Data search
Results for MligTC455_44405
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44405 | 655 | 13.64 | Mlig455_001574 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.701/0.00338 |
BRCA1 | Mlig455_001574 {REF} {Length: 3610} {TRANSSPLICED} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=30.0]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=19.1]} {Human: ENSG00000012048, BRCA1, BRCA1, DNA repair associated, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000017146, Brca1, breast cancer 1, early onset, [RH, Score=113, Expect=2e-25]} {Celegans: WBGene00000264, brc-1, BRCa homolog (Tumor suppressor gene Brca1), [RH, Score=68.6, Expect=7e-12]} {RNA1509_8035} {RNA1310_8504.3, RNA1509_8035} {RNA1509_8035, RNA815_13987} |
Cumulative graph for MligTC455_44405
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.005 | 4.185 | 0.02821 | 0.43816 | |
| RegionR2 | 0.651 | 4.185 | 0.35668 | 0.75103 | |
| RegionR3 | 0.585 | 4.185 | 0.31574 | 0.85499 | |
| RegionR4 | 1.254 | 4.185 | 0.02061 | 0.10427 | |
| RegionR5 | 1.701 | 4.185 | 0.00024 | 0.00338 | |
| RegionR6 | 1.218 | 4.185 | 0.02415 | 0.28296 | |
| RegionR7 | -0.201 | 4.185 | 0.80349 | 1.00000 | |
| RegionR8 | -1.203 | 4.185 | 0.26272 | 0.88486 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.579 | 4.185 | 0.59297 | 1.00000 | |
| RegenerationR2 | 0.252 | 4.185 | 0.62852 | 0.92652 | |
| RegenerationR3 | 0.37 | 4.185 | 0.49126 | 0.85446 | |
| RegenerationR4 | 0.144 | 4.185 | 0.78390 | 0.98207 | |
| RegenerationR5 | 0.181 | 4.185 | 0.69375 | 0.94938 | |
| RegenerationR6 | 0.845 | 4.185 | 0.10314 | 0.39783 | |
| RegenerationBL | 1.962 | 4.185 | 0.00056 | 0.01511 | |
| RegenerationTP | 1.115 | 4.185 | 0.15119 | 0.57584 |
Genes with expression patterns similar to MligTC455_44405
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44405 | 655 | 13.64 | Mlig455_001574 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.701/0.00338 |
BRCA1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_001574 {REF} {Length: 3610} {TRANSSPLICED} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=30.0]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=19.1]} {Human: ENSG00000012048, BRCA1, BRCA1, DNA repair associated, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000017146, Brca1, breast cancer 1, early onset, [RH, Score=113, Expect=2e-25]} {Celegans: WBGene00000264, brc-1, BRCa homolog (Tumor suppressor gene Brca1), [RH, Score=68.6, Expect=7e-12]} {RNA1509_8035} {RNA1310_8504.3, RNA1509_8035} {RNA1509_8035, RNA815_13987} |
| 2. | MligTC455_23925 | 7891 | 164.4 | Mlig455_001488 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.391 Region-enriched R5: 1.115/0.00001 Regeneration-enriched BL: 1.604 |
2.461 | 0.721 | - | 0.963 | - | - | 0.777 | Mlig455_001488 {REF} {Length: 1679} {TRANSSPLICED} {RNA1509_12362, RNA1509_21074, RNA1509_37608, RNA1509_490, RNA1509_50533, RNA1509_5748} {RNA1310_18032, RNA1509_12362, RNA1509_21074, RNA1509_37608, RNA1509_490, RNA1509_50533, RNA1509_5748} {RNA1509_12362, RNA1509_21074, RNA1509_37608, RNA1509_490, RNA1509_50533, RNA1509_5748, RNA815_7117} | |
| 3. | MligTC455_49874 | 1741 | 36.27 | Mlig455_010874 | Neo: Irradiation Age: - Regeneration-upregulated R6: 1.474 Regeneration-enriched R6: 1.474 |
WDR75 | 1.82 | - | - | - | 0.956 | - | 0.864 | Mlig455_010874 {REF} {Length: 3479} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=19.7]} {Human: ENSG00000115368, WDR75, WD repeat domain 75, [RH, Score=161, Expect=5e-40]} {Mouse: ENSMUSG00000025995, Wdr75, WD repeat domain 75, [RH, Score=142, Expect=4e-34]} {Dmel: FBgn0284251, l(2)05287, lethal (2) 05287, [RH, Score=94.0, Expect=5e-19]} {Smed: dd_Smed_v6_10851_0_1, dd_Smed_v6_10851_0_1, [RH, Score=80.9, Expect=2e-15]} {RNA1509_3469} {RNA1310_3399.1} {RNA815_2983.1} |
| 4. | MligTC455_49873 | 1720 | 35.83 | Mlig455_010846 | Neo: - Age: Down-Down-Up Regeneration-upregulated R6: 1.542 Regeneration-enriched R6: 1.542 |
WDR75 | 1.814 | - | - | - | 0.952 | - | 0.862 | Mlig455_010846 {REF} {Length: 4136} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=21.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.4]} {Human: ENSG00000115368, WDR75, WD repeat domain 75, [RH, Score=163, Expect=7e-41]} {Mouse: ENSMUSG00000025995, Wdr75, WD repeat domain 75, [RH, Score=143, Expect=1e-34]} {Dmel: FBgn0284251, l(2)05287, lethal (2) 05287, [RH, Score=92.0, Expect=1e-18]} {Smed: dd_Smed_v6_10851_0_1, dd_Smed_v6_10851_0_1, [RH, Score=79.7, Expect=4e-15]} {RNA1509_3469} {RNA1310_3399.1, RNA1509_3469} {RNA1509_3469, RNA815_2983.1} |
| 5. | MligTC455_42764 | 351 | 7.31 | Mlig455_031291, Mlig455_031338 | Neo: - Age: - Region-enriched R4: 2.254/0.02916 |
ALDH16A1 | 1.77 | - | - | 0.954 | 0.816 | - | - | Mlig455_031291 {REF} {Length: 2722} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=65.1]} {Human: ENSG00000161618, ALDH16A1, aldehyde dehydrogenase 16 family member A1, [Score=54.3, Expect=6e-07]} {RNA1509_14483} {RNA1310_10423.1} {RNA815_28466} Mlig455_031338 {REF} {Length: 2766} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=66.0]} {RNA1509_14483, RNA1509_19770} {RNA1310_10423.1, RNA1509_19770} {RNA1509_19770, RNA815_28466} |
| 6. | MligTC455_46157 | 2381 | 49.61 | Mlig455_043690 | Neo: - Age: - Region-enriched R4: 1.390/0.00101 |
EHD1 | 1.735 | - | 0.772 | - | 0.963 | - | - | Mlig455_043690 {REF} {Length: 3391} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5600) [PF18150.3, score=143.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=62.1]; N-terminal EH-domain containing protein [PF16880.7, score=58.8]; Dynamin family [PF00350.25, score=54.1]; 50S ribosome-binding GTPase [PF01926.25, score=34.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.1]; EF hand [PF00036.34, score=20.0]} {Human: ENSG00000110047, EHD1, EH domain containing 1, [RH, Score=709, Expect=0.0]; ENSG00000013016, EHD3, EH domain containing 3, [RH, Score=704, Expect=0.0]; ENSG00000103966, EHD4, EH domain containing 4, [RH, Score=693, Expect=0.0]} {Mouse: ENSMUSG00000024772, Ehd1, EH-domain containing 1, [RH, Score=710, Expect=0.0]; ENSMUSG00000107039, Ehd1, EH-domain containing 1, [RH, Score=710, Expect=0.0]; ENSMUSG00000024065, Ehd3, EH-domain containing 3, [RH, Score=697, Expect=0.0]; ENSMUSG00000027293, Ehd4, EH-domain containing 4, [RH, Score=690, Expect=0.0]} {Dmel: FBgn0016693, Past1, Putative Achaete Scute Target 1, [RH, Score=736, Expect=0.0]} {Celegans: WBGene00004373, rme-1, Receptor Mediated Endocytosis; Receptor-mediated endocytosis 1 isoform I, [RH, Score=729, Expect=0.0]} {Smed: dd_Smed_v6_3148_0_1, dd_Smed_v6_3148_0_1, [RH, Score=739, Expect=0.0]} {RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_2034, RNA1509_22003} {RNA1310_6511.3, RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_22003} {RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_22003, RNA815_5849.2} |
| 7. | MligTC455_17164 | 394 | 8.21 | Mlig455_026943 | Neo: - Age: - Region-enriched R5: 2.625/0.00000 |
1.695 | 0.740 | - | - | - | - | 0.955 | Mlig455_026943 {REF} {Length: 823} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4602) [PF15375.8, score=32.1]} {RNA1509_32047} {RNA1310_28737} {RNA815_21518} | |
| 8. | MligTC455_50593 | 1562 | 32.54 | Mlig455_016015, Mlig455_059733 | Neo: Neoblast, stringent Age: - |
TK2 | 1.683 | - | - | - | 0.726 | - | 0.957 | Mlig455_016015 {REF} {Length: 1538} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=57.7]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [Score=65.9, Expect=3e-13]} {Mouse: ENSMUSG00000014554, Dguok, deoxyguanosine kinase, [Score=62.0, Expect=4e-12]; ENSMUSG00000029366, Dck, deoxycytidine kinase, [Score=59.7, Expect=3e-11]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=70.9, Expect=1e-15]} {RNA1509_10988} {RNA1310_30595.1} {RNA815_13849} Mlig455_059733 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=167.9]; AAA domain [PF13238.8, score=31.5]; AAA domain [PF13671.8, score=24.2]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [Score=166, Expect=1e-49]} {Mouse: ENSMUSG00000035824, Tk2, thymidine kinase 2, mitochondrial, [Score=162, Expect=1e-48]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=167, Expect=3e-51]} {RNA1509_10988} {RNA1310_30595.1} {RNA815_13849} |
| 9. | MligTC455_26917 | 751 | 15.65 | Mlig455_013532, Mlig455_013592 | Neo: Int S/G2/M Age: Up-Down-Up Regeneration-upregulated R6: 2.095 Regeneration-enriched R6: 2.095 |
1.675 | - | - | - | 0.960 | 0.715 | - | Mlig455_013532 {REF} {Length: 3609} {Pfam: Domain of unknown function (DUF3361) [PF11841.10, score=20.4]} {Smed: dd_Smed_v6_61253_0_1, dd_Smed_v6_61253_0_1, [RH, Score=94.7, Expect=5e-20]} {RNA1509_47935} {RNA1310_7792} {RNA815_2467} Mlig455_013592 {REF} {Length: 6693} {Pfam: Domain of unknown function (DUF3361) [PF11841.10, score=19.0]} {RNA1509_47935} {RNA1310_7792} {RNA815_2467} |
|
| 10. | MligTC455_46049 | 341 | 7.11 | Mlig455_042345 | Neo: - Age: - |
ASL | 1.675 | - | - | - | - | 0.958 | 0.717 | Mlig455_042345 {REF} {Length: 3876} {TRANSSPLICED} {Pfam: Lyase [PF00206.22, score=307.1]; Argininosuccinate lyase C-terminal [PF14698.8, score=80.4]} {Human: ENSG00000126522, ASL, argininosuccinate lyase, [RH, Score=551, Expect=0.0]} {Mouse: ENSMUSG00000025533, Asl, argininosuccinate lyase, [RH, Score=549, Expect=0.0]} {Dmel: FBgn0032076, CG9510, [RH, Score=462, Expect=3e-160]} {Smed: dd_Smed_v6_3792_0_1, dd_Smed_v6_3792_0_1, [RH, Score=548, Expect=0.0]} {RNA1509_17568} {RNA1310_14270, RNA1509_17568} {RNA1509_17568, RNA815_12164} |
| 11. | MligTC455_50427 | 158 | 3.28 | Mlig455_063456 | Neo: Neoblast Age: - |
FLAD1 | 0.973 | - | - | - | - | - | 0.973 | Mlig455_063456 {REF} {Length: 2643} {TRANSSPLICED} {Pfam: Probable molybdopterin binding domain [PF00994.26, score=110.7]; Phosphoadenosine phosphosulfate reductase family [PF01507.21, score=96.1]} {Human: ENSG00000160688, FLAD1, flavin adenine dinucleotide synthetase 1, [RH, Score=353, Expect=5e-115]} {Mouse: ENSMUSG00000042642, Flad1, flavin adenine dinucleotide synthetase 1, [RH, Score=368, Expect=1e-120]} {Dmel: FBgn0030431, CG4407, [RH, Score=162, Expect=4e-45]} {Celegans: WBGene00011271, flad-1, Probable FAD synthase Molybdenum cofactor biosynthesis protein-like region FAD synthase region, [RH, Score=313, Expect=8e-100]} {Smed: dd_Smed_v6_8204_0_2, dd_Smed_v6_8204_0_2, [RH, Score=357, Expect=5e-117]} {RNA1509_8816} {RNA1310_9199.1} {RNA815_5028} |
| 12. | MligTC455_08871 | 130 | 2.71 | Mlig455_060086 | Neo: - Age: Down-Up-Up |
0.97 | - | - | - | - | - | 0.970 | Mlig455_060086 {REF} {Length: 2203} {TRANSSPLICED} {RNA1509_33391, RNA1509_36079} {RNA1310_36257, RNA1509_33391} {RNA1509_33391, RNA815_41885} | |
| 13. | MligTC455_22531 | 642 | 13.38 | Mlig455_003820, Mlig455_019969, Mlig455_033265, Mlig455_048427, Mlig455_048495, Mlig455_048570, Mlig455_049044 | Neo: - Age: - |
RAD54L | 0.963 | - | - | - | - | - | 0.963 | Mlig455_003820 {REF} {Length: 560} {Pfam: DDE superfamily endonuclease [PF13358.8, score=40.0]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=79.7, Expect=7e-20]} {RNA1509_20978} {RNA1310_8640} {RNA815_3193.1} Mlig455_019969 {REF} {Length: 1046} {Pfam: Homeodomain-like domain [PF13384.8, score=50.0]; DDE superfamily endonuclease [PF13358.8, score=39.2]; Helix-turn-helix domain [PF13518.8, score=38.4]; Winged helix-turn helix [PF13551.8, score=34.3]; Homeodomain-like domain [PF13565.8, score=30.0]; Transposase [PF01498.20, score=28.3]; Winged helix-turn-helix DNA-binding [PF13412.8, score=24.9]; Helix-turn-helix [PF01381.24, score=20.4]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.0]; CENP-B N-terminal DNA-binding domain [PF04218.15, score=18.1]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=9e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1} Mlig455_033265 {REF} {Length: 560} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-21]} {RNA1509_20978} {RNA1310_8640} {RNA815_3193.1} Mlig455_048427 {REF} {Length: 872} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]; Homeodomain-like domain [PF13384.8, score=21.9]; Transposase [PF01498.20, score=21.2]; Helix-turn-helix [PF01381.24, score=20.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1} Mlig455_048495 {REF} {Length: 3787} {Pfam: SNF2-related domain [PF00176.25, score=206.4]; Helicase conserved C-terminal domain [PF00271.33, score=52.6]; Homeodomain-like domain [PF13384.8, score=44.4]; Helix-turn-helix domain [PF13518.8, score=38.4]; DDE superfamily endonuclease [PF13358.8, score=36.4]; Winged helix-turn helix [PF13551.8, score=31.5]; Type III restriction enzyme, res subunit [PF04851.17, score=29.5]; Rad54 N terminal [PF08658.12, score=27.1]; Homeodomain-like domain [PF13565.8, score=25.8]; Helix-turn-helix [PF01381.24, score=23.9]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=22.0]; Transposase [PF01498.20, score=20.2]} {Human: ENSG00000085999, RAD54L, RAD54 like, [RH, Score=930, Expect=0.0]} {Mouse: ENSMUSG00000028702, Rad54l, RAD54 like (S. cerevisiae), [RH, Score=931, Expect=0.0]} {Dmel: FBgn0002989, okr, okra, [RH, Score=795, Expect=0.0]} {Celegans: WBGene00004298, rad-54, [RH, Score=804, Expect=0.0]} {Smed: dd_Smed_v6_15532_0_1, dd_Smed_v6_15532_0_1, [RH, Score=947, Expect=0.0]} {RNA1509_38919} {RNA1310_7218} {RNA815_1852.1} Mlig455_048570 {REF} {Length: 872} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]; Homeodomain-like domain [PF13384.8, score=21.9]; Transposase [PF01498.20, score=21.2]; Helix-turn-helix [PF01381.24, score=20.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1} Mlig455_049044 {REF} {Length: 965} {Pfam: DDE superfamily endonuclease [PF13358.8, score=37.0]; Homeodomain-like domain [PF13384.8, score=21.1]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.8, Expect=6e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1} |
| 14. | MligTC455_22409 | 207 | 4.32 | Mlig455_020359 | Neo: - Age: logFC(26M/2M)=0.255 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_020359 {REF} {Length: 8226} {TRANSSPLICED} {Smed: dd_Smed_v6_1485_0_1, dd_Smed_v6_1485_0_1, [Score=63.5, Expect=1e-09]} {RNA1509_20025, RNA1509_22652, RNA1509_3320, RNA1509_49475} {RNA1310_645, RNA1509_20025, RNA1509_22652, RNA1509_49475} {RNA1509_20025, RNA1509_22652, RNA1509_49475, RNA815_169.1} | |
| 15. | MligTC455_41996 | 4296 | 89.51 | Mlig455_025810 | Neo: Neoblast Age: - Regeneration-upregulated BL: 1.248 Regeneration-enriched BL: 1.248 |
SNRPD3 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_025810 {REF} {Length: 807} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=47.6]} {Human: ENSG00000100028, SNRPD3, small nuclear ribonucleoprotein D3 polypeptide, [RH, Score=151, Expect=7e-48]} {Mouse: ENSMUSG00000020180, Snrpd3, small nuclear ribonucleoprotein D3, [RH, Score=150, Expect=1e-47]} {Dmel: FBgn0023167, SmD3, Small ribonucleoprotein particle protein SmD3, [RH, Score=155, Expect=2e-49]} {Celegans: WBGene00004914, snr-1, Small nuclear ribonucleoprotein Sm D3, [RH, Score=131, Expect=4e-40]} {Smed: dd_Smed_v6_562_0_1, dd_Smed_v6_562_0_1, [RH, Score=154, Expect=3e-49]} {RNA1509_22790, RNA1509_6528, RNA1509_9362} {RNA1310_44524, RNA1509_22790, RNA1509_9362} {RNA1509_22790, RNA1509_9362, RNA815_21833} |