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Results for MligTC455_28299

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28299 2270 47.29 Mlig455_059761

Neo: -

Age: logFC(26M/2M)=0.708

 Mlig455_059761 {REF} {Length: 1040} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9050} {RNA1310_21372.2, RNA1509_9050} {RNA1509_9050, RNA815_15381}

Cumulative graph for MligTC455_28299

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.382 5.722 0.06485 0.57731
RegionR2 0.194 5.722 0.60851 0.95661
RegionR3 0.513 5.722 0.09598 0.54414
RegionR4 0.629 5.722 0.08906 0.28441
RegionR5 -0.051 5.722 0.87257 1.00000
RegionR6 0.301 5.722 0.34868 0.93420
RegionR7 0.077 5.722 0.82632 1.00000
RegionR8 -0.282 5.722 0.49726 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.185 5.722 0.36903 1.00000
RegenerationR2 -0.003 5.722 0.99441 1.00000
RegenerationR3 -0.627 5.722 0.10818 0.51941
RegenerationR4 -0.422 5.722 0.29367 0.73702
RegenerationR5 0.311 5.722 0.42268 0.81303
RegenerationR6 -0.452 5.722 0.25281 0.60268
RegenerationBL -0.288 5.722 0.45942 0.82681
RegenerationTP 0.499 5.722 0.21421 0.65711


Genes with expression patterns similar to MligTC455_28299

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28299 2270 47.29 Mlig455_059761

Neo: -

Age: logFC(26M/2M)=0.708

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_059761 {REF} {Length: 1040} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9050} {RNA1310_21372.2, RNA1509_9050} {RNA1509_9050, RNA815_15381}
2. MligTC455_28292 1893 39.43 Mlig455_018004

Neo: -

Age: Down-Up-Down

 4.767 0.994 0.872 0.934 0.990 0.977 - Mlig455_018004 {REF} {Length: 1040} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9050} {RNA1310_21372.2} {RNA815_15381}
3. MligTC455_30237 2781 57.93 Mlig455_017256, Mlig455_023054, Mlig455_048450

Neo: -

Age: Up-Down-Down

 4.649 0.978 0.862 - 0.947 0.920 0.942

Mlig455_017256 {REF} {Length: 107} {NoTransDecoderORF}

Mlig455_023054 {REF} {Length: 914} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_10847.1} {RNA815_5428.3}

Mlig455_048450 {REF} {Length: 3910} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_14467} {RNA815_5428.1}
4. MligTC455_28298 2452 51.09 Mlig455_027052, Mlig455_033234

Neo: -

Age: -

 4.549 0.998 0.856 0.927 0.998 - 0.770

Mlig455_027052 {REF} {Length: 1606} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_10847.1} {RNA815_5428.1}

Mlig455_033234 {REF} {Length: 3912} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13847, RNA1509_36354} {RNA1310_14467, RNA1509_36354} {RNA1509_36354, RNA815_5428.1}
5. MligTC455_43049 1806 37.62 Mlig455_062571

Neo: -

Age: -

 ACAN 1.865 - - - 0.988 0.877 - Mlig455_062571 {REF} {Length: 5543} {TRANSSPLICED} {Human: ENSG00000157766, ACAN, aggrecan, [RH, Score=120, Expect=2e-26]} {Mouse: ENSMUSG00000030607, Acan, aggrecan, [Score=58.2, Expect=9e-08]} {Celegans: WBGene00013762, Y113G7B.12, [Score=57.0, Expect=1e-07]} {RNA1509_5653} {RNA1310_12100} {RNA815_6156.1}
6. MligTC455_26314 5157 107.45 Mlig455_030231

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.467

 SQSTM1 1.664 - - - 0.958 0.706 - Mlig455_030231 {REF} {Length: 2335} {Pfam: UBA domain [PF16577.7, score=51.0]; Zinc finger, ZZ type [PF00569.19, score=38.4]; PB1 domain [PF00564.26, score=22.7]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [Score=65.5, Expect=6e-11]; ENSG00000284099, AC008393.2, sequestosome 1, [Score=64.7, Expect=9e-11]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [Score=103, Expect=1e-23]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [Score=49.3, Expect=5e-06]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=55.5, Expect=5e-08]} {RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911} {RNA1310_32633, RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911} {RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911, RNA815_1033}
7. MligTC455_39244 1967 40.98 Mlig455_023527, Mlig455_023567, Mlig455_023632

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 1.418/0.00034

 APPL1 0.96 - - - - 0.960 -

Mlig455_023527 {REF} {Length: 4906} {Pfam: BAR domain of APPL family [PF16746.7, score=134.7]; Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=52.9]; PH domain [PF00169.31, score=26.9]; Phosphotyrosine-binding domain [PF08416.15, score=20.3]} {Human: ENSG00000157500, APPL1, adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, [RH, Score=376, Expect=2e-120]} {Mouse: ENSMUSG00000040760, Appl1, adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, [RH, Score=376, Expect=2e-120]} {RNA1509_19801} {RNA1310_7269} {RNA815_2381.1}

Mlig455_023567 {REF} {Length: 5616} {Pfam: BAR domain of APPL family [PF16746.7, score=134.7]; Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=52.9]; PH domain [PF00169.31, score=26.9]; Phosphotyrosine-binding domain [PF08416.15, score=20.3]} {Human: ENSG00000157500, APPL1, adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, [RH, Score=376, Expect=2e-120]} {Mouse: ENSMUSG00000040760, Appl1, adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, [RH, Score=376, Expect=2e-120]} {RNA1509_19801, RNA1509_7154} {RNA1310_7269, RNA1509_7154} {RNA1509_7154, RNA815_2381.1}

Mlig455_023632 {REF} {Length: 4416} {Pfam: BAR domain of APPL family [PF16746.7, score=134.7]; Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=53.7]; PH domain [PF00169.31, score=26.9]; Phosphotyrosine-binding domain [PF08416.15, score=19.9]} {Human: ENSG00000157500, APPL1, adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, [RH, Score=376, Expect=3e-120]} {Mouse: ENSMUSG00000040760, Appl1, adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, [RH, Score=375, Expect=2e-120]} {RNA1509_19801} {RNA1310_7269} {RNA815_2381.1}
8. MligTC455_28146 72 1.51 Mlig455_006794

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_006794 {REF} {Length: 1903} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
9. MligTC455_46349 1961 40.85 Mlig455_023120, Mlig455_023171

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.305

 ELOF1 0.953 - - - - 0.953 -

Mlig455_023120 {REF} {Length: 1060} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.0]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=102, Expect=2e-29]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=101, Expect=1e-29]} {Dmel: FBgn0063670, CG40228, [RH, Score=133, Expect=2e-42]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=134, Expect=6e-43]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9167} {RNA1310_32925, RNA1509_9167} {RNA1509_9167, RNA815_15186.1}

Mlig455_023171 {REF} {Length: 1056} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.0]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=102, Expect=2e-29]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=101, Expect=1e-29]} {Dmel: FBgn0063670, CG40228, [RH, Score=133, Expect=2e-42]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=134, Expect=6e-43]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9167} {RNA1310_32925} {RNA815_15186.1}
10. MligTC455_26315 6236 129.91 Mlig455_068010

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.365

 SQSTM1 0.952 - - - 0.952 - - Mlig455_068010 {REF} {Length: 5406} {Pfam: UBA domain [PF16577.7, score=51.0]; Zinc finger, ZZ type [PF00569.19, score=38.4]; PB1 domain [PF00564.26, score=22.7]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [Score=65.5, Expect=6e-11]; ENSG00000284099, AC008393.2, sequestosome 1, [Score=64.7, Expect=9e-11]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [RH, Score=102, Expect=1e-23]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [Score=49.3, Expect=5e-06]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=55.5, Expect=5e-08]} {RNA1509_911} {RNA1310_32633} {RNA815_1033}
11. MligTC455_28133 78 1.62 Mlig455_047994

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_047994 {REF} {Length: 1743} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_15620} {RNA815_11419.1}

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