TomoSeq data search

Data search

Results for MligTC455_46349

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46349

1961

40.85

Mlig455_023120, Mlig455_023171

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.305

ELOF1

Mlig455_023120 {REF} {Length: 1060} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.0]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=102, Expect=2e-29]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=101, Expect=1e-29]} {Dmel: FBgn0063670, CG40228, [RH, Score=133, Expect=2e-42]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=134, Expect=6e-43]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9167} {RNA1310_32925, RNA1509_9167} {RNA1509_9167, RNA815_15186.1}

Mlig455_023171 {REF} {Length: 1056} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.0]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=102, Expect=2e-29]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=101, Expect=1e-29]} {Dmel: FBgn0063670, CG40228, [RH, Score=133, Expect=2e-42]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=134, Expect=6e-43]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9167} {RNA1310_32925} {RNA815_15186.1}

Cumulative graph for MligTC455_46349

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.197	5.445	0.11212	0.69418
RegionR2	0.263	5.445	0.46405	0.85080
RegionR3	0.203	5.445	0.49744	0.99361
RegionR4	0.08	5.445	0.82910	1.00000
RegionR5	-0.307	5.445	0.31650	0.65693
RegionR6	0.156	5.445	0.61193	1.00000
RegionR7	0.457	5.445	0.16920	0.75739
RegionR8	0.344	5.445	0.36990	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.796	5.445	0.52833	1.00000
RegenerationR2	0.002	5.445	0.99559	1.00000
RegenerationR3	-0.271	5.445	0.46763	0.84230
RegenerationR4	-0.203	5.445	0.60330	0.91470
RegenerationR5	-0.185	5.445	0.61723	0.91723
RegenerationR6	-0.964	5.445	0.01277	0.13938
RegenerationBL	-0.781	5.445	0.04147	0.23161
RegenerationTP	0.234	5.445	0.53436	0.92342

Genes with expression patterns similar to MligTC455_46349

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46349	1961	40.85	Mlig455_023120, Mlig455_023171	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.305	ELOF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023120 {REF} {Length: 1060} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.0]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=102, Expect=2e-29]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=101, Expect=1e-29]} {Dmel: FBgn0063670, CG40228, [RH, Score=133, Expect=2e-42]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=134, Expect=6e-43]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9167} {RNA1310_32925, RNA1509_9167} {RNA1509_9167, RNA815_15186.1} Mlig455_023171 {REF} {Length: 1056} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.0]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=102, Expect=2e-29]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=101, Expect=1e-29]} {Dmel: FBgn0063670, CG40228, [RH, Score=133, Expect=2e-42]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=134, Expect=6e-43]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9167} {RNA1310_32925} {RNA815_15186.1}
2.	MligTC455_44595	1521	31.68	Mlig455_044563	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.540	SOX14	4.721	0.785	0.746	0.784	0.705	0.954	0.747	Mlig455_044563 {REF} {Length: 2337} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=89.4]; HMG-box domain [PF09011.12, score=39.3]} {Human: ENSG00000168875, SOX14, SRY-box 14, [Score=108, Expect=2e-27]; ENSG00000125285, SOX21, SRY-box 21, [Score=108, Expect=4e-27]; ENSG00000181449, SOX2, SRY-box 2, [Score=108, Expect=5e-27]; ENSG00000182968, SOX1, SRY-box 1, [Score=107, Expect=6e-26]; ENSG00000005513, SOX8, SRY-box 8, [Score=106, Expect=2e-25]; ENSG00000134595, SOX3, SRY-box 3, [Score=106, Expect=2e-25]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=108, Expect=3e-27]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=108, Expect=2e-27]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=108, Expect=1e-27]; ENSMUSG00000024176, Sox8, SRY (sex determining region Y)-box 8, [Score=107, Expect=7e-26]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=107, Expect=4e-26]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=106, Expect=1e-25]; ENSMUSG00000041287, Sox15, SRY (sex determining region Y)-box 15, [Score=104, Expect=2e-26]} {Dmel: FBgn0000411, D, dachs, [Score=115, Expect=3e-29]} {Celegans: WBGene00015716, sox-4, SOX (Mammalian SRY box) family, [RH, Score=106, Expect=2e-27]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [Score=111, Expect=2e-27]} {RNA1509_30566, RNA1509_37296, RNA1509_44654} {RNA1310_8726.1, RNA1509_30566, RNA1509_37296, RNA1509_44654} {RNA1509_30566, RNA1509_37296, RNA1509_44654, RNA815_5231}
3.	MligTC455_17958	490	10.21	Mlig455_068231	Neo: - Age: logFC(26M/2M)=-0.406	CCDC83	2.531	-	-	-	0.755	0.955	0.821	Mlig455_068231 {REF} {Length: 2825} {Pfam: Domain of unknown function (DUF4618) [PF15397.8, score=19.3]} {Human: ENSG00000150676, CCDC83, coiled-coil domain containing 83, [RH, Score=145, Expect=2e-38]} {Mouse: ENSMUSG00000030617, Ccdc83, coiled-coil domain containing 83, [RH, Score=130, Expect=2e-33]} {Smed: dd_Smed_v6_16528_0_1, dd_Smed_v6_16528_0_1, [RH, Score=96.7, Expect=7e-22]} {RNA1509_34307, RNA1509_49481} {RNA1310_7992.1, RNA1509_34307, RNA1509_49481} {RNA1509_34307, RNA1509_49481, RNA815_3361.1}
4.	MligTC455_30749	730	15.2	Mlig455_027647, Mlig455_070947	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.459	TRPM7	1.79	-	-	-	-	0.964	0.826	Mlig455_027647 {REF} {Length: 5803} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.1]; Ankyrin repeats (many copies) [PF13637.8, score=48.0]; Ankyrin repeats (many copies) [PF13857.8, score=41.9]; Ion transport protein [PF00520.33, score=35.3]; Ankyrin repeat [PF13606.8, score=21.9]; Ankyrin repeat [PF00023.32, score=21.5]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=85.5, Expect=5e-16]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=87.0, Expect=1e-16]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=82.4, Expect=2e-15]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=67.0, Expect=8e-11]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=100, Expect=2e-21]} {RNA1509_11072} {RNA1310_3939.1} {RNA815_478} Mlig455_070947 {REF} {Length: 5801} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.0]; Ankyrin repeats (many copies) [PF13637.8, score=44.0]; Ankyrin repeats (many copies) [PF13857.8, score=43.3]; Ankyrin repeat [PF00023.32, score=19.6]} {RNA1509_11072} {RNA1310_3939.1, RNA1509_11072} {RNA1509_11072, RNA815_478}
5.	MligTC455_43343	2106	43.87	Mlig455_027410	Neo: - Age: - Regeneration-downregulated BL: -2.745 Regeneration-depleted BL: -2.745		1.781	-	-	-	0.957	-	0.824	Mlig455_027410 {REF} {Length: 1151} {RNA1509_13196} {RNA1310_57327, RNA1509_13196} {RNA1509_13196, RNA815_28247}
6.	MligTC455_37677	438	9.12	Mlig455_032872	Neo: - Age: -		0.989	-	-	-	-	0.989	-	Mlig455_032872 {REF} {Length: 906} {NoTransDecoderORF} {RNA1509_53375} {RNA1310_18706} {RNA815_8584.1}
7.	MligTC455_47284	1985	41.36	Mlig455_035332, Mlig455_035375	Neo: - Age: Down-Up-Up Region-enriched R2: 2.254/0.00001	PANK4	0.973	-	-	-	-	0.973	-	Mlig455_035332 {REF} {Length: 1878} {Pfam: Fumble [PF03630.16, score=120.1]} {Human: ENSG00000273494, PANK4, pantothenate kinase 4, [Score=106, Expect=2e-24]; ENSG00000157881, PANK4, pantothenate kinase 4, [Score=106, Expect=2e-24]} {Mouse: ENSMUSG00000029056, Pank4, pantothenate kinase 4, [Score=102, Expect=5e-23]} {Dmel: FBgn0011205, fbl, fumble, [Score=73.6, Expect=3e-14]} {Celegans: WBGene00004068, pnk-1, PaNtothenate Kinase, [Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [Score=152, Expect=9e-43]} {RNA1509_12908, RNA1509_25097, RNA1509_42106} {RNA1310_12126.1, RNA1509_12908, RNA1509_25097, RNA1509_42106} {RNA1509_12908, RNA1509_25097, RNA1509_42106, RNA815_8093.2} Mlig455_035375 {REF} {Length: 1877} {Pfam: Fumble [PF03630.16, score=118.3]} {Human: ENSG00000157881, PANK4, pantothenate kinase 4, [Score=101, Expect=1e-22]; ENSG00000273494, PANK4, pantothenate kinase 4, [Score=101, Expect=9e-23]} {Mouse: ENSMUSG00000029056, Pank4, pantothenate kinase 4, [Score=97.1, Expect=2e-21]} {Dmel: FBgn0011205, fbl, fumble, [Score=71.6, Expect=1e-13]} {Celegans: WBGene00004068, pnk-1, PaNtothenate Kinase, [Score=66.2, Expect=9e-12]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [Score=148, Expect=5e-41]} {RNA1509_12908} {RNA1310_12126.1} {RNA815_8093.2}
8.	MligTC455_15674	2877	59.94	Mlig455_064112	Neo: - Age: Down-Up-Down	LKAAEAR1	0.969	-	-	-	-	0.969	-	Mlig455_064112 {REF} {Length: 1020} {Pfam: Family of unknown function with LKAAEAR motif [PF15478.8, score=102.2]} {Human: ENSG00000171695, LKAAEAR1, LKAAEAR motif containing 1, [RH, Score=47.0, Expect=2e-06]} {Smed: dd_Smed_v6_8554_0_1, dd_Smed_v6_8554_0_1, [RH, Score=102, Expect=1e-28]} {RNA1509_12943, RNA1509_8205} {RNA1310_37956, RNA1509_12943, RNA1509_8205} {RNA1509_12943, RNA1509_8205, RNA815_16434.2}
9.	MligTC455_29341	77	1.61	Mlig455_071150	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_071150 {REF} {Length: 4059} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=46.6]} {RNA1509_21798} {RNA1310_8067.1} {RNA815_827}
10.	MligTC455_22074	240	4.99	Mlig455_023121	Neo: - Age: -	SIAH2	0.968	-	-	-	-	0.968	-	Mlig455_023121 {REF} {Length: 4938} {TRANSSPLICED} {Pfam: Seven in absentia protein family [PF03145.18, score=258.3]} {Human: ENSG00000181788, SIAH2, siah E3 ubiquitin protein ligase 2, [RH, Score=409, Expect=1e-142]} {Mouse: ENSMUSG00000040749, Siah1b, siah E3 ubiquitin protein ligase 1B, [RH, Score=419, Expect=4e-147]; ENSMUSG00000036432, Siah2, siah E3 ubiquitin protein ligase 2, [RH, Score=410, Expect=6e-143]} {Dmel: FBgn0003410, sina, seven in absentia, [RH, Score=400, Expect=3e-139]} {Celegans: WBGene00021369, siah-1, E3 ubiquitin-protein ligase siah-1, [RH, Score=383, Expect=2e-131]} {Smed: dd_Smed_v6_6226_0_1, dd_Smed_v6_6226_0_1, [RH, Score=438, Expect=2e-153]} {RNA1509_19105} {RNA1310_12118} {RNA815_7413.1}
11.	MligTC455_38595	3288	68.49	Mlig455_010873	Neo: - Age: Down-Up-Up		0.968	-	-	-	-	0.968	-	Mlig455_010873 {REF} {Length: 1973} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=19.0]} {RNA1509_19874, RNA1509_50086} {RNA1310_24247.2, RNA1509_19874, RNA1509_50086} {RNA1509_19874, RNA1509_50086, RNA815_10484}
12.	MligTC455_39941	9459	197.06	Mlig455_063449, Mlig455_063484	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.626		0.958	-	-	-	-	0.958	-	Mlig455_063449 {REF} {Length: 721} {RNA1509_60047} {RNA1310_34704} {RNA815_21539.1} Mlig455_063484 {REF} {Length: 862} {RNA1509_60047} {RNA1310_34704} {RNA815_21539.1}
13.	MligTC455_39945	646	13.45	Mlig455_021829	Neo: - Age: Down-Up-Down	CEP89	0.957	-	-	-	-	0.957	-	Mlig455_021829 {REF} {Length: 4593} {Human: ENSG00000121289, CEP89, centrosomal protein 89, [Score=99.8, Expect=3e-21]} {Mouse: ENSMUSG00000023072, Cep89, centrosomal protein 89, [RH, Score=105, Expect=4e-23]} {Smed: dd_Smed_v6_13073_0_3, dd_Smed_v6_13073_0_3, [Score=68.6, Expect=6e-12]} {RNA1509_11946} {RNA1310_7293.1, RNA1509_11946} {RNA1509_11946, RNA815_3039.1}
14.	MligTC455_15692	65	1.36	Mlig455_007333	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_007333 {REF} {Length: 1301} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=48.2]} {Smed: dd_Smed_v6_13661_0_2, dd_Smed_v6_13661_0_2, [Score=199, Expect=8e-63]} {RNA1509_40799} {RNA1310_41666} {RNA815_13749}
15.	MligTC455_28299	2270	47.29	Mlig455_059761	Neo: - Age: logFC(26M/2M)=0.708		0.953	-	-	-	-	0.953	-	Mlig455_059761 {REF} {Length: 1040} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9050} {RNA1310_21372.2, RNA1509_9050} {RNA1509_9050, RNA815_15381}
16.	MligTC455_28145	71	1.48	Mlig455_024749	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_024749 {REF} {Length: 1469} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}

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