13401.8, score=19.5]} {Human: ENSG00000118997, DNAH7, dynein axonemal heavy chain 7, [Score=3468, Expect=0.0]} {Mouse: ENSMUSG00000101337, Dnah7c, dynein, axonemal, heavy chain 7C, [Score=3486, Expect=0.0]; ENSMUSG00000041144, Dnah7b, dynein, axonemal, heavy chain 7B, [Score=3474, Expect=0.0]; ENSMUSG00000096141, Dnah7a, dynein, axonemal, heavy chain 7A, [Score=3472, Expect=0.0]} {Dmel: FBgn0013810, Dhc36C, Dynein heavy chain at 36C, [Score=2909, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=700, Expect=0.0]} {Smed: dd_Smed_v6_5350_0_1, dd_Smed_v6_5350_0_1, [Score=3768, Expect=0.0]} {RNA1509_228} {RNA1310_71} {RNA815_248} Mlig455_002730 {REF} {Length: 420} {Pfam: Dynein heavy chain, N-terminal region 2 [PF08393.15, score=27.2]} {Human: ENSG00000118997, DNAH7, dynein axonemal heavy chain 7, [Score=98.2, Expect=1e-24]} {Mouse: ENSMUSG00000096141, Dnah7a, dynein, axonemal, heavy chain 7A, [Score=100, Expect=2e-25]; ENSMUSG00000041144, Dnah7b, dynein, axonemal, heavy chain 7B, [Score=98.6, Expect=8e-25]; ENSMUSG00000101337, Dnah7c, dynein, axonemal, heavy chain 7C, [Score=97.8, Expect=2e-24]} {Smed: dd_Smed_v6_13792_0_2, dd_Smed_v6_13792_0_2, [Score=102, Expect=2e-26]} {RNA1509_228} {RNA1310_71} {RNA815_34.1}
14.	MligTC455_41933	519	10.82	Mlig455_034108	Neo: - Age: Down-Down-Up		0.958	-	-	-	-	-	0.958	Mlig455_034108 {REF} {Length: 2442} {RNA1509_22399} {RNA1310_1594.1} {RNA815_19978}
15.	MligTC455_19007	1131	23.57	Mlig455_044120	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_044120 {REF} {Length: 3090} {TRANSSPLICED} {Smed: dd_Smed_v6_14979_0_1, dd_Smed_v6_14979_0_1, [RH, Score=170, Expect=8e-50]} {RNA1509_26326, RNA1509_52456} {RNA1310_23856, RNA1509_26326, RNA1509_52456} {RNA1509_26326, RNA1509_52456, RNA815_10081}
16.	MligTC455_23584	574	11.95	Mlig455_050813	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.558	CCDC33	0.957	-	-	-	-	-	0.957	Mlig455_050813 {REF} {Length: 3399} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=24.3]; C-terminal membrane-localisation domain of ion-channel, VCN1 [PF16799.7, score=19.4]} {Human: ENSG00000140481, CCDC33, coiled-coil domain containing 33, [RH, Score=94.4, Expect=4e-19]} {Mouse: ENSMUSG00000037716, Ccdc33, coiled-coil domain containing 33, [Score=145, Expect=4e-35]} {Smed: dd_Smed_v6_15844_0_1, dd_Smed_v6_15844_0_1, [RH, Score=191, Expect=6e-50]} {RNA1509_7141} {RNA1310_15581.1} {RNA815_780.1}
17.	MligTC455_26414	375	7.8	Mlig455_001503	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_001503 {REF} {Length: 3655} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5580) [PF17743.3, score=85.6]} {Smed: dd_Smed_v6_9326_0_1, dd_Smed_v6_9326_0_1, [Score=167, Expect=1e-44]} {RNA1509_4141} {RNA1310_6622.2} {RNA815_8857}
18.	MligTC455_20145	1267	26.4	Mlig455_007027, Mlig455_036512, Mlig455_069138	Neo: - Age: logFC(26M/2M)=-0.924		0.952	-	-	-	-	-	0.952	Mlig455_007027 {REF} {Length: 1363} {RNA1509_29884} {RNA1310_53811} {RNA815_46242} Mlig455_036512 {REF} {Length: 1707} {Pfam: Rdx family [PF10262.11, score=20.7]} {RNA1509_29884, RNA1509_53314} {RNA1310_20554, RNA1509_53314} {RNA1509_53314, RNA815_8810.1} Mlig455_069138 {REF} {Length: 1120} {RNA1509_24021} {RNA1310_53811} {RNA815_46242}
19.	MligTC455_45980	1485	30.93	Mlig455_048042	Neo: - Age: Down-Up-Down	CYP2J2	0.951	-	-	-	-	-	0.951	Mlig455_048042 {REF} {Length: 2693} {Pfam: Cytochrome P450 [PF00067.24, score=306.1]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=225, Expect=5e-67]; ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=223, Expect=7e-66]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=215, Expect=3e-63]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=214, Expect=6e-63]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=233, Expect=5e-70]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=231, Expect=2e-69]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=228, Expect=2e-68]; ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=226, Expect=1e-67]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=230, Expect=8e-69]} {Celegans: WBGene00018413, cyp-33C4, CYtochrome P450 family, [Score=233, Expect=2e-70]} {Smed: dd_Smed_v6_8600_0_1, dd_Smed_v6_8600_0_1, [Score=266, Expect=4e-83]} {RNA1509_45458, RNA1509_8101} {RNA1310_14418, RNA1509_45458, RNA1509_8101} {RNA1509_45458, RNA1509_8101, RNA815_4157.2}

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