TomoSeq data search

Data search

Results for MligTC455_46049

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46049

341

7.11

Mlig455_042345

Neo: -

Age: -

ASL

Mlig455_042345 {REF} {Length: 3876} {TRANSSPLICED} {Pfam: Lyase [PF00206.22, score=307.1]; Argininosuccinate lyase C-terminal [PF14698.8, score=80.4]} {Human: ENSG00000126522, ASL, argininosuccinate lyase, [RH, Score=551, Expect=0.0]} {Mouse: ENSMUSG00000025533, Asl, argininosuccinate lyase, [RH, Score=549, Expect=0.0]} {Dmel: FBgn0032076, CG9510, [RH, Score=462, Expect=3e-160]} {Smed: dd_Smed_v6_3792_0_1, dd_Smed_v6_3792_0_1, [RH, Score=548, Expect=0.0]} {RNA1509_17568} {RNA1310_14270, RNA1509_17568} {RNA1509_17568, RNA815_12164}

Cumulative graph for MligTC455_46049

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.455	3.339	0.69740	1.00000
RegionR2	1.018	3.339	0.05695	0.28663
RegionR3	0.183	3.339	0.63304	1.00000
RegionR4	-1.074	3.339	0.03948	0.16393
RegionR5	0.269	3.339	0.41249	0.77189
RegionR6	-0.35	3.339	0.41151	0.98069
RegionR7	0.121	3.339	0.84542	1.00000
RegionR8	0.288	3.339	0.71750	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.926	3.339	0.36380	1.00000
RegenerationR2	0.009	3.339	0.97887	1.00000
RegenerationR3	0.318	3.339	0.48788	0.85368
RegenerationR4	0.717	3.339	0.13900	0.56047
RegenerationR5	0.303	3.339	0.41174	0.80671
RegenerationR6	0.259	3.339	0.63225	0.88824
RegenerationBL	1.469	3.339	0.01467	0.12669
RegenerationTP	0.538	3.339	0.44355	0.86295

Genes with expression patterns similar to MligTC455_46049

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46049	341	7.11	Mlig455_042345	Neo: - Age: -	ASL	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042345 {REF} {Length: 3876} {TRANSSPLICED} {Pfam: Lyase [PF00206.22, score=307.1]; Argininosuccinate lyase C-terminal [PF14698.8, score=80.4]} {Human: ENSG00000126522, ASL, argininosuccinate lyase, [RH, Score=551, Expect=0.0]} {Mouse: ENSMUSG00000025533, Asl, argininosuccinate lyase, [RH, Score=549, Expect=0.0]} {Dmel: FBgn0032076, CG9510, [RH, Score=462, Expect=3e-160]} {Smed: dd_Smed_v6_3792_0_1, dd_Smed_v6_3792_0_1, [RH, Score=548, Expect=0.0]} {RNA1509_17568} {RNA1310_14270, RNA1509_17568} {RNA1509_17568, RNA815_12164}
2.	MligTC455_16947	1136	23.67	Mlig455_001481	Neo: Irradiation Age: logFC(26M/2M)=0.345 Region-enriched R5: 1.131/0.00263	UBE2C	1.711	-	-	-	-	0.950	0.761	Mlig455_001481 {REF} {Length: 2661} {TRANSSPLICED} {tRNA: Gly(CCC),pseudo, score=24.5} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=106.1]} {Human: ENSG00000175063, UBE2C, ubiquitin conjugating enzyme E2 C, [Score=132, Expect=9e-40]} {Mouse: ENSMUSG00000001403, Ube2c, ubiquitin-conjugating enzyme E2C, [Score=131, Expect=7e-40]} {Dmel: FBgn0264848, vih, vihar, [Score=125, Expect=9e-38]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=93.6, Expect=1e-25]} {Smed: dd_Smed_v6_3846_0_1, dd_Smed_v6_3846_0_1, [Score=104, Expect=5e-30]} {RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558} {RNA1310_35900.2, RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558} {RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558, RNA815_23169.2}
3.	MligTC455_44405	655	13.64	Mlig455_001574	Neo: Neoblast, stringent Age: - Region-enriched R5: 1.701/0.00338	BRCA1	1.675	-	-	-	-	0.958	0.717	Mlig455_001574 {REF} {Length: 3610} {TRANSSPLICED} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=30.0]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=19.1]} {Human: ENSG00000012048, BRCA1, BRCA1, DNA repair associated, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000017146, Brca1, breast cancer 1, early onset, [RH, Score=113, Expect=2e-25]} {Celegans: WBGene00000264, brc-1, BRCa homolog (Tumor suppressor gene Brca1), [RH, Score=68.6, Expect=7e-12]} {RNA1509_8035} {RNA1310_8504.3, RNA1509_8035} {RNA1509_8035, RNA815_13987}
4.	MligTC455_11849	277	5.77	Mlig455_026098	Neo: Int S/G2/M Age: Up-Down-Down	ANAPC1	0.963	-	-	-	-	-	0.963	Mlig455_026098 {REF} {Length: 8230} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 1 [PF12859.9, score=22.7]} {Human: ENSG00000153107, ANAPC1, anaphase promoting complex subunit 1, [RH, Score=204, Expect=5e-52]} {Mouse: ENSMUSG00000014355, Anapc1, anaphase promoting complex subunit 1, [RH, Score=206, Expect=2e-52]} {Dmel: FBgn0004391, shtd, shattered, [RH, Score=214, Expect=3e-55]} {Celegans: WBGene00003133, mat-2, Anaphase-promoting complex subunit 1, [Score=178, Expect=2e-44]} {Smed: dd_Smed_v6_8329_0_1, dd_Smed_v6_8329_0_1, [Score=165, Expect=1e-41]} {RNA1509_37581, RNA1509_9751} {RNA1310_441.1, RNA1509_37581} {RNA1509_37581, RNA815_441.1}
5.	MligTC455_53313	172	3.59	Mlig455_022083	Neo: - Age: -	STK32B	0.954	-	-	-	-	-	0.954	Mlig455_022083 {REF} {Length: 2524} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=187.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=103.0]; Kinase-like [PF14531.8, score=34.9]; Fungal protein kinase [PF17667.3, score=22.0]} {Human: ENSG00000152953, STK32B, serine/threonine kinase 32B, [RH, Score=416, Expect=2e-142]} {Mouse: ENSMUSG00000029123, Stk32b, serine/threonine kinase 32B, [RH, Score=426, Expect=7e-147]; ENSMUSG00000039954, Stk32a, serine/threonine kinase 32A, [RH, Score=422, Expect=2e-145]} {Dmel: FBgn0052944, CG32944, [RH, Score=380, Expect=2e-128]} {Celegans: WBGene00010838, M03C11.1, [RH, Score=336, Expect=2e-112]} {Smed: dd_Smed_v6_6683_0_1, dd_Smed_v6_6683_0_1, [RH, Score=370, Expect=9e-126]} {RNA1509_33504} {RNA1310_15182} {RNA815_6867}
6.	MligTC455_37277	140	2.91	Mlig455_026113	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_026113 {REF} {Length: 3184} {TRANSSPLICED} {RNA1509_43071, RNA1509_51121, RNA1509_52929} {RNA1310_35256, RNA1509_43071, RNA1509_51121, RNA1509_52929} {RNA1509_43071, RNA1509_51121, RNA1509_52929, RNA815_17838}
7.	MligTC455_21536	410	8.53	Mlig455_020151	Neo: Int S/G2/M Age: - Region-enriched R5: 1.818/0.01033	PIGO	0.952	-	-	-	-	-	0.952	Mlig455_020151 {REF} {Length: 4016} {TRANSSPLICED} {Pfam: Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=59.3]; GPI ethanolamine phosphate transferase membrane region [PF19316.1, score=18.1]} {Human: ENSG00000165282, PIGO, phosphatidylinositol glycan anchor biosynthesis class O, [Score=396, Expect=6e-120]} {Mouse: ENSMUSG00000028454, Pigo, phosphatidylinositol glycan anchor biosynthesis, class O, [RH, Score=332, Expect=8e-97]} {Dmel: FBgn0034346, PIG-O, Phosphatidylinositol glycan anchor biosynthesis class O, [RH, Score=303, Expect=9e-87]} {Celegans: WBGene00016159, C27A12.9, [RH, Score=288, Expect=7e-83]} {Smed: dd_Smed_v6_12053_0_1, dd_Smed_v6_12053_0_1, [RH, Score=403, Expect=6e-124]} {RNA1509_21622, RNA1509_29932, RNA1509_58718} {RNA1310_4686, RNA1509_21622, RNA1509_29932, RNA1509_58718} {RNA1509_21622, RNA1509_29932, RNA1509_58718, RNA815_24830}
8.	MligTC455_45124	994	20.71	Mlig455_014599	Neo: - Age: Down-Up-Down Region-enriched R5: 1.195/0.00018	UBE2M	0.952	-	-	-	-	-	0.952	Mlig455_014599 {REF} {Length: 2442} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=134.1]} {Human: ENSG00000130725, UBE2M, ubiquitin conjugating enzyme E2 M, [RH, Score=248, Expect=2e-84]} {Mouse: ENSMUSG00000005575, Ube2m, ubiquitin-conjugating enzyme E2M, [RH, Score=248, Expect=1e-84]} {Dmel: FBgn0035853, UbcE2M, Ubiquitin conjugating enzyme E2M, [RH, Score=239, Expect=2e-81]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=107, Expect=7e-30]} {Smed: dd_Smed_v6_1766_0_1, dd_Smed_v6_1766_0_1, [RH, Score=200, Expect=3e-66]} {RNA1509_4090} {RNA1310_12959, RNA1509_4090} {RNA1509_4090, RNA815_15485.1}
9.	MligTC455_20065	1482	30.87	Mlig455_000221, Mlig455_058479	Neo: - Age: Down-Up-Up	PIGW	0.95	-	-	-	-	-	0.950	Mlig455_000221 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: GWT1 [PF06423.14, score=72.6]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=100, Expect=1e-21]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=115, Expect=4e-27]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=106, Expect=5e-24]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=120, Expect=6e-29]} {RNA1509_19464, RNA1509_29630} {RNA1310_6153, RNA1509_19464, RNA1509_29630} {RNA1509_19464, RNA1509_29630, RNA815_7740} Mlig455_058479 {REF} {Length: 2310} {Pfam: GWT1 [PF06423.14, score=70.1]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=96.7, Expect=1e-20]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=113, Expect=2e-26]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=102, Expect=6e-23]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=119, Expect=1e-28]} {RNA1509_19464} {RNA1310_6153} {RNA815_7740}

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