Data search
Results for MligTC455_46572
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46572 | 405 | 8.44 | Mlig455_013456 | Neo: - Age: - |
NEK11 | Mlig455_013456 {REF} {Length: 3181} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=200.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=152.7]} {Human: ENSG00000114670, NEK11, NIMA related kinase 11, [RH, Score=340, Expect=4e-109]} {Mouse: ENSMUSG00000035032, Nek11, NIMA (never in mitosis gene a)-related expressed kinase 11, [RH, Score=331, Expect=6e-104]} {Dmel: FBgn0045980, niki, nimA-like kinase, [Score=166, Expect=7e-43]} {Celegans: WBGene00021461, nekl-1, NEK (NEver in mitosis Kinase) Like, [Score=184, Expect=9e-49]} {Smed: dd_Smed_v6_9098_0_1, dd_Smed_v6_9098_0_1, [RH, Score=338, Expect=1e-107]} {RNA1509_18086, RNA1509_51058} {RNA1310_9923.1, RNA1509_18086, RNA1509_51058} {RNA1509_18086, RNA1509_51058, RNA815_8184} |
Cumulative graph for MligTC455_46572
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.225 | 3.361 | 0.28196 | 0.93263 | |
| RegionR2 | 1.077 | 3.361 | 0.02225 | 0.16444 | |
| RegionR3 | 0.107 | 3.361 | 0.78428 | 1.00000 | |
| RegionR4 | 0.221 | 3.361 | 0.63221 | 0.94049 | |
| RegionR5 | -0.306 | 3.361 | 0.47993 | 0.84333 | |
| RegionR6 | -0.232 | 3.361 | 0.63535 | 1.00000 | |
| RegionR7 | -2.964 | 3.361 | 0.00290 | 0.07499 | |
| RegionR8 | 0.872 | 3.361 | 0.23054 | 0.84346 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.604 | 3.361 | 0.67146 | 1.00000 | |
| RegenerationR2 | -0.435 | 3.361 | 0.19637 | 0.64106 | |
| RegenerationR3 | -0.23 | 3.361 | 0.59555 | 0.90613 | |
| RegenerationR4 | -0.583 | 3.361 | 0.17797 | 0.61773 | |
| RegenerationR5 | -0.481 | 3.361 | 0.26032 | 0.69206 | |
| RegenerationR6 | -0.106 | 3.361 | 0.82559 | 0.98913 | |
| RegenerationBL | 1.05 | 3.361 | 0.11147 | 0.39434 | |
| RegenerationTP | 1.613 | 3.361 | 0.03289 | 0.30338 |
Genes with expression patterns similar to MligTC455_46572
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46572 | 405 | 8.44 | Mlig455_013456 | Neo: - Age: - |
NEK11 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013456 {REF} {Length: 3181} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=200.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=152.7]} {Human: ENSG00000114670, NEK11, NIMA related kinase 11, [RH, Score=340, Expect=4e-109]} {Mouse: ENSMUSG00000035032, Nek11, NIMA (never in mitosis gene a)-related expressed kinase 11, [RH, Score=331, Expect=6e-104]} {Dmel: FBgn0045980, niki, nimA-like kinase, [Score=166, Expect=7e-43]} {Celegans: WBGene00021461, nekl-1, NEK (NEver in mitosis Kinase) Like, [Score=184, Expect=9e-49]} {Smed: dd_Smed_v6_9098_0_1, dd_Smed_v6_9098_0_1, [RH, Score=338, Expect=1e-107]} {RNA1509_18086, RNA1509_51058} {RNA1310_9923.1, RNA1509_18086, RNA1509_51058} {RNA1509_18086, RNA1509_51058, RNA815_8184} |
| 2. | MligTC455_52239 | 629 | 13.1 | Mlig455_029233 | Neo: - Age: logFC(26M/2M)=-0.429 |
ABCG2 | 1.816 | - | - | 0.968 | - | - | 0.848 | Mlig455_029233 {REF} {Length: 3918} {Pfam: ABC-2 type transporter [PF01061.26, score=125.2]; ABC transporter [PF00005.29, score=73.3]; ABC-2 type transporter [PF19055.2, score=43.6]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=31.5]; RecF/RecN/SMC N terminal domain [PF02463.21, score=23.9]; AAA domain [PF13476.8, score=20.9]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=541, Expect=0.0]} {Mouse: ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=546, Expect=0.0]} {Dmel: FBgn0003996, w, white, [Score=257, Expect=4e-74]} {Celegans: WBGene00012925, wht-8, WHiTe (Drosophila) related ABC transporter, [RH, Score=259, Expect=1e-75]} {Smed: dd_Smed_v6_4225_0_2, dd_Smed_v6_4225_0_2, [RH, Score=689, Expect=0.0]} {RNA1509_2851} {RNA1310_949.2} {RNA815_1895} |
| 3. | MligTC455_36730 | 165 | 3.44 | Mlig455_056961 | Neo: - Age: Up-Down-Down |
1.718 | - | - | 0.973 | - | - | 0.745 | Mlig455_056961 {REF} {Length: 4865} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=57.3]} {RNA1310_49374} {RNA815_39552} | |
| 4. | MligTC455_46083 | 2220 | 46.24 | Mlig455_043359 | Neo: - |
MVP | 1.717 | - | - | 0.951 | - | - | 0.766 | Mlig455_043359 {REF} {Length: 3456} {Pfam: Major Vault Protein repeat domain [PF01505.20, score=217.8]; Shoulder domain [PF11978.10, score=163.9]; Major Vault Protein repeat domain [PF17794.3, score=121.1]; Major Vault Protein Repeat domain [PF17795.3, score=115.1]; Major Vault Protein repeat domain [PF17796.3, score=102.0]} {Human: ENSG00000013364, MVP, major vault protein, [RH, Score=1073, Expect=0.0]} {Mouse: ENSMUSG00000030681, Mvp, major vault protein, [RH, Score=1069, Expect=0.0]} {Smed: dd_Smed_v6_1098_0_1, dd_Smed_v6_1098_0_1, [Score=1073, Expect=0.0]} {RNA1509_27998, RNA1509_28665, RNA1509_40420} {RNA1310_3408.1, RNA1509_27998, RNA1509_40420} {RNA1509_27998, RNA1509_40420, RNA815_968.1} |
| 5. | MligTC455_23642 | 573 | 11.93 | Mlig455_069008 | Neo: - Age: logFC(26M/2M)=0.738 |
ACTB | 0.96 | - | - | 0.960 | - | - | - | Mlig455_069008 {REF} {Length: 2243} {Pfam: Actin [PF00022.21, score=267.5]; Protein kinase domain [PF00069.27, score=203.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=134.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.5]} {Human: ENSG00000075624, ACTB, actin beta, [Score=417, Expect=3e-141]; ENSG00000184009, ACTG1, actin gamma 1, [Score=417, Expect=5e-141]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=404, Expect=4e-136]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=404, Expect=5e-136]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=403, Expect=2e-135]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=401, Expect=9e-135]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=400, Expect=1e-134]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=417, Expect=4e-141]; ENSMUSG00000029580, Actb, actin, beta, [Score=417, Expect=2e-141]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=404, Expect=2e-136]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=404, Expect=4e-136]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=404, Expect=5e-136]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=403, Expect=1e-135]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=400, Expect=8e-135]} {Dmel: FBgn0000042, Act5C, Actin 5C, [Score=417, Expect=3e-141]} {Celegans: WBGene00000064, act-2, Actin-2, [Score=418, Expect=6e-142]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=419, Expect=4e-142]} {RNA1509_28185} {RNA1310_11665} {RNA815_6928} |
| 6. | MligTC455_40896 | 778 | 16.21 | Mlig455_062137 | Neo: - Age: logFC(26M/2M)=0.209 |
FOXN3 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_062137 {REF} {Length: 6212} {TRANSSPLICED} {Pfam: Forkhead domain [PF00250.20, score=106.3]} {Human: ENSG00000053254, FOXN3, forkhead box N3, [RH, Score=144, Expect=6e-36]} {Mouse: ENSMUSG00000034998, Foxn2, forkhead box N2, [RH, Score=136, Expect=8e-34]} {Dmel: FBgn0029504, CHES-1-like, Checkpoint suppressor 1-like, [RH, Score=138, Expect=7e-33]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=90.1, Expect=1e-19]} {Smed: dd_Smed_v6_4078_0_10, dd_Smed_v6_4078_0_10, [RH, Score=97.1, Expect=1e-20]} {RNA1509_26231} {RNA1310_10518, RNA1509_26231} {RNA1509_26231, RNA815_11878} |
| 7. | MligTC455_45440 | 890 | 18.54 | Mlig455_001967, Mlig455_002069 | Neo: - Age: Down-Up-Down Region-enriched R2: 3.352/0.00000 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_001967 {REF} {Length: 1676} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=70.0]} {Smed: dd_Smed_v6_5359_0_1, dd_Smed_v6_5359_0_1, [Score=94.0, Expect=2e-21]} {RNA1509_22810, RNA1509_34457, RNA1509_38886, RNA1509_41787, RNA1509_55399} {RNA1310_19554.1, RNA1509_22810, RNA1509_34457, RNA1509_38886, RNA1509_41787, RNA1509_55399} {RNA1509_22810, RNA1509_34457, RNA1509_38886, RNA1509_41787, RNA1509_55399, RNA815_11769} Mlig455_002069 {REF} {Length: 1675} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=69.5]} {Smed: dd_Smed_v6_5359_0_2, dd_Smed_v6_5359_0_2, [Score=93.6, Expect=4e-21]} {RNA1509_41787} {RNA1310_19554.1} {RNA815_11769} |
Berezikov Lab - 2020-2021 © ERIBA