TomoSeq data search

Data search

Results for MligTC455_46248

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46248

1490

31.04

Mlig455_013803, Mlig455_070884

Neo: -

Age: Down-Up-Down

HTR1A

Mlig455_013803 {REF} {Length: 3026} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=266.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=46.3]} {Human: ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=224, Expect=3e-68]; ENSG00000135312, HTR1B, 5-hydroxytryptamine receptor 1B, [Score=222, Expect=1e-67]; ENSG00000179546, HTR1D, 5-hydroxytryptamine receptor 1D, [Score=221, Expect=1e-67]; ENSG00000179097, HTR1F, 5-hydroxytryptamine receptor 1F, [Score=217, Expect=4e-66]; ENSG00000148680, HTR7, 5-hydroxytryptamine receptor 7, [Score=216, Expect=5e-65]; ENSG00000169252, ADRB2, adrenoceptor beta 2, [Score=213, Expect=9e-64]} {Mouse: ENSMUSG00000021721, Htr1a, 5-hydroxytryptamine (serotonin) receptor 1A, [Score=228, Expect=1e-69]} {Dmel: FBgn0004573, 5-HT7, 5-hydroxytryptamine (serotonin) receptor 7, [RH, Score=280, Expect=2e-88]} {Celegans: WBGene00004780, ser-7, SERotonin/octopamine receptor family, [RH, Score=226, Expect=4e-69]} {Smed: dd_Smed_v6_16752_0_1, dd_Smed_v6_16752_0_1, [Score=373, Expect=8e-125]} {RNA1509_15786, RNA1509_53758} {RNA1310_6503, RNA1509_15786, RNA1509_53758} {RNA1509_15786, RNA1509_53758, RNA815_5855}

Mlig455_070884 {REF} {Length: 3086} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=266.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=46.3]} {Human: ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=224, Expect=4e-68]; ENSG00000135312, HTR1B, 5-hydroxytryptamine receptor 1B, [Score=222, Expect=1e-67]; ENSG00000179546, HTR1D, 5-hydroxytryptamine receptor 1D, [Score=221, Expect=1e-67]; ENSG00000179097, HTR1F, 5-hydroxytryptamine receptor 1F, [Score=217, Expect=5e-66]; ENSG00000148680, HTR7, 5-hydroxytryptamine receptor 7, [Score=216, Expect=5e-65]; ENSG00000169252, ADRB2, adrenoceptor beta 2, [Score=213, Expect=7e-64]} {Mouse: ENSMUSG00000021721, Htr1a, 5-hydroxytryptamine (serotonin) receptor 1A, [Score=228, Expect=1e-69]} {Dmel: FBgn0004573, 5-HT7, 5-hydroxytryptamine (serotonin) receptor 7, [RH, Score=280, Expect=2e-88]} {Celegans: WBGene00004780, ser-7, SERotonin/octopamine receptor family, [RH, Score=226, Expect=4e-69]} {Smed: dd_Smed_v6_16752_0_1, dd_Smed_v6_16752_0_1, [Score=373, Expect=9e-125]} {RNA1509_15786} {RNA1310_6503} {RNA815_5855}

Cumulative graph for MligTC455_46248

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.012	5.125	0.12178	0.71550
RegionR2	0.832	5.125	0.11446	0.41832
RegionR3	0.264	5.125	0.56205	1.00000
RegionR4	0.732	5.125	0.18225	0.45345
RegionR5	-0.537	5.125	0.26989	0.59425
RegionR6	0.186	5.125	0.68844	1.00000
RegionR7	0.791	5.125	0.10380	0.61286
RegionR8	-0.254	5.125	0.70053	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.036	5.125	0.17791	0.91937
RegenerationR2	0.507	5.125	0.31437	0.75344
RegenerationR3	0.458	5.125	0.40695	0.80699
RegenerationR4	-0.551	5.125	0.32898	0.76395
RegenerationR5	0.849	5.125	0.11465	0.50990
RegenerationR6	0.442	5.125	0.42127	0.75212
RegenerationBL	-0.05	5.125	0.92366	1.00000
RegenerationTP	1.169	5.125	0.02682	0.27578

Genes with expression patterns similar to MligTC455_46248

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46248	1490	31.04	Mlig455_013803, Mlig455_070884	Neo: - Age: Down-Up-Down	HTR1A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013803 {REF} {Length: 3026} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=266.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=46.3]} {Human: ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=224, Expect=3e-68]; ENSG00000135312, HTR1B, 5-hydroxytryptamine receptor 1B, [Score=222, Expect=1e-67]; ENSG00000179546, HTR1D, 5-hydroxytryptamine receptor 1D, [Score=221, Expect=1e-67]; ENSG00000179097, HTR1F, 5-hydroxytryptamine receptor 1F, [Score=217, Expect=4e-66]; ENSG00000148680, HTR7, 5-hydroxytryptamine receptor 7, [Score=216, Expect=5e-65]; ENSG00000169252, ADRB2, adrenoceptor beta 2, [Score=213, Expect=9e-64]} {Mouse: ENSMUSG00000021721, Htr1a, 5-hydroxytryptamine (serotonin) receptor 1A, [Score=228, Expect=1e-69]} {Dmel: FBgn0004573, 5-HT7, 5-hydroxytryptamine (serotonin) receptor 7, [RH, Score=280, Expect=2e-88]} {Celegans: WBGene00004780, ser-7, SERotonin/octopamine receptor family, [RH, Score=226, Expect=4e-69]} {Smed: dd_Smed_v6_16752_0_1, dd_Smed_v6_16752_0_1, [Score=373, Expect=8e-125]} {RNA1509_15786, RNA1509_53758} {RNA1310_6503, RNA1509_15786, RNA1509_53758} {RNA1509_15786, RNA1509_53758, RNA815_5855} Mlig455_070884 {REF} {Length: 3086} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=266.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=46.3]} {Human: ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=224, Expect=4e-68]; ENSG00000135312, HTR1B, 5-hydroxytryptamine receptor 1B, [Score=222, Expect=1e-67]; ENSG00000179546, HTR1D, 5-hydroxytryptamine receptor 1D, [Score=221, Expect=1e-67]; ENSG00000179097, HTR1F, 5-hydroxytryptamine receptor 1F, [Score=217, Expect=5e-66]; ENSG00000148680, HTR7, 5-hydroxytryptamine receptor 7, [Score=216, Expect=5e-65]; ENSG00000169252, ADRB2, adrenoceptor beta 2, [Score=213, Expect=7e-64]} {Mouse: ENSMUSG00000021721, Htr1a, 5-hydroxytryptamine (serotonin) receptor 1A, [Score=228, Expect=1e-69]} {Dmel: FBgn0004573, 5-HT7, 5-hydroxytryptamine (serotonin) receptor 7, [RH, Score=280, Expect=2e-88]} {Celegans: WBGene00004780, ser-7, SERotonin/octopamine receptor family, [RH, Score=226, Expect=4e-69]} {Smed: dd_Smed_v6_16752_0_1, dd_Smed_v6_16752_0_1, [Score=373, Expect=9e-125]} {RNA1509_15786} {RNA1310_6503} {RNA815_5855}
2.	MligTC455_47076	6324	131.75	Mlig455_049363, Mlig455_062303	Neo: - Age: - Region-enriched R7: 1.683/0.00000 Region-enriched R8: 1.485/0.00004 Regeneration-downregulated BL: -2.842 Regeneration-depleted BL: -2.842	TPPP3	1.761	-	-	-	-	0.957	0.804	Mlig455_049363 {REF} {Length: 984} {TRANSSPLICED} {Pfam: p25-alpha [PF05517.14, score=133.7]} {Human: ENSG00000159713, TPPP3, tubulin polymerization promoting protein family member 3, [RH, Score=99.4, Expect=4e-26]; ENSG00000171368, TPPP, tubulin polymerization promoting protein, [RH, Score=97.4, Expect=5e-25]; ENSG00000179636, TPPP2, tubulin polymerization promoting protein family member 2, [RH, Score=96.3, Expect=5e-25]} {Mouse: ENSMUSG00000008813, Tppp2, tubulin polymerization-promoting protein family member 2, [RH, Score=99.4, Expect=2e-26]; ENSMUSG00000014846, Tppp3, tubulin polymerization-promoting protein family member 3, [RH, Score=95.5, Expect=7e-25]; ENSMUSG00000021573, Tppp, tubulin polymerization promoting protein, [RH, Score=95.1, Expect=3e-24]} {Dmel: FBgn0266417, ringer, ringmaker, [RH, Score=80.5, Expect=5e-19]} {Celegans: WBGene00016321, tppp-1, Tubulin polymerization-promoting protein homolog, [RH, Score=76.6, Expect=7e-18]} {Smed: dd_Smed_v6_650_0_1, dd_Smed_v6_650_0_1, [Score=157, Expect=1e-49]} {RNA1509_3848} {RNA1310_35760.1} {RNA815_16956.1} Mlig455_062303 {REF} {Length: 992} {TRANSSPLICED} {Pfam: p25-alpha [PF05517.14, score=133.7]} {Human: ENSG00000159713, TPPP3, tubulin polymerization promoting protein family member 3, [RH, Score=99.4, Expect=4e-26]; ENSG00000171368, TPPP, tubulin polymerization promoting protein, [RH, Score=97.4, Expect=5e-25]; ENSG00000179636, TPPP2, tubulin polymerization promoting protein family member 2, [RH, Score=96.3, Expect=5e-25]} {Mouse: ENSMUSG00000008813, Tppp2, tubulin polymerization-promoting protein family member 2, [RH, Score=99.4, Expect=2e-26]; ENSMUSG00000014846, Tppp3, tubulin polymerization-promoting protein family member 3, [RH, Score=95.5, Expect=7e-25]; ENSMUSG00000021573, Tppp, tubulin polymerization promoting protein, [RH, Score=95.1, Expect=3e-24]} {Dmel: FBgn0266417, ringer, ringmaker, [RH, Score=80.5, Expect=5e-19]} {Celegans: WBGene00016321, tppp-1, Tubulin polymerization-promoting protein homolog, [RH, Score=76.6, Expect=7e-18]} {Smed: dd_Smed_v6_650_0_1, dd_Smed_v6_650_0_1, [Score=157, Expect=1e-49]} {RNA1509_3848} {RNA1310_35760.1, RNA1509_3848} {RNA1509_3848, RNA815_16956.1}
3.	MligTC455_54055	4842	100.87	Mlig455_036551, Mlig455_057816	Neo: - Age: Down-Down-Up Region-enriched R7: 1.124/0.01609 Regeneration-downregulated BL: -2.493 Regeneration-depleted BL: -2.493		0.963	-	-	-	-	0.963	-	Mlig455_036551 {REF} {Length: 741} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457} Mlig455_057816 {REF} {Length: 624} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457}
4.	MligTC455_24967	11744	244.66	Mlig455_003878	Neo: - Age: -	EIF1AY	0.958	-	-	-	-	0.958	-	Mlig455_003878 {REF} {Length: 1513} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.21, score=83.0]} {Human: ENSG00000198692, EIF1AY, eukaryotic translation initiation factor 1A Y-linked, [RH, Score=204, Expect=2e-68]; ENSG00000173674, EIF1AX, eukaryotic translation initiation factor 1A X-linked, [RH, Score=204, Expect=2e-68]} {Mouse: ENSMUSG00000067194, Eif1ax, eukaryotic translation initiation factor 1A, X-linked, [RH, Score=204, Expect=2e-68]; ENSMUSG00000057561, Eif1a, eukaryotic translation initiation factor 1A, [RH, Score=203, Expect=7e-68]; ENSMUSG00000113805, Gm5788, predicted pseudogene 5788, [RH, Score=202, Expect=2e-67]; ENSMUSG00000113201, Gm21936, predicted gene, 21936, [RH, Score=202, Expect=1e-67]; ENSMUSG00000093847, Gm5039, predicted gene 5039, [RH, Score=202, Expect=2e-67]; ENSMUSG00000072905, Gm2016, predicted gene 2016, [RH, Score=201, Expect=5e-67]; ENSMUSG00000079034, Gm8300, predicted gene 8300, [RH, Score=200, Expect=8e-67]; ENSMUSG00000079029, Gm5662, predicted gene 5662, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095799, Gm8332, predicted pseudogene 8332, [RH, Score=200, Expect=8e-67]; ENSMUSG00000095717, Gm2056, predicted gene 2056, [RH, Score=199, Expect=3e-66]; ENSMUSG00000096049, Gm2075, predicted gene 2075, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096803, Gm6803, predicted gene 6803, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096619, Gm2035, predicted pseudogene 2035, [RH, Score=195, Expect=1e-64]; ENSMUSG00000113971, Gm2022, predicted pseudogene 2022, [RH, Score=194, Expect=2e-64]} {Dmel: FBgn0026250, eIF1A, eukaryotic translation initiation factor 1A, [RH, Score=217, Expect=1e-73]} {Celegans: WBGene00019162, eif-1.A, Eukaryotic Initiation Factor, [RH, Score=189, Expect=7e-62]} {Smed: dd_Smed_v6_334_0_1, dd_Smed_v6_334_0_1, [RH, Score=225, Expect=3e-76]} {RNA1509_23718, RNA1509_30574, RNA1509_50724, RNA1509_560, RNA1509_58441} {RNA1310_31581, RNA1509_23718, RNA1509_30574, RNA1509_50724, RNA1509_560, RNA1509_58441} {RNA1509_23718, RNA1509_30574, RNA1509_50724, RNA1509_560, RNA1509_58441, RNA815_13282}
5.	MligTC455_24968	11910	248.12	Mlig455_003668	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.637	EIF1AY	0.956	-	-	-	-	0.956	-	Mlig455_003668 {REF} {Length: 1512} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.21, score=83.0]} {Human: ENSG00000198692, EIF1AY, eukaryotic translation initiation factor 1A Y-linked, [RH, Score=204, Expect=2e-68]; ENSG00000173674, EIF1AX, eukaryotic translation initiation factor 1A X-linked, [RH, Score=204, Expect=2e-68]} {Mouse: ENSMUSG00000067194, Eif1ax, eukaryotic translation initiation factor 1A, X-linked, [RH, Score=204, Expect=1e-68]; ENSMUSG00000057561, Eif1a, eukaryotic translation initiation factor 1A, [RH, Score=203, Expect=7e-68]; ENSMUSG00000113201, Gm21936, predicted gene, 21936, [RH, Score=202, Expect=1e-67]; ENSMUSG00000093847, Gm5039, predicted gene 5039, [RH, Score=202, Expect=2e-67]; ENSMUSG00000113805, Gm5788, predicted pseudogene 5788, [RH, Score=202, Expect=1e-67]; ENSMUSG00000072905, Gm2016, predicted gene 2016, [RH, Score=201, Expect=4e-67]; ENSMUSG00000079029, Gm5662, predicted gene 5662, [RH, Score=200, Expect=7e-67]; ENSMUSG00000079034, Gm8300, predicted gene 8300, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095799, Gm8332, predicted pseudogene 8332, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095717, Gm2056, predicted gene 2056, [RH, Score=199, Expect=3e-66]; ENSMUSG00000096803, Gm6803, predicted gene 6803, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096049, Gm2075, predicted gene 2075, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096619, Gm2035, predicted pseudogene 2035, [RH, Score=195, Expect=1e-64]; ENSMUSG00000113971, Gm2022, predicted pseudogene 2022, [RH, Score=194, Expect=2e-64]} {Dmel: FBgn0026250, eIF1A, eukaryotic translation initiation factor 1A, [RH, Score=217, Expect=2e-73]} {Celegans: WBGene00019162, eif-1.A, Eukaryotic Initiation Factor, [RH, Score=189, Expect=7e-62]} {Smed: dd_Smed_v6_334_0_1, dd_Smed_v6_334_0_1, [RH, Score=225, Expect=2e-76]} {RNA1509_560} {RNA1310_31581} {RNA815_13282}
6.	MligTC455_24552	1774	36.95	Mlig455_015821, Mlig455_015828	Neo: - Age: Up-Up-Up	IQCE	0.954	-	-	-	0.954	-	-	Mlig455_015821 {REF} {Length: 2698} {TRANSSPLICED} {Pfam: Fez1 [PF06818.17, score=21.8]; IQ calmodulin-binding motif [PF00612.29, score=21.0]} {Human: ENSG00000106012, IQCE, IQ motif containing E, [RH, Score=127, Expect=5e-30]} {Mouse: ENSMUSG00000036555, Iqce, IQ motif containing E, [RH, Score=128, Expect=1e-30]} {Smed: dd_Smed_v6_7345_0_1, dd_Smed_v6_7345_0_1, [RH, Score=73.6, Expect=7e-14]} {RNA1509_3714} {RNA1310_6916.1} {RNA815_2091.1} Mlig455_015828 {REF} {Length: 2744} {TRANSSPLICED} {Pfam: Fez1 [PF06818.17, score=21.8]; IQ calmodulin-binding motif [PF00612.29, score=21.0]} {Human: ENSG00000106012, IQCE, IQ motif containing E, [RH, Score=127, Expect=5e-30]} {Mouse: ENSMUSG00000036555, Iqce, IQ motif containing E, [RH, Score=128, Expect=1e-30]} {Smed: dd_Smed_v6_7345_0_1, dd_Smed_v6_7345_0_1, [RH, Score=73.6, Expect=7e-14]} {RNA1509_3714} {RNA1310_6916.1, RNA1509_3714} {RNA1509_3714, RNA815_2091.1}
7.	MligTC455_24553	855	17.8	Mlig455_023662	Neo: - Age: logFC(26M/2M)=-1.366	IQCE	0.951	-	-	-	0.951	-	-	Mlig455_023662 {REF} {Length: 4080} {TRANSSPLICED} {Human: ENSG00000106012, IQCE, IQ motif containing E, [Score=102, Expect=4e-23]} {Mouse: ENSMUSG00000036555, Iqce, IQ motif containing E, [Score=102, Expect=5e-23]} {Smed: dd_Smed_v6_7345_0_1, dd_Smed_v6_7345_0_1, [Score=65.1, Expect=1e-11]} {RNA1509_3714} {RNA1310_6916.1} {RNA815_2091.1}

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