M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_54055

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_54055 4842 100.87 Mlig455_036551, Mlig455_057816

Neo: -

Age: Down-Down-Up

Region-enriched R7: 1.124/0.01609

Regeneration-downregulated BL: -2.493

Regeneration-depleted BL: -2.493

Mlig455_036551 {REF} {Length: 741} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457}

Mlig455_057816 {REF} {Length: 624} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457}

Cumulative graph for MligTC455_54055

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.336 6.724 0.02564 0.42340
RegionR2 -0.595 6.724 0.13326 0.45315
RegionR3 -0.412 6.724 0.23524 0.77670
RegionR4 0.124 6.724 0.75036 1.00000
RegionR5 -0.253 6.724 0.45999 0.82211
RegionR6 0.276 6.724 0.41081 0.98010
RegionR7 1.124 6.724 0.00037 0.01609
RegionR8 1.072 6.724 0.00227 0.08096

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.747 6.724 0.35806 1.00000
RegenerationR2 -0.324 6.724 0.43579 0.83767
RegenerationR3 -0.291 6.724 0.50088 0.85742
RegenerationR4 -0.436 6.724 0.32090 0.75931
RegenerationR5 -0.034 6.724 0.93640 1.00000
RegenerationR6 -1.276 6.724 0.00404 0.07607
RegenerationBL -2.493 6.724 0.00000 0.00001 Specific for BL: -2.493
RegenerationTP -0.248 6.724 0.53304 0.92272


Genes with expression patterns similar to MligTC455_54055

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_54055 4842 100.87 Mlig455_036551, Mlig455_057816

Neo: -

Age: Down-Down-Up

Region-enriched R7: 1.124/0.01609

Regeneration-downregulated BL: -2.493

Regeneration-depleted BL: -2.493

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_036551 {REF} {Length: 741} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457}

Mlig455_057816 {REF} {Length: 624} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457}
2. MligTC455_27008 8324 173.42 Mlig455_051158

Neo: -

Age: logFC(26M/2M)=-0.527

Region-enriched R8: 1.630/0.00003
Region-enriched R7: 1.539/0.00001

Regeneration-downregulated BL: -2.332

Regeneration-depleted BL: -2.332

 4.432 0.735 0.918 0.862 0.942 0.975 - Mlig455_051158 {REF} {Length: 1814} {RNA1509_1724, RNA1509_21165, RNA1509_9726} {RNA1310_64493.1, RNA1509_1724, RNA1509_21165, RNA1509_9726} {RNA1509_1724, RNA1509_21165, RNA1509_9726, RNA815_32985}
3. MligTC455_27009 8839 184.14 Mlig455_010173, Mlig455_049558, Mlig455_060691

Neo: -

Age: Up-Down-Up

 AC079594.2 4.24 - 0.720 0.826 0.949 0.957 0.788

Mlig455_010173 {REF} {Length: 609} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=36.1]; RING-type zinc-finger [PF13445.8, score=35.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=29.9]; Ring finger domain [PF13639.8, score=29.6]; zinc-RING finger domain [PF14634.8, score=27.9]; Prokaryotic RING finger family 4 [PF14447.8, score=22.9]; Zinc finger-containing protein [PF10146.11, score=20.0]; RING/Ubox like zinc-binding domain [PF14570.8, score=19.9]} {Human: ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=60.5, Expect=1e-10]; ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=60.5, Expect=1e-10]} {Mouse: ENSMUSG00000034317, Trim59, tripartite motif-containing 59, [Score=54.3, Expect=9e-09]; ENSMUSG00000020707, Rnf135, ring finger protein 135, [Score=53.1, Expect=2e-08]} {Dmel: FBgn0040294, POSH, Plenty of SH3s, [Score=55.1, Expect=5e-09]} {Celegans: WBGene00010000, F53F8.3, [RH, Score=50.8, Expect=5e-08]} {Smed: dd_Smed_v6_14782_0_2, dd_Smed_v6_14782_0_2, [Score=55.8, Expect=9e-10]} {RNA1509_16497} {RNA1310_64493.2} {RNA815_32985}

Mlig455_049558 {REF} {Length: 3804} {Pfam: Replication protein A OB domain [PF16900.7, score=47.7]; RING-type zinc-finger [PF13445.8, score=34.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=33.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=33.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=29.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.7]; zinc-RING finger domain [PF14634.8, score=28.4]; Ring finger domain [PF13639.8, score=28.2]; Prokaryotic RING finger family 4 [PF14447.8, score=22.7]; Zinc finger-containing protein [PF10146.11, score=19.4]; RING/Ubox like zinc-binding domain [PF14570.8, score=18.9]} {Human: ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=61.2, Expect=1e-09]; ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=60.8, Expect=7e-10]} {Mouse: ENSMUSG00000020707, Rnf135, ring finger protein 135, [Score=55.5, Expect=3e-08]; ENSMUSG00000034317, Trim59, tripartite motif-containing 59, [Score=54.7, Expect=6e-08]} {Dmel: FBgn0040294, POSH, Plenty of SH3s, [Score=53.9, Expect=1e-07]} {Smed: dd_Smed_v6_14782_0_1, dd_Smed_v6_14782_0_1, [Score=58.2, Expect=1e-09]} {RNA1509_6640} {RNA1310_4236} {RNA815_207.1}

Mlig455_060691 {REF} {Length: 990} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.7]; RING-type zinc-finger [PF13445.8, score=35.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=31.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.7]; zinc-RING finger domain [PF14634.8, score=29.6]; Ring finger domain [PF13639.8, score=29.5]; Prokaryotic RING finger family 4 [PF14447.8, score=25.1]; RING/Ubox like zinc-binding domain [PF14570.8, score=20.9]; Zinc finger-containing protein [PF10146.11, score=20.3]} {Human: ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=60.1, Expect=1e-10]; ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=60.1, Expect=1e-10]} {Mouse: ENSMUSG00000020707, Rnf135, ring finger protein 135, [Score=55.1, Expect=5e-09]; ENSMUSG00000034317, Trim59, tripartite motif-containing 59, [Score=53.9, Expect=1e-08]} {Dmel: FBgn0040294, POSH, Plenty of SH3s, [Score=51.6, Expect=6e-08]} {Celegans: WBGene00004380, rnf-1, RiNg Finger protein, [Score=44.7, Expect=1e-05]} {Smed: dd_Smed_v6_14782_0_2, dd_Smed_v6_14782_0_2, [Score=57.0, Expect=3e-10]} {RNA1509_16497} {RNA1310_64493.2} {RNA815_32985}
4. MligTC455_13936 11386 237.2 Mlig455_013698, Mlig455_058965

Neo: -

Age: Down-Down-Up

 TANC2 3.34 0.701 - 0.749 0.938 0.952 -

Mlig455_013698 {REF} {Length: 1209} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=46.8]; Ankyrin repeats (many copies) [PF13637.8, score=43.9]; Ankyrin repeats (many copies) [PF13857.8, score=32.7]; Ankyrin repeat [PF13606.8, score=25.7]; Ankyrin repeat [PF00023.32, score=20.2]} {Human: ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=73.9, Expect=1e-13]} {Mouse: ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=74.3, Expect=4e-14]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=70.9, Expect=8e-13]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=50.1, Expect=2e-06]} {Smed: dd_Smed_v6_8675_0_1, dd_Smed_v6_8675_0_1, [Score=63.5, Expect=9e-11]}

Mlig455_058965 {REF} {Length: 622} {RNA1509_1660} {RNA1310_53745.2} {RNA815_10864.1}
5. MligTC455_31500 68794 1433.2 Mlig455_056588

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.608

Region-enriched R8: 1.796/0.00003
Region-enriched R7: 1.515/0.00066

 3.302 0.715 0.951 - 0.745 0.891 - Mlig455_056588 {REF} {Length: 1680} {RNA1509_12033, RNA1509_22590} {RNA1310_32308, RNA1509_22590} {RNA1509_22590, RNA815_5913.2}
6. MligTC455_31501 69489 1447.68 Mlig455_056609

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=0.808

Region-enriched R8: 1.785/0.00008
Region-enriched R7: 1.515/0.00130

 3.299 0.713 0.951 - 0.745 0.890 - Mlig455_056609 {REF} {Length: 1337} {RNA1509_38749, RNA1509_41088} {RNA1310_32308, RNA1509_41088} {RNA1509_41088, RNA815_5913.2}
7. MligTC455_27349 21427 446.4 Mlig455_034721

Neo: -

Age: logFC(26M/2M)=-0.561

 2.679 - 0.958 - 0.763 0.958 - Mlig455_034721 {REF} {Length: 925} {RNA1509_5063} {RNA1310_76724, RNA1509_5063} {RNA1509_5063, RNA815_2813.2}
8. MligTC455_07421 19136 398.66 Mlig455_029662

Neo: -

Age: Down-Up-Up

Region-specific R8: 3.646

Region-enriched R8: 3.196/0.00000
Region-enriched R7: 1.280/0.00593

 SLC25A24 2.619 - 0.931 0.720 - 0.968 - Mlig455_029662 {REF} {Length: 528} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=52.9]; EF hand [PF13202.8, score=51.2]; EF-hand domain pair [PF13499.8, score=51.0]; EF-hand domain [PF13405.8, score=41.8]; EF-hand domain pair [PF13833.8, score=41.6]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.1]; Family of unknown function (DUF5766) [PF19070.2, score=19.0]} {Human: ENSG00000085491, SLC25A24, solute carrier family 25 member 24, [Score=48.9, Expect=5e-08]; ENSG00000284468, SLC25A24, solute carrier family 25 member 24, [Score=48.9, Expect=5e-08]; ENSG00000114854, TNNC1, troponin C1, slow skeletal and cardiac type, [Score=48.1, Expect=6e-08]} {Mouse: ENSMUSG00000091898, Tnnc1, troponin C, cardiac/slow skeletal, [Score=48.5, Expect=3e-08]; ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [Score=46.2, Expect=4e-07]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [Score=47.0, Expect=1e-07]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [Score=45.4, Expect=3e-07]} {RNA1509_10992, RNA1509_2519, RNA1509_679} {RNA1310_66965, RNA1509_10992, RNA1509_2519, RNA1509_679} {RNA1509_10992, RNA1509_2519, RNA1509_679, RNA815_31569.1}
9. MligTC455_27122 1937 40.35 Mlig455_036943

Neo: -

Age: logFC(26M/2M)=-0.328

 2.618 - 0.787 - - 0.952 0.879 Mlig455_036943 {REF} {Length: 2654} {RNA1509_51779, RNA1509_58276} {RNA1310_29995.1, RNA1509_51779} {RNA1509_51779, RNA815_9865}
10. MligTC455_27348 14734 306.95 Mlig455_034670, Mlig455_034672

Neo: -

Age: Up-Down-Down

Region-enriched R8: 2.406/0.03361

 ANK1 2.565 - 0.911 - 0.702 0.952 -

Mlig455_034670 {REF} {Length: 12517} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=273.4]; Ankyrin repeat [PF00023.32, score=216.6]; Ankyrin repeats (many copies) [PF13637.8, score=210.5]; Ankyrin repeat [PF13606.8, score=179.8]; Ankyrin repeats (many copies) [PF13857.8, score=150.1]; Mab-21 protein [PF03281.16, score=22.4]; PEGA domain [PF08308.13, score=18.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=252, Expect=2e-68]; ENSG00000151150, ANK3, ankyrin 3, [Score=245, Expect=3e-66]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=246, Expect=1e-66]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=243, Expect=1e-65]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=234, Expect=4e-63]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=248, Expect=3e-67]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=229, Expect=2e-61]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=243, Expect=2e-67]} {RNA1509_25730} {RNA1310_2249.2} {RNA815_11470.1}

Mlig455_034672 {REF} {Length: 829} {RNA1509_40299, RNA1509_5063} {RNA1310_76724, RNA1509_40299} {RNA1509_40299, RNA815_2813.2}
11. MligTC455_27347 208457 4342.84 Mlig455_029731, Mlig455_029733, Mlig455_029734, Mlig455_034875, Mlig455_034878, Mlig455_034891

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.046

Region-enriched R8: 1.565/0.01423
Region-enriched R7: 1.401/0.02656

 2.496 0.729 0.956 - - 0.811 -

Mlig455_029731 {REF} {Length: 691} {RNA1509_25} {RNA1310_29531} {RNA815_10152.2}

Mlig455_029733 {REF} {Length: 585} {RNA1509_25} {RNA1310_29531} {RNA815_10152.2}

Mlig455_029734 {REF} {Length: 691} {RNA1509_25} {RNA1310_29531} {RNA815_10152.1}

Mlig455_034875 {REF} {Length: 807} {RNA1509_16846, RNA1509_30861} {RNA1310_51783, RNA1509_16846} {RNA1509_16846, RNA815_10152.1}

Mlig455_034878 {REF} {Length: 667} {RNA1509_30861} {RNA1310_51783} {RNA815_10152.1}

Mlig455_034891 {REF} {Length: 694} {RNA1509_1031, RNA1509_30861, RNA1509_3348, RNA1509_7571} {RNA1310_51783, RNA1509_1031, RNA1509_3348, RNA1509_7571} {RNA1509_1031, RNA1509_3348, RNA1509_7571, RNA815_10152.1}
12. MligTC455_30659 7438 154.97 Mlig455_008135, Mlig455_012766, Mlig455_021205, Mlig455_026385, Mlig455_035726, Mlig455_035727, Mlig455_067397, Mlig455_070688, Mlig455_070937

Neo: -

Age: Down-Up-Down

Region-enriched R8: 1.647/0.04332

 KMT5A 2.492 0.812 0.951 - - 0.729 -

Mlig455_008135 {REF} {Length: 3237} {RNA1509_2996} {RNA1310_18007} {RNA815_15022}

Mlig455_012766 {REF} {Length: 4660} {TRANSSPLICED} {RNA1509_2996} {RNA1310_18007} {RNA815_15022}

Mlig455_021205 {REF} {Length: 3235} {RNA1509_2996} {RNA1310_18007} {RNA815_15022}

Mlig455_026385 {REF} {Length: 2839} {TRANSSPLICED} {RNA1509_44078} {RNA1310_33930} {RNA815_15022}

Mlig455_035726 {REF} {Length: 1020} {Pfam: SET domain [PF00856.30, score=45.1]} {Human: ENSG00000183955, KMT5A, lysine methyltransferase 5A, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000049327, Kmt5a, lysine methyltransferase 5A, [Score=64.7, Expect=2e-11]} {Dmel: FBgn0011474, PR-Set7, PR/SET domain containing protein 7, [Score=76.6, Expect=3e-15]} {Celegans: WBGene00004781, set-1, Histone-lysine N-methyltransferase set-1, [Score=77.0, Expect=2e-16]} {Smed: dd_Smed_v6_5677_0_1, dd_Smed_v6_5677_0_1, [Score=78.2, Expect=2e-16]} {RNA1509_2996} {RNA1310_18007} {RNA815_15022}

Mlig455_035727 {REF} {Length: 2924} {TRANSSPLICED} {RNA1509_44078} {RNA1310_31019} {RNA815_15022}

Mlig455_067397 {REF} {Length: 2535} {RNA1509_2996} {RNA1310_18007} {RNA815_15022}

Mlig455_070688 {REF} {Length: 2537} {RNA1509_2996} {RNA1310_18007, RNA1509_2996} {RNA1509_2996, RNA815_15022}

Mlig455_070937 {REF} {Length: 2433} {RNA1509_2996, RNA1509_31638} {RNA1310_18007, RNA1509_31638} {RNA1509_31638, RNA815_15022}
13. MligTC455_54301 10407 216.81 Mlig455_061141

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.453

 1.832 - 0.867 - - 0.965 - Mlig455_061141 {REF} {Length: 896} {RNA1509_4003} {RNA1310_87474} {RNA815_2608.1}
14. MligTC455_46089 2032 42.33 Mlig455_042709

Neo: -

Age: logFC(26M/2M)=-0.465

 ARG1 1.828 - - - 0.877 - 0.951 Mlig455_042709 {REF} {Length: 1600} {Pfam: Arginase family [PF00491.23, score=223.6]} {Human: ENSG00000118520, ARG1, arginase 1, [RH, Score=286, Expect=2e-94]; ENSG00000081181, ARG2, arginase 2, [RH, Score=272, Expect=1e-88]} {Mouse: ENSMUSG00000019987, Arg1, arginase, liver, [RH, Score=277, Expect=3e-91]; ENSMUSG00000021125, Arg2, arginase type II, [RH, Score=267, Expect=1e-86]} {Dmel: FBgn0023535, arg, arginase, [RH, Score=222, Expect=2e-69]} {Celegans: WBGene00020658, T21F4.1, [RH, Score=97.1, Expect=2e-22]} {RNA1509_23735, RNA1509_6004} {RNA1310_18478, RNA1509_23735, RNA1509_6004} {RNA1509_23735, RNA1509_6004, RNA815_8847}
15. MligTC455_21218 254 5.29 Mlig455_039115

Neo: -

Age: logFC(26M/2M)=0.413

 1.82 - 0.958 - - - 0.862 Mlig455_039115 {REF} {Length: 3877} {RNA1509_42019} {RNA1310_12333.1, RNA1509_42019} {RNA1509_42019, RNA815_15134}
16. MligTC455_47240 268 5.59 Mlig455_010837, Mlig455_033215

Neo: -

Age: -

 PLSCR1 1.812 - 0.950 - - 0.862 -

Mlig455_010837 {REF} {Length: 1855} {Pfam: Scramblase [PF03803.17, score=233.3]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=199, Expect=6e-62]} {Mouse: ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [Score=201, Expect=2e-62]; ENSMUSG00000032372, Plscr2, phospholipid scramblase 2, [Score=195, Expect=2e-60]} {Dmel: FBgn0052056, scramb1, scramblase 1, [Score=206, Expect=5e-66]} {Celegans: WBGene00014200, scrm-2, Phospholipid scramblase, [Score=169, Expect=4e-51]} {Smed: dd_Smed_v6_6988_0_1, dd_Smed_v6_6988_0_1, [Score=254, Expect=9e-85]} {RNA1509_22398} {RNA1310_25370, RNA1509_22398} {RNA1509_22398, RNA815_17867}

Mlig455_033215 {REF} {Length: 1460} {Pfam: Scramblase [PF03803.17, score=233.5]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=199, Expect=4e-62]} {Mouse: ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [Score=200, Expect=1e-62]; ENSMUSG00000032372, Plscr2, phospholipid scramblase 2, [Score=194, Expect=1e-60]} {Dmel: FBgn0052056, scramb1, scramblase 1, [Score=206, Expect=2e-66]} {Celegans: WBGene00014200, scrm-2, Phospholipid scramblase, [Score=170, Expect=6e-52]} {Smed: dd_Smed_v6_6988_0_1, dd_Smed_v6_6988_0_1, [Score=253, Expect=2e-84]} {RNA1509_22398} {RNA1310_25370} {RNA815_17867}
17. MligTC455_47340 1613 33.6 Mlig455_067342

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.480

 1.773 0.812 0.961 - - - - Mlig455_067342 {REF} {Length: 1430} {RNA1509_11932} {RNA1310_46975.1, RNA1509_11932} {RNA1509_11932, RNA815_50642}
18. MligTC455_30656 531 11.06 Mlig455_000273

Neo: -

Age: -

Region-enriched R8: 2.263/0.01198

 1.759 0.805 0.954 - - - - Mlig455_000273 {REF} {Length: 356} {NoTransDecoderORF} {RNA1509_2996} {RNA1310_69787} {RNA815_15022}
19. MligTC455_47911 454 9.45 Mlig455_025174, Mlig455_025185, Mlig455_063945

Neo: -

Age: Down-Down-Up

Region-enriched R7: 1.848/0.00637

 INAFM2 1.735 - - - 0.781 - 0.954

Mlig455_025174 {REF} {Length: 1166} {Pfam: TRP-interacting helix [PF15018.8, score=59.1]; Voltage-dependent anion channel [PF03595.19, score=21.3]} {Human: ENSG00000259330, INAFM2, InaF motif containing 2, [RH, Score=72.4, Expect=4e-17]} {Mouse: ENSMUSG00000074918, Inafm2, InaF motif containing 2, [RH, Score=72.0, Expect=4e-17]} {Dmel: FBgn0260812, inaF-D, [RH, Score=51.6, Expect=6e-09]} {Celegans: WBGene00009325, F32D8.15, [RH, Score=48.5, Expect=2e-08]} {Smed: dd_Smed_v6_11468_0_1, dd_Smed_v6_11468_0_1, [RH, Score=66.6, Expect=6e-16]} {RNA1509_26679} {RNA1310_3928} {RNA815_30540}

Mlig455_025185 {REF} {Length: 1331} {Pfam: TRP-interacting helix [PF15018.8, score=59.1]; Voltage-dependent anion channel [PF03595.19, score=21.3]} {Human: ENSG00000259330, INAFM2, InaF motif containing 2, [RH, Score=72.4, Expect=4e-17]} {Mouse: ENSMUSG00000074918, Inafm2, InaF motif containing 2, [RH, Score=72.0, Expect=4e-17]} {Dmel: FBgn0260812, inaF-D, [RH, Score=51.6, Expect=6e-09]} {Celegans: WBGene00009325, F32D8.15, [RH, Score=48.5, Expect=2e-08]} {Smed: dd_Smed_v6_11468_0_1, dd_Smed_v6_11468_0_1, [RH, Score=66.6, Expect=6e-16]} {RNA1509_26679} {RNA1310_3928, RNA1509_26679} {RNA1509_26679, RNA815_30540}

Mlig455_063945 {REF} {Length: 1146} {Pfam: TRP-interacting helix [PF15018.8, score=59.1]; Voltage-dependent anion channel [PF03595.19, score=21.3]} {Human: ENSG00000259330, INAFM2, InaF motif containing 2, [RH, Score=72.4, Expect=4e-17]} {Mouse: ENSMUSG00000074918, Inafm2, InaF motif containing 2, [RH, Score=72.0, Expect=4e-17]} {Dmel: FBgn0260812, inaF-D, [RH, Score=51.6, Expect=6e-09]} {Celegans: WBGene00009325, F32D8.15, [RH, Score=48.5, Expect=2e-08]} {Smed: dd_Smed_v6_11468_0_1, dd_Smed_v6_11468_0_1, [RH, Score=66.6, Expect=6e-16]} {RNA1509_26679, RNA1509_58648} {RNA1310_3928, RNA1509_58648} {RNA1509_58648, RNA815_30540}
20. MligTC455_22453 308 6.42 Mlig455_002760, Mlig455_063360

Neo: -

Age: -

Region-enriched R7: 1.998/0.00091

 RHBDL2 1.726 - - - 0.771 - 0.955

Mlig455_002760 {REF} {Length: 340} {NoTransDecoderORF} {RNA1310_79323} {RNA815_51519}

Mlig455_063360 {REF} {Length: 4019} {Pfam: Rhomboid family [PF01694.24, score=76.7]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [Score=111, Expect=1e-26]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=117, Expect=8e-29]} {Dmel: FBgn0020248, stet, stem cell tumor, [Score=128, Expect=1e-31]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=96.3, Expect=2e-21]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [Score=207, Expect=4e-61]} {RNA1509_50956} {RNA1310_32207} {RNA815_21281}
21. MligTC455_20255 1359 28.31 Mlig455_040441

Neo: -

Age: -

Region-enriched R8: 2.080/0.00005

 1.721 - 0.958 - 0.763 - - Mlig455_040441 {REF} {Length: 441} {RNA1509_31276} {RNA1310_93944} {RNA815_51607}
22. MligTC455_29275 691 14.4 Mlig455_054471

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.416

 1.72 0.770 0.950 - - - - Mlig455_054471 {REF} {Length: 1554} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23118} {RNA1310_26014.1} {RNA815_13372}
23. MligTC455_30891 247 5.14 Mlig455_058058

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.432

Region-enriched R8: 3.070/0.02042

Regeneration-downregulated BL: -7.277

Regeneration-depleted BL: -7.277

 1.72 - 0.950 - - - 0.770 Mlig455_058058 {REF} {Length: 2979} {Pfam: Domain of unknown function (DUF3827) [PF12877.9, score=17.0]} {RNA1509_44795} {RNA1310_7166.1} {RNA815_1194.1}
24. MligTC455_31522 488 10.16 Mlig455_006598

Neo: -

Age: Down-Up-Down

 1.701 - - - - 0.743 0.958 Mlig455_006598 {REF} {Length: 8383} {RNA1509_25311} {RNA1310_2138} {RNA815_5558.1}
25. MligTC455_35153 6628 138.09 Mlig455_035972, Mlig455_047634

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.329

Region-enriched R8: 1.701/0.00319

 AF241726.2 1.676 0.718 0.958 - - - -

Mlig455_035972 {REF} {Length: 1946} {Pfam: Tetraspanin family [PF00335.22, score=107.2]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=59.3, Expect=1e-09]; ENSG00000130167, TSPAN16, tetraspanin 16, [Score=58.5, Expect=1e-09]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=58.5, Expect=2e-09]} {Mouse: ENSMUSG00000058254, Tspan7, tetraspanin 7, [Score=58.5, Expect=9e-10]; ENSMUSG00000025351, Cd63, CD63 antigen, [Score=58.2, Expect=1e-09]} {Dmel: FBgn0020372, TM4SF, Transmembrane 4 superfamily, [RH, Score=48.5, Expect=3e-06]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=70.1, Expect=5e-14]} {Smed: dd_Smed_v6_546_0_1, dd_Smed_v6_546_0_1, [RH, Score=72.0, Expect=8e-15]} {RNA1509_20707, RNA1509_2681, RNA1509_28721, RNA1509_29848, RNA1509_31530} {RNA1310_15134.2, RNA1509_20707, RNA1509_2681, RNA1509_28721, RNA1509_29848, RNA1509_31530} {RNA1509_20707, RNA1509_2681, RNA1509_28721, RNA1509_29848, RNA1509_31530, RNA815_5522.1}

Mlig455_047634 {REF} {Length: 1948} {Pfam: Tetraspanin family [PF00335.22, score=107.2]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=59.3, Expect=1e-09]; ENSG00000130167, TSPAN16, tetraspanin 16, [Score=58.5, Expect=1e-09]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=58.5, Expect=2e-09]} {Mouse: ENSMUSG00000058254, Tspan7, tetraspanin 7, [Score=58.5, Expect=9e-10]; ENSMUSG00000025351, Cd63, CD63 antigen, [Score=58.2, Expect=1e-09]} {Dmel: FBgn0020372, TM4SF, Transmembrane 4 superfamily, [RH, Score=48.5, Expect=3e-06]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=70.1, Expect=5e-14]} {Smed: dd_Smed_v6_546_0_1, dd_Smed_v6_546_0_1, [RH, Score=72.0, Expect=8e-15]} {RNA1509_2681} {RNA1310_15134.2} {RNA815_5522.1}
26. MligTC455_52544 250 5.21 Mlig455_030562

Neo: -

Age: Up-Down-Down

Region-enriched R8: 3.544/0.00108

 1.664 - - 0.707 - - 0.957 Mlig455_030562 {REF} {Length: 1251} {RNA1310_32103} {RNA815_22028}
27. MligTC455_33166 57 1.2 Mlig455_059521

Neo: -

Age: Down-Up-Down

 0.993 - - - - 0.993 - Mlig455_059521 {REF} {Length: 812} {NoTransDecoderORF} {RNA1509_31268} {RNA1310_8042.1} {RNA815_21467}
28. MligTC455_24966 21785 453.86 Mlig455_003712

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.885

Regeneration-downregulated BL: -1.066

Regeneration-depleted BL: -1.066

 EIF1AY 0.966 - - - - 0.966 - Mlig455_003712 {REF} {Length: 1962} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.21, score=83.0]} {Human: ENSG00000198692, EIF1AY, eukaryotic translation initiation factor 1A Y-linked, [RH, Score=204, Expect=2e-68]; ENSG00000173674, EIF1AX, eukaryotic translation initiation factor 1A X-linked, [RH, Score=204, Expect=2e-68]} {Mouse: ENSMUSG00000067194, Eif1ax, eukaryotic translation initiation factor 1A, X-linked, [RH, Score=204, Expect=1e-68]; ENSMUSG00000057561, Eif1a, eukaryotic translation initiation factor 1A, [RH, Score=203, Expect=7e-68]; ENSMUSG00000113201, Gm21936, predicted gene, 21936, [RH, Score=202, Expect=1e-67]; ENSMUSG00000093847, Gm5039, predicted gene 5039, [RH, Score=202, Expect=2e-67]; ENSMUSG00000113805, Gm5788, predicted pseudogene 5788, [RH, Score=202, Expect=1e-67]; ENSMUSG00000072905, Gm2016, predicted gene 2016, [RH, Score=201, Expect=4e-67]; ENSMUSG00000079029, Gm5662, predicted gene 5662, [RH, Score=200, Expect=7e-67]; ENSMUSG00000079034, Gm8300, predicted gene 8300, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095799, Gm8332, predicted pseudogene 8332, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095717, Gm2056, predicted gene 2056, [RH, Score=199, Expect=3e-66]; ENSMUSG00000096803, Gm6803, predicted gene 6803, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096049, Gm2075, predicted gene 2075, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096619, Gm2035, predicted pseudogene 2035, [RH, Score=195, Expect=1e-64]; ENSMUSG00000113971, Gm2022, predicted pseudogene 2022, [RH, Score=194, Expect=2e-64]} {Dmel: FBgn0026250, eIF1A, eukaryotic translation initiation factor 1A, [RH, Score=217, Expect=2e-73]} {Celegans: WBGene00019162, eif-1.A, Eukaryotic Initiation Factor, [RH, Score=189, Expect=7e-62]} {Smed: dd_Smed_v6_334_0_1, dd_Smed_v6_334_0_1, [RH, Score=225, Expect=2e-76]} {RNA1509_15613, RNA1509_270, RNA1509_8383} {RNA1310_31581, RNA1509_15613, RNA1509_270, RNA1509_8383} {RNA1509_15613, RNA1509_270, RNA1509_8383, RNA815_13282}
29. MligTC455_46248 1490 31.04 Mlig455_013803, Mlig455_070884

Neo: -

Age: Down-Up-Down

 HTR1A 0.963 - - - - 0.963 -

Mlig455_013803 {REF} {Length: 3026} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=266.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=46.3]} {Human: ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=224, Expect=3e-68]; ENSG00000135312, HTR1B, 5-hydroxytryptamine receptor 1B, [Score=222, Expect=1e-67]; ENSG00000179546, HTR1D, 5-hydroxytryptamine receptor 1D, [Score=221, Expect=1e-67]; ENSG00000179097, HTR1F, 5-hydroxytryptamine receptor 1F, [Score=217, Expect=4e-66]; ENSG00000148680, HTR7, 5-hydroxytryptamine receptor 7, [Score=216, Expect=5e-65]; ENSG00000169252, ADRB2, adrenoceptor beta 2, [Score=213, Expect=9e-64]} {Mouse: ENSMUSG00000021721, Htr1a, 5-hydroxytryptamine (serotonin) receptor 1A, [Score=228, Expect=1e-69]} {Dmel: FBgn0004573, 5-HT7, 5-hydroxytryptamine (serotonin) receptor 7, [RH, Score=280, Expect=2e-88]} {Celegans: WBGene00004780, ser-7, SERotonin/octopamine receptor family, [RH, Score=226, Expect=4e-69]} {Smed: dd_Smed_v6_16752_0_1, dd_Smed_v6_16752_0_1, [Score=373, Expect=8e-125]} {RNA1509_15786, RNA1509_53758} {RNA1310_6503, RNA1509_15786, RNA1509_53758} {RNA1509_15786, RNA1509_53758, RNA815_5855}

Mlig455_070884 {REF} {Length: 3086} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=266.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=46.3]} {Human: ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=224, Expect=4e-68]; ENSG00000135312, HTR1B, 5-hydroxytryptamine receptor 1B, [Score=222, Expect=1e-67]; ENSG00000179546, HTR1D, 5-hydroxytryptamine receptor 1D, [Score=221, Expect=1e-67]; ENSG00000179097, HTR1F, 5-hydroxytryptamine receptor 1F, [Score=217, Expect=5e-66]; ENSG00000148680, HTR7, 5-hydroxytryptamine receptor 7, [Score=216, Expect=5e-65]; ENSG00000169252, ADRB2, adrenoceptor beta 2, [Score=213, Expect=7e-64]} {Mouse: ENSMUSG00000021721, Htr1a, 5-hydroxytryptamine (serotonin) receptor 1A, [Score=228, Expect=1e-69]} {Dmel: FBgn0004573, 5-HT7, 5-hydroxytryptamine (serotonin) receptor 7, [RH, Score=280, Expect=2e-88]} {Celegans: WBGene00004780, ser-7, SERotonin/octopamine receptor family, [RH, Score=226, Expect=4e-69]} {Smed: dd_Smed_v6_16752_0_1, dd_Smed_v6_16752_0_1, [Score=373, Expect=9e-125]} {RNA1509_15786} {RNA1310_6503} {RNA815_5855}
30. MligTC455_30250 292 6.09 Mlig455_066355

Neo: -

Age: Up-Down-Down

 0.962 - - - - 0.962 - Mlig455_066355 {REF} {Length: 1695} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.2]} {RNA1509_33034} {RNA1310_614.1} {RNA815_33502.1}
31. MligTC455_18369 234 4.87 Mlig455_015695

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_015695 {REF} {Length: 1855} {TRANSSPLICED} {RNA1509_58191} {RNA1310_66702.1} {RNA815_46154}
32. MligTC455_30279 171 3.57 Mlig455_003682, Mlig455_026254, Mlig455_034156, Mlig455_071093

Neo: -

Age: -

 0.959 - - - - 0.959 -

Mlig455_003682 {REF} {Length: 1016} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.5]} {Celegans: WBGene00016348, C33E10.6, [Score=126, Expect=6e-32]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=117, Expect=4e-29]} {RNA1509_43415} {RNA1310_554.1} {RNA815_1342.1}

Mlig455_026254 {REF} {Length: 1016} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.5]} {Celegans: WBGene00016348, C33E10.6, [Score=124, Expect=2e-31]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=117, Expect=4e-29]} {RNA1509_43415} {RNA1310_554.1} {RNA815_1342.1}

Mlig455_034156 {REF} {Length: 1012} {Pfam: Recombination endonuclease VII [PF02945.17, score=33.1]; DNA polymerase type B, organellar and viral [PF03175.15, score=26.5]} {Celegans: WBGene00016348, C33E10.6, [Score=119, Expect=2e-30]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=107, Expect=1e-26]} {RNA1509_43415} {RNA1310_554.1, RNA1509_43415} {RNA1509_43415, RNA815_1342.1}

Mlig455_071093 {REF} {Length: 1019} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.0]} {Celegans: WBGene00016348, C33E10.6, [Score=66.2, Expect=3e-13]} {Smed: dd_Smed_v6_3574_2_45, dd_Smed_v6_3574_2_45, [Score=77.0, Expect=4e-19]} {RNA1509_43415} {RNA1310_554.1} {RNA815_1342.1}
33. MligTC455_28466 1457 30.34 Mlig455_013894, Mlig455_057717

Neo: -

Age: Down-Down-Up

 MMEL1, NSUN7 0.955 - 0.955 - - - -

Mlig455_013894 {REF} {Length: 2890} {Pfam: Peptidase family M13 [PF01431.23, score=134.0]; Peptidase family M13 [PF05649.15, score=42.2]} {Human: ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=138, Expect=1e-34]; ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=138, Expect=1e-34]; ENSG00000102174, PHEX, phosphate regulating endopeptidase homolog X-linked, [Score=135, Expect=1e-33]; ENSG00000196549, MME, membrane metalloendopeptidase, [Score=132, Expect=1e-32]} {Mouse: ENSMUSG00000058183, Mmel1, membrane metallo-endopeptidase-like 1, [Score=144, Expect=7e-37]} {Dmel: FBgn0038818, Nep4, Neprilysin 4, [Score=155, Expect=1e-40]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=142, Expect=2e-36]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=146, Expect=6e-38]} {RNA1509_9614} {RNA1310_6560, RNA1509_9614} {RNA1509_9614, RNA815_2393}

Mlig455_057717 {REF} {Length: 4904} {Pfam: Peptidase family M13 [PF01431.23, score=131.3]; Peptidase family M13 [PF05649.15, score=73.7]} {Human: ENSG00000179299, NSUN7, NOP2/Sun RNA methyltransferase family member 7, [RH, Score=197, Expect=7e-52]} {Mouse: ENSMUSG00000029206, Nsun7, NOL1/NOP2/Sun domain family, member 7, [RH, Score=201, Expect=3e-53]} {Dmel: FBgn0038818, Nep4, Neprilysin 4, [Score=158, Expect=8e-39]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=164, Expect=2e-41]} {Smed: dd_Smed_v6_30093_0_1, dd_Smed_v6_30093_0_1, [RH, Score=238, Expect=3e-68]} {RNA1509_9614} {RNA1310_6560} {RNA815_2393}
34. MligTC455_28989 92 1.92 Mlig455_016760

Neo: -

Age: Up-Down-Down

 0.955 - - - - - 0.955 Mlig455_016760 {REF} {Length: 2689} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59281} {RNA1310_51359} {RNA815_16150.1}
35. MligTC455_30998 353 7.36 Mlig455_041372, Mlig455_062743

Neo: -

Age: -

 0.955 - - - - - 0.955

Mlig455_041372 {REF} {Length: 239} {NoTransDecoderORF} {RNA1509_13580} {RNA1310_166} {RNA815_5586}

Mlig455_062743 {REF} {Length: 223} {NoTransDecoderORF} {RNA1509_13580} {RNA1310_166} {RNA815_5586}
36. MligTC455_26496 40627 846.39 Mlig455_012443, Mlig455_012445, Mlig455_012459

Neo: -

Age: -

Region-enriched R3: 1.261/0.00716

 0.952 - - - - 0.952 -

Mlig455_012443 {REF} {Length: 522} {TRANSSPLICED} {RNA1509_39210} {RNA1310_67854.1} {RNA815_3012.1}

Mlig455_012445 {REF} {Length: 522} {TRANSSPLICED} {RNA1509_39210} {RNA1310_67854.1} {RNA815_3012.1}

Mlig455_012459 {REF} {Length: 522} {TRANSSPLICED} {RNA1509_1204, RNA1509_16700, RNA1509_293, RNA1509_39210} {RNA1310_67854.1, RNA1509_1204, RNA1509_16700, RNA1509_293, RNA1509_39210} {RNA1509_1204, RNA1509_16700, RNA1509_293, RNA1509_39210, RNA815_3012.1}
37. MligTC455_37645 245 5.11 Mlig455_009094

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.736

 0.952 - - - - - 0.952 Mlig455_009094 {REF} {Length: 1970} {RNA1509_21906} {RNA1310_21443.1} {RNA815_8970.1}
38. MligTC455_26495 13521 281.68 Mlig455_012448

Neo: -

Age: Down-Down-Up

Region-enriched R3: 1.279/0.00682

 0.951 - - - - 0.951 - Mlig455_012448 {REF} {Length: 643} {TRANSSPLICED} {RNA1509_3044} {RNA1310_67854.1} {RNA815_3012.1}
39. MligTC455_26497 27028 563.09 Mlig455_012441, Mlig455_012460

Neo: -

Age: -

Region-enriched R3: 1.274/0.00647

 0.951 - - - - 0.951 -

Mlig455_012441 {REF} {Length: 645} {TRANSSPLICED} {RNA1509_3044} {RNA1310_67854.1} {RNA815_3012.1}

Mlig455_012460 {REF} {Length: 527} {TRANSSPLICED} {RNA1509_882} {RNA1310_67854.1} {RNA815_3012.1}
40. MligTC455_52401 60 1.24 Mlig455_048612

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_048612 {REF} {Length: 856} {RNA1310_39954.1} {RNA815_19596}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA