TomoSeq data search

Data search

Results for MligTC455_46206

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46206

21

0.43

Mlig455_070839

Neo: -

Age: -

THOC2

Mlig455_070839 {REF} {Length: 4753} {TRANSSPLICED} {Pfam: Transcription factor/nuclear export subunit protein 2 [PF11262.10, score=292.4]; THO complex subunit 2 N-terminus [PF16134.7, score=252.7]; Transcription- and export-related complex subunit [PF11732.10, score=77.9]} {Human: ENSG00000125676, THOC2, THO complex 2, [RH, Score=777, Expect=0.0]} {Mouse: ENSMUSG00000079065, BC005561, cDNA sequence BC005561, [RH, Score=788, Expect=0.0]; ENSMUSG00000037475, Thoc2, THO complex 2, [RH, Score=775, Expect=0.0]} {Dmel: FBgn0031390, tho2, [RH, Score=706, Expect=0.0]} {Celegans: WBGene00015813, thoc-2, THO Complex (Transcription factor/nuclear export) subunit, [RH, Score=547, Expect=5e-170]} {Smed: dd_Smed_v6_3159_0_2, dd_Smed_v6_3159_0_2, [RH, Score=769, Expect=0.0]} {RNA1509_3180} {RNA1310_1726} {RNA815_1568}

Cumulative graph for MligTC455_46206

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.845	0.74	0.99961	1.00000
RegionR2	4.261	0.74	0.99987	1.00000
RegionR3	1.038	0.74	0.99991	1.00000
RegionR4	-3.476	0.74	0.99972	1.00000
RegionR5	-0.287	0.74	0.99996	1.00000
RegionR6	0.993	0.74	0.99992	1.00000
RegionR7	1.308	0.74	0.99996	1.00000
RegionR8	1.008	0.74	0.99996	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.959	0.74	0.99989	1.00000
RegenerationR2	2.066	0.74	0.08073	0.45741
RegenerationR3	5.298	0.74	0.00551	0.13401
RegenerationR4	5.327	0.74	0.00447	0.09295
RegenerationR5	4.116	0.74	0.00540	0.13400
RegenerationR6	4.247	0.74	0.01526	0.15215
RegenerationBL	0.504	0.74	0.99991	1.00000
RegenerationTP	0.647	0.74	0.99992	1.00000

Genes with expression patterns similar to MligTC455_46206

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46206	21	0.43	Mlig455_070839	Neo: - Age: -	THOC2	1	-	-	-	-	1.000	-	Mlig455_070839 {REF} {Length: 4753} {TRANSSPLICED} {Pfam: Transcription factor/nuclear export subunit protein 2 [PF11262.10, score=292.4]; THO complex subunit 2 N-terminus [PF16134.7, score=252.7]; Transcription- and export-related complex subunit [PF11732.10, score=77.9]} {Human: ENSG00000125676, THOC2, THO complex 2, [RH, Score=777, Expect=0.0]} {Mouse: ENSMUSG00000079065, BC005561, cDNA sequence BC005561, [RH, Score=788, Expect=0.0]; ENSMUSG00000037475, Thoc2, THO complex 2, [RH, Score=775, Expect=0.0]} {Dmel: FBgn0031390, tho2, [RH, Score=706, Expect=0.0]} {Celegans: WBGene00015813, thoc-2, THO Complex (Transcription factor/nuclear export) subunit, [RH, Score=547, Expect=5e-170]} {Smed: dd_Smed_v6_3159_0_2, dd_Smed_v6_3159_0_2, [RH, Score=769, Expect=0.0]} {RNA1509_3180} {RNA1310_1726} {RNA815_1568}
2.	MligTC455_33275	106	2.2	Mlig455_038868	Neo: - Age: -	SULT1A2	0.969	-	-	-	-	0.969	-	Mlig455_038868 {REF} {Length: 2217} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF00685.29, score=133.6]; Sulfotransferase family [PF13469.8, score=22.8]} {Human: ENSG00000197165, SULT1A2, sulfotransferase family 1A member 2, [Score=113, Expect=1e-28]; ENSG00000173597, SULT1B1, sulfotransferase family 1B member 1, [Score=111, Expect=4e-28]; ENSG00000138068, SULT6B1, sulfotransferase family 6B member 1, [Score=108, Expect=5e-27]} {Mouse: ENSMUSG00000029269, Sult1b1, sulfotransferase family 1B, member 1, [Score=112, Expect=2e-28]; ENSMUSG00000038045, Sult6b1, sulfotransferase family, cytosolic, 6B, member 1, [Score=110, Expect=6e-28]} {Dmel: FBgn0037665, St2, Sulfotransferase 2, [Score=110, Expect=1e-27]} {Smed: dd_Smed_v6_7766_0_1, dd_Smed_v6_7766_0_1, [Score=91.7, Expect=4e-21]} {RNA1509_28198} {RNA1310_25711, RNA1509_28198} {RNA1509_28198, RNA815_26680}
3.	MligTC455_32507	70	1.46	Mlig455_045946, Mlig455_045974	Neo: - Age: -	ANKRD28, TANC2	0.955	-	-	-	-	0.955	-	Mlig455_045946 {REF} {Length: 5238} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=103.9]; Ankyrin repeats (many copies) [PF13637.8, score=84.5]; Ankyrin repeat [PF13606.8, score=60.9]; Ankyrin repeat [PF00023.32, score=55.3]; Ankyrin repeats (many copies) [PF13857.8, score=50.8]; Mab-21 protein [PF03281.16, score=35.4]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=71.2, Expect=8e-12]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=67.8, Expect=1e-10]} {Mouse: ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=67.8, Expect=9e-11]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=63.2, Expect=2e-09]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_8675_0_1, dd_Smed_v6_8675_0_1, [Score=64.3, Expect=3e-10]} {RNA1509_16149} {RNA1310_1248} {RNA815_6874.1} Mlig455_045974 {REF} {Length: 5344} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=103.7]; Ankyrin repeats (many copies) [PF13637.8, score=84.1]; Ankyrin repeat [PF13606.8, score=60.5]; Ankyrin repeat [PF00023.32, score=55.0]; Ankyrin repeats (many copies) [PF13857.8, score=50.4]; Mab-21 protein [PF03281.16, score=35.3]} {Human: ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=67.8, Expect=1e-10]; ENSG00000039560, RAI14, retinoic acid induced 14, [Score=65.1, Expect=8e-10]} {Mouse: ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=67.8, Expect=9e-11]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=62.8, Expect=2e-09]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_8675_0_1, dd_Smed_v6_8675_0_1, [Score=64.7, Expect=3e-10]} {RNA1509_16149} {RNA1310_1248} {RNA815_6874.1}
4.	MligTC455_11174	35	0.73	Mlig455_044360	Neo: - Age: -	ARFIP2	0.951	-	-	-	-	0.951	-	Mlig455_044360 {REF} {Length: 1554} {TRANSSPLICED} {Pfam: Arfaptin-like domain [PF06456.15, score=205.5]} {Human: ENSG00000132254, ARFIP2, ADP ribosylation factor interacting protein 2, [RH, Score=270, Expect=3e-88]; ENSG00000164144, ARFIP1, ADP ribosylation factor interacting protein 1, [RH, Score=268, Expect=5e-87]} {Mouse: ENSMUSG00000030881, Arfip2, ADP-ribosylation factor interacting protein 2, [RH, Score=269, Expect=5e-88]; ENSMUSG00000074513, Arfip1, ADP-ribosylation factor interacting protein 1, [RH, Score=265, Expect=6e-86]; ENSMUSG00000102805, Gm37240, predicted gene, 37240, [RH, Score=262, Expect=1e-86]} {Dmel: FBgn0037884, Arfip, Arfaptin, [RH, Score=262, Expect=3e-85]} {Celegans: WBGene00010040, F54C8.7, [RH, Score=137, Expect=6e-38]} {Smed: dd_Smed_v6_5732_0_1, dd_Smed_v6_5732_0_1, [RH, Score=234, Expect=2e-75]} {RNA1509_22952} {RNA1310_13386} {RNA815_7638}
5.	MligTC455_26941	8	0.16	Mlig455_040102	Neo: - Age: Down-Up-Down		0.951	-	-	-	-	0.951	-	Mlig455_040102 {REF} {Length: 3150} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.5]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=72.4, Expect=3e-13]} {RNA1509_27849} {RNA1310_5710.1} {RNA815_6291.1}
6.	MligTC455_34044	238	4.95	Mlig455_012090	Neo: Int S/G2/M Age: -	HENMT1	0.95	-	-	-	-	0.950	-	Mlig455_012090 {REF} {Length: 3192} {TRANSSPLICED} {Human: ENSG00000162639, HENMT1, HEN methyltransferase 1, [RH, Score=169, Expect=8e-48]} {Mouse: ENSMUSG00000045662, Henmt1, HEN1 methyltransferase homolog 1 (Arabidopsis), [RH, Score=167, Expect=3e-47]} {Dmel: FBgn0033686, Hen1, Hen1 methyltransferase, [Score=145, Expect=3e-39]} {Celegans: WBGene00015349, henn-1, HEN1 (RNA 3'end methyltransferase) of Nematode, [RH, Score=98.6, Expect=3e-22]} {Smed: dd_Smed_v6_8622_0_1, dd_Smed_v6_8622_0_1, [RH, Score=120, Expect=4e-30]} {RNA1509_30430} {RNA1310_19962.1} {RNA815_9382}

Berezikov Lab - 2020-2021 © ERIBA