TomoSeq data search

Data search

Results for MligTC455_46295

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_46295	3907	81.39	Mlig455_061043	Neo: Int S/G2/M Age: -		Mlig455_061043 {REF} {Length: 1027} {TRANSSPLICED} {Pfam: Protein of Unknown function (DUF1690) [PF07956.13, score=19.6]} {Smed: dd_Smed_v6_4111_0_1, dd_Smed_v6_4111_0_1, [RH, Score=72.8, Expect=1e-16]} {RNA1509_19548, RNA1509_35470, RNA1509_3705, RNA1509_4323, RNA1509_50738} {RNA1310_33182.2, RNA1509_19548, RNA1509_35470, RNA1509_3705, RNA1509_4323, RNA1509_50738} {RNA1509_19548, RNA1509_35470, RNA1509_3705, RNA1509_4323, RNA1509_50738, RNA815_15670}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_46295

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.788	6.41	0.10926	0.68862
RegionR2	-0.366	6.41	0.30569	0.69630
RegionR3	-0.291	6.41	0.34252	0.87850
RegionR4	0.689	6.41	0.03197	0.14217
RegionR5	0.523	6.41	0.05818	0.20865
RegionR6	-0.061	6.41	0.83957	1.00000
RegionR7	-0.822	6.41	0.02320	0.28467
RegionR8	-0.459	6.41	0.24870	0.86771

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.753	6.41	0.23173	0.96191
RegenerationR2	-0.106	6.41	0.77386	0.98129
RegenerationR3	0.048	6.41	0.89987	1.00000
RegenerationR4	-0.184	6.41	0.62489	0.92200
RegenerationR5	-0.262	6.41	0.47068	0.84210
RegenerationR6	0.396	6.41	0.29362	0.64415
RegenerationBL	0.766	6.41	0.02685	0.18101
RegenerationTP	0.716	6.41	0.06935	0.42304

Genes with expression patterns similar to MligTC455_46295

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46295	3907	81.39	Mlig455_061043	Neo: Int S/G2/M Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_061043 {REF} {Length: 1027} {TRANSSPLICED} {Pfam: Protein of Unknown function (DUF1690) [PF07956.13, score=19.6]} {Smed: dd_Smed_v6_4111_0_1, dd_Smed_v6_4111_0_1, [RH, Score=72.8, Expect=1e-16]} {RNA1509_19548, RNA1509_35470, RNA1509_3705, RNA1509_4323, RNA1509_50738} {RNA1310_33182.2, RNA1509_19548, RNA1509_35470, RNA1509_3705, RNA1509_4323, RNA1509_50738} {RNA1509_19548, RNA1509_35470, RNA1509_3705, RNA1509_4323, RNA1509_50738, RNA815_15670}
2.	MligTC455_43872	1327	27.64	Mlig455_051371	Neo: - Age: -	RAB35	0.964	-	-	-	0.964	-	-	Mlig455_051371 {REF} {Length: 1911} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=192.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=117.9]; ADP-ribosylation factor family [PF00025.23, score=55.3]; 50S ribosome-binding GTPase [PF01926.25, score=26.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.2]; RsgA GTPase [PF03193.18, score=19.2]} {Human: ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [RH, Score=241, Expect=4e-81]} {Mouse: ENSMUSG00000029518, Rab35, RAB35, member RAS oncogene family, [RH, Score=241, Expect=3e-81]} {Dmel: FBgn0031090, Rab35, [RH, Score=234, Expect=9e-79]} {Celegans: WBGene00004284, rab-35, RAB family, [RH, Score=237, Expect=8e-80]} {Smed: dd_Smed_v6_854_0_5, dd_Smed_v6_854_0_5, [Score=214, Expect=3e-71]} {RNA1509_8433} {RNA1310_16945} {RNA815_1212.1}
3.	MligTC455_39898	738	15.38	Mlig455_030521	Neo: Irradiation Age: - Region-enriched R4: 2.375/0.00002	ZNF569	0.95	-	-	-	0.950	-	-	Mlig455_030521 {REF} {Length: 2607} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=113.0]; Zinc finger, C2H2 type [PF00096.28, score=73.4]; C2H2-type zinc finger [PF13894.8, score=62.0]; Zinc-finger of C2H2 type [PF12874.9, score=25.8]; C2H2-type zinc finger [PF13912.8, score=22.8]; zinc-finger of a C2HC-type [PF13913.8, score=22.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=21.9]} {Human: ENSG00000196437, ZNF569, zinc finger protein 569, [Score=167, Expect=2e-44]; ENSG00000278129, ZNF8, zinc finger protein 8, [Score=167, Expect=5e-45]; ENSG00000160961, ZNF333, zinc finger protein 333, [Score=166, Expect=4e-44]; ENSG00000171827, ZNF570, zinc finger protein 570, [Score=164, Expect=6e-44]; ENSG00000130182, ZSCAN10, zinc finger and SCAN domain containing 10, [Score=163, Expect=2e-43]; ENSG00000188321, ZNF559, zinc finger protein 559, [Score=162, Expect=3e-43]; ENSG00000175691, ZNF77, zinc finger protein 77, [Score=162, Expect=3e-43]; ENSG00000187801, ZFP69B, ZFP69 zinc finger protein B, [Score=162, Expect=1e-43]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=160, Expect=5e-43]; ENSG00000172006, ZNF554, zinc finger protein 554, [Score=160, Expect=8e-43]; ENSG00000189042, ZNF567, zinc finger protein 567, [Score=159, Expect=6e-42]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=159, Expect=1e-41]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=159, Expect=5e-41]; ENSG00000167384, ZNF180, zinc finger protein 180, [Score=159, Expect=9e-42]; ENSG00000268696, ZNF723, zinc finger protein 723, [Score=159, Expect=1e-42]; ENSG00000170100, ZNF778, zinc finger protein 778, [Score=159, Expect=1e-41]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=159, Expect=1e-41]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=159, Expect=5e-42]} {Mouse: ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=170, Expect=2e-45]; ENSMUSG00000066880, Zfp617, zinc finger protein 617, [Score=169, Expect=5e-46]; ENSMUSG00000059975, Zfp74, zinc finger protein 74, [Score=167, Expect=2e-44]; ENSMUSG00000032425, Zfp949, zinc finger protein 949, [Score=166, Expect=1e-44]; ENSMUSG00000064141, Zfp69, zinc finger protein 69, [Score=165, Expect=3e-44]; ENSMUSG00000060397, Zfp128, zinc finger protein 128, [Score=165, Expect=2e-44]; ENSMUSG00000031079, Zfp300, zinc finger protein 300, [Score=164, Expect=7e-44]; ENSMUSG00000068962, Zfp114, zinc finger protein 114, [Score=163, Expect=1e-43]; ENSMUSG00000022526, Zfp251, zinc finger protein 251, [Score=162, Expect=4e-43]; ENSMUSG00000060510, Zfp266, zinc finger protein 266, [Score=162, Expect=3e-43]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=162, Expect=2e-42]; ENSMUSG00000091474, 2610021A01Rik, RIKEN cDNA 2610021A01 gene, [Score=162, Expect=1e-42]} {Dmel: FBgn0038301, CG6654, [Score=159, Expect=3e-42]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=137, Expect=1e-37]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=141, Expect=4e-39]} {RNA1509_12331, RNA1509_18316, RNA1509_37936} {RNA1310_8262, RNA1509_12331, RNA1509_18316, RNA1509_37936} {RNA1509_12331, RNA1509_18316, RNA1509_37936, RNA815_4306.2}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_46295

3907

81.39

Mlig455_061043

Neo: Int S/G2/M

Age: -

1.000

MligTC455_43872

1327

27.64

Mlig455_051371

Neo: -

Age: -

RAB35

0.964

Mlig455_051371 {REF} {Length: 1911} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=192.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=117.9]; ADP-ribosylation factor family [PF00025.23, score=55.3]; 50S ribosome-binding GTPase [PF01926.25, score=26.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.2]; RsgA GTPase [PF03193.18, score=19.2]} {Human: ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [RH, Score=241, Expect=4e-81]} {Mouse: ENSMUSG00000029518, Rab35, RAB35, member RAS oncogene family, [RH, Score=241, Expect=3e-81]} {Dmel: FBgn0031090, Rab35, [RH, Score=234, Expect=9e-79]} {Celegans: WBGene00004284, rab-35, RAB family, [RH, Score=237, Expect=8e-80]} {Smed: dd_Smed_v6_854_0_5, dd_Smed_v6_854_0_5, [Score=214, Expect=3e-71]} {RNA1509_8433} {RNA1310_16945} {RNA815_1212.1}

MligTC455_39898

738

15.38

Mlig455_030521

Neo: Irradiation

Age: -

Region-enriched R4: 2.375/0.00002

ZNF569

0.95

0.950

Mlig455_030521 {REF} {Length: 2607} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=113.0]; Zinc finger, C2H2 type [PF00096.28, score=73.4]; C2H2-type zinc finger [PF13894.8, score=62.0]; Zinc-finger of C2H2 type [PF12874.9, score=25.8]; C2H2-type zinc finger [PF13912.8, score=22.8]; zinc-finger of a C2HC-type [PF13913.8, score=22.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=21.9]} {Human: ENSG00000196437, ZNF569, zinc finger protein 569, [Score=167, Expect=2e-44]; ENSG00000278129, ZNF8, zinc finger protein 8, [Score=167, Expect=5e-45]; ENSG00000160961, ZNF333, zinc finger protein 333, [Score=166, Expect=4e-44]; ENSG00000171827, ZNF570, zinc finger protein 570, [Score=164, Expect=6e-44]; ENSG00000130182, ZSCAN10, zinc finger and SCAN domain containing 10, [Score=163, Expect=2e-43]; ENSG00000188321, ZNF559, zinc finger protein 559, [Score=162, Expect=3e-43]; ENSG00000175691, ZNF77, zinc finger protein 77, [Score=162, Expect=3e-43]; ENSG00000187801, ZFP69B, ZFP69 zinc finger protein B, [Score=162, Expect=1e-43]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=160, Expect=5e-43]; ENSG00000172006, ZNF554, zinc finger protein 554, [Score=160, Expect=8e-43]; ENSG00000189042, ZNF567, zinc finger protein 567, [Score=159, Expect=6e-42]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=159, Expect=1e-41]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=159, Expect=5e-41]; ENSG00000167384, ZNF180, zinc finger protein 180, [Score=159, Expect=9e-42]; ENSG00000268696, ZNF723, zinc finger protein 723, [Score=159, Expect=1e-42]; ENSG00000170100, ZNF778, zinc finger protein 778, [Score=159, Expect=1e-41]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=159, Expect=1e-41]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=159, Expect=5e-42]} {Mouse: ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=170, Expect=2e-45]; ENSMUSG00000066880, Zfp617, zinc finger protein 617, [Score=169, Expect=5e-46]; ENSMUSG00000059975, Zfp74, zinc finger protein 74, [Score=167, Expect=2e-44]; ENSMUSG00000032425, Zfp949, zinc finger protein 949, [Score=166, Expect=1e-44]; ENSMUSG00000064141, Zfp69, zinc finger protein 69, [Score=165, Expect=3e-44]; ENSMUSG00000060397, Zfp128, zinc finger protein 128, [Score=165, Expect=2e-44]; ENSMUSG00000031079, Zfp300, zinc finger protein 300, [Score=164, Expect=7e-44]; ENSMUSG00000068962, Zfp114, zinc finger protein 114, [Score=163, Expect=1e-43]; ENSMUSG00000022526, Zfp251, zinc finger protein 251, [Score=162, Expect=4e-43]; ENSMUSG00000060510, Zfp266, zinc finger protein 266, [Score=162, Expect=3e-43]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=162, Expect=2e-42]; ENSMUSG00000091474, 2610021A01Rik, RIKEN cDNA 2610021A01 gene, [Score=162, Expect=1e-42]} {Dmel: FBgn0038301, CG6654, [Score=159, Expect=3e-42]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=137, Expect=1e-37]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=141, Expect=4e-39]} {RNA1509_12331, RNA1509_18316, RNA1509_37936} {RNA1310_8262, RNA1509_12331, RNA1509_18316, RNA1509_37936} {RNA1509_12331, RNA1509_18316, RNA1509_37936, RNA815_4306.2}