Data search


search
Exact
Search

Results for MligTC455_46591

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46591 4307 89.73 Mlig455_009220, Mlig455_037089

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.301

UBE2I

Mlig455_009220 {REF} {Length: 1080} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=149.4]} {Human: ENSG00000103275, UBE2I, ubiquitin conjugating enzyme E2 I, [RH, Score=262, Expect=1e-90]} {Mouse: ENSMUSG00000015120, Ube2i, ubiquitin-conjugating enzyme E2I, [RH, Score=262, Expect=7e-91]} {Dmel: FBgn0010602, lwr, lesswright, [RH, Score=263, Expect=1e-91]} {Celegans: WBGene00006706, ubc-9, SUMO-conjugating enzyme UBC9, [RH, Score=251, Expect=1e-86]} {Smed: dd_Smed_v6_1535_0_1, dd_Smed_v6_1535_0_1, [RH, Score=272, Expect=3e-95]} {RNA1509_15989} {RNA1310_29502.3} {RNA815_13716.1}

Mlig455_037089 {REF} {Length: 1124} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=149.4]} {Human: ENSG00000103275, UBE2I, ubiquitin conjugating enzyme E2 I, [RH, Score=262, Expect=1e-90]} {Mouse: ENSMUSG00000015120, Ube2i, ubiquitin-conjugating enzyme E2I, [RH, Score=262, Expect=7e-91]} {Dmel: FBgn0010602, lwr, lesswright, [RH, Score=263, Expect=1e-91]} {Celegans: WBGene00006706, ubc-9, SUMO-conjugating enzyme UBC9, [RH, Score=251, Expect=1e-86]} {Smed: dd_Smed_v6_1535_0_1, dd_Smed_v6_1535_0_1, [RH, Score=272, Expect=3e-95]} {RNA1509_15989, RNA1509_20179, RNA1509_32559, RNA1509_59307, RNA1509_6541} {RNA1310_29502.3, RNA1509_15989, RNA1509_20179, RNA1509_32559, RNA1509_59307, RNA1509_6541} {RNA1509_15989, RNA1509_20179, RNA1509_32559, RNA1509_59307, RNA1509_6541, RNA815_13716.1}

Cumulative graph for MligTC455_46591

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.984 6.666 0.05335 0.54068
RegionR2 -0.567 6.666 0.01694 0.13832
RegionR3 0.352 6.666 0.06280 0.44321
RegionR4 0.88 6.666 0.00010 0.00153
RegionR5 0.792 6.666 0.00001 0.00018
RegionR6 0.255 6.666 0.19092 0.75769
RegionR7 -0.289 6.666 0.22557 0.84647
RegionR8 -0.439 6.666 0.13098 0.66294

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -9.238 6.666 0.00037 0.10687
RegenerationR2 -0.199 6.666 0.36109 0.78982
RegenerationR3 -0.614 6.666 0.00620 0.14232
RegenerationR4 -0.305 6.666 0.18859 0.63222
RegenerationR5 -0.216 6.666 0.30892 0.73509
RegenerationR6 0.027 6.666 0.90490 1.00000
RegenerationBL 0.302 6.666 0.19350 0.52912
RegenerationTP 0.167 6.666 0.52835 0.91916


Genes with expression patterns similar to MligTC455_46591

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46591 4307 89.73 Mlig455_009220, Mlig455_037089

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.301

UBE2I 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_009220 {REF} {Length: 1080} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=149.4]} {Human: ENSG00000103275, UBE2I, ubiquitin conjugating enzyme E2 I, [RH, Score=262, Expect=1e-90]} {Mouse: ENSMUSG00000015120, Ube2i, ubiquitin-conjugating enzyme E2I, [RH, Score=262, Expect=7e-91]} {Dmel: FBgn0010602, lwr, lesswright, [RH, Score=263, Expect=1e-91]} {Celegans: WBGene00006706, ubc-9, SUMO-conjugating enzyme UBC9, [RH, Score=251, Expect=1e-86]} {Smed: dd_Smed_v6_1535_0_1, dd_Smed_v6_1535_0_1, [RH, Score=272, Expect=3e-95]} {RNA1509_15989} {RNA1310_29502.3} {RNA815_13716.1}

Mlig455_037089 {REF} {Length: 1124} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=149.4]} {Human: ENSG00000103275, UBE2I, ubiquitin conjugating enzyme E2 I, [RH, Score=262, Expect=1e-90]} {Mouse: ENSMUSG00000015120, Ube2i, ubiquitin-conjugating enzyme E2I, [RH, Score=262, Expect=7e-91]} {Dmel: FBgn0010602, lwr, lesswright, [RH, Score=263, Expect=1e-91]} {Celegans: WBGene00006706, ubc-9, SUMO-conjugating enzyme UBC9, [RH, Score=251, Expect=1e-86]} {Smed: dd_Smed_v6_1535_0_1, dd_Smed_v6_1535_0_1, [RH, Score=272, Expect=3e-95]} {RNA1509_15989, RNA1509_20179, RNA1509_32559, RNA1509_59307, RNA1509_6541} {RNA1310_29502.3, RNA1509_15989, RNA1509_20179, RNA1509_32559, RNA1509_59307, RNA1509_6541} {RNA1509_15989, RNA1509_20179, RNA1509_32559, RNA1509_59307, RNA1509_6541, RNA815_13716.1}
2. MligTC455_20087 2137 44.52 Mlig455_053573, Mlig455_065367

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.481/0.00004

MEAF6 1.869 - - - 0.901 - 0.968

Mlig455_053573 {REF} {Length: 844} {TRANSSPLICED} {Pfam: Histone acetyltransferase subunit NuA4 [PF09340.12, score=94.6]} {Human: ENSG00000163875, MEAF6, MYST/Esa1 associated factor 6, [RH, Score=135, Expect=2e-40]} {Mouse: ENSMUSG00000028863, Meaf6, MYST/Esa1-associated factor 6, [RH, Score=135, Expect=2e-40]} {Dmel: FBgn0035624, Eaf6, Esa1-associated factor 6, [RH, Score=124, Expect=5e-36]} {Celegans: WBGene00015001, B0025.4, [RH, Score=84.7, Expect=2e-21]} {Smed: dd_Smed_v6_5795_0_1, dd_Smed_v6_5795_0_1, [RH, Score=97.8, Expect=2e-26]} {RNA1509_35773, RNA1509_55660} {RNA1310_42741, RNA1509_35773, RNA1509_55660} {RNA1509_35773, RNA1509_55660, RNA815_21878}

Mlig455_065367 {REF} {Length: 800} {TRANSSPLICED} {Pfam: Histone acetyltransferase subunit NuA4 [PF09340.12, score=94.6]} {Human: ENSG00000163875, MEAF6, MYST/Esa1 associated factor 6, [RH, Score=135, Expect=2e-40]} {Mouse: ENSMUSG00000028863, Meaf6, MYST/Esa1-associated factor 6, [RH, Score=135, Expect=1e-40]} {Dmel: FBgn0035624, Eaf6, Esa1-associated factor 6, [RH, Score=125, Expect=3e-36]} {Celegans: WBGene00015001, B0025.4, [RH, Score=84.7, Expect=2e-21]} {Smed: dd_Smed_v6_5795_0_1, dd_Smed_v6_5795_0_1, [RH, Score=98.6, Expect=8e-27]} {RNA1509_35773} {RNA1310_42741} {RNA815_21878}
3. MligTC455_20466 767 15.98 Mlig455_056385

Neo: -

Age: -

Region-enriched R4: 2.639/0.00011
Region-enriched R5: 1.936/0.00231

Regeneration-upregulated BL: 1.885

Regeneration-enriched BL: 1.885

DDAH1 1.696 - - - 0.727 0.969 - Mlig455_056385 {REF} {Length: 2124} {Pfam: N,N dimethylarginine dimethylhydrolase, eukaryotic [PF19420.1, score=33.7]; Arginine deiminase [PF02274.19, score=26.7]} {Human: ENSG00000153904, DDAH1, dimethylarginine dimethylaminohydrolase 1, [RH, Score=148, Expect=1e-42]; ENSG00000206395, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000226634, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000228128, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000213722, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000227317, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000233076, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000225635, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]} {Mouse: ENSMUSG00000007039, Ddah2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=2e-40]; ENSMUSG00000028194, Ddah1, dimethylarginine dimethylaminohydrolase 1, [RH, Score=139, Expect=2e-39]} {Dmel: FBgn0030467, CG1764, [RH, Score=181, Expect=1e-55]} {Smed: dd_Smed_v6_1460_0_1, dd_Smed_v6_1460_0_1, [RH, Score=306, Expect=3e-105]} {RNA1509_2528} {RNA1310_17359} {RNA815_7449.1}
4. MligTC455_52548 5477 114.11 Mlig455_019938, Mlig455_020012

Neo: Neoblast

Age: -

C12orf10 1.68 - - - 0.969 0.711 -

Mlig455_019938 {REF} {Length: 2818} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0160) [PF03690.15, score=414.8]} {Human: ENSG00000139637, C12orf10, chromosome 12 open reading frame 10, [RH, Score=334, Expect=3e-112]} {Mouse: ENSMUSG00000001285, Myg1, melanocyte proliferating gene 1, [RH, Score=335, Expect=1e-112]} {Dmel: FBgn0037652, CG11980, [RH, Score=253, Expect=2e-81]} {Celegans: WBGene00007787, C27H6.8, UPF0160 protein C27H6.8, [RH, Score=305, Expect=7e-102]} {Smed: dd_Smed_v6_1148_0_1, dd_Smed_v6_1148_0_1, [RH, Score=357, Expect=1e-122]} {RNA1509_5201} {RNA1310_15944, RNA1509_5201} {RNA1509_5201, RNA815_5640.1}

Mlig455_020012 {REF} {Length: 2048} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0160) [PF03690.15, score=417.4]} {Human: ENSG00000139637, C12orf10, chromosome 12 open reading frame 10, [RH, Score=337, Expect=3e-113]} {Mouse: ENSMUSG00000001285, Myg1, melanocyte proliferating gene 1, [RH, Score=337, Expect=1e-113]} {Dmel: FBgn0037652, CG11980, [RH, Score=255, Expect=4e-82]} {Celegans: WBGene00007787, C27H6.8, UPF0160 protein C27H6.8, [RH, Score=308, Expect=3e-103]} {Smed: dd_Smed_v6_1148_0_1, dd_Smed_v6_1148_0_1, [RH, Score=361, Expect=5e-124]} {RNA1509_5201} {RNA1310_15944} {RNA815_5640.1}
5. MligTC455_51403 368 7.67 Mlig455_064786

Neo: -

Age: logFC(26M/2M)=0.618

PRPF6 0.978 - - - - 0.978 - Mlig455_064786 {REF} {Length: 2961} {TRANSSPLICED} {Pfam: PRP1 splicing factor, N-terminal [PF06424.14, score=183.9]; Tetratricopeptide repeat [PF13428.8, score=114.1]; Tetratricopeptide repeat [PF14559.8, score=62.7]; Tetratricopeptide repeat [PF07719.19, score=58.6]; Tetratricopeptide repeat [PF13432.8, score=49.2]; Tetratricopeptide repeat [PF13181.8, score=47.1]; Tetratricopeptide repeat [PF13431.8, score=38.3]; FAT domain [PF02259.25, score=33.9]; Tetratricopeptide repeat [PF00515.30, score=27.0]; TPR repeat [PF13414.8, score=24.0]; Tetratricopeptide repeat [PF13371.8, score=19.2]} {Human: ENSG00000101161, PRPF6, pre-mRNA processing factor 6, [RH, Score=1216, Expect=0.0]} {Mouse: ENSMUSG00000002455, Prpf6, pre-mRNA splicing factor 6, [RH, Score=1222, Expect=0.0]} {Dmel: FBgn0036828, CG6841, [RH, Score=1187, Expect=0.0]} {Celegans: WBGene00013343, prp-6, Yeast PRP (Splicing factor) related, [RH, Score=1030, Expect=0.0]} {Smed: dd_Smed_v6_1153_0_1, dd_Smed_v6_1153_0_1, [RH, Score=980, Expect=0.0]} {RNA1509_2962} {RNA1310_1406.1} {RNA815_394.1}
6. MligTC455_47030 3642 75.87 Mlig455_056061

Neo: -

Age: -

0.965 - - - - 0.965 - Mlig455_056061 {REF} {Length: 1265} {TRANSSPLICED} {RNA1509_10289, RNA1509_4431} {RNA1310_25201.1, RNA1509_10289, RNA1509_4431} {RNA1509_10289, RNA1509_4431, RNA815_11212.1}
7. MligTC455_51402 411 8.56 Mlig455_004611

Neo: -

Age: -

PRPF6 0.961 - - - - 0.961 - Mlig455_004611 {REF} {Length: 3057} {TRANSSPLICED} {Pfam: PRP1 splicing factor, N-terminal [PF06424.14, score=183.9]; Tetratricopeptide repeat [PF13428.8, score=114.2]; Tetratricopeptide repeat [PF14559.8, score=63.1]; Tetratricopeptide repeat [PF07719.19, score=59.2]; Tetratricopeptide repeat [PF13181.8, score=47.5]; Tetratricopeptide repeat [PF13432.8, score=46.9]; Tetratricopeptide repeat [PF13431.8, score=38.7]; FAT domain [PF02259.25, score=33.9]; TPR repeat [PF13414.8, score=26.2]; Tetratricopeptide repeat [PF00515.30, score=26.0]; Tetratricopeptide repeat [PF13371.8, score=20.1]} {Human: ENSG00000101161, PRPF6, pre-mRNA processing factor 6, [RH, Score=1218, Expect=0.0]} {Mouse: ENSMUSG00000002455, Prpf6, pre-mRNA splicing factor 6, [RH, Score=1224, Expect=0.0]} {Dmel: FBgn0036828, CG6841, [RH, Score=1187, Expect=0.0]} {Celegans: WBGene00013343, prp-6, Yeast PRP (Splicing factor) related, [RH, Score=1029, Expect=0.0]} {Smed: dd_Smed_v6_1153_0_1, dd_Smed_v6_1153_0_1, [RH, Score=979, Expect=0.0]} {RNA1509_2962} {RNA1310_1406.1, RNA1509_2962} {RNA1509_2962, RNA815_394.1}
8. MligTC455_25168 544 11.33 Mlig455_006942

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 1.378/0.02521

SPECC1L 0.955 - - - 0.955 - - Mlig455_006942 {REF} {Length: 4612} {TRANSSPLICED} {Pfam: Calponin homology (CH) domain [PF00307.33, score=69.6]; CAMSAP CH domain [PF11971.10, score=21.8]} {Human: ENSG00000100014, SPECC1L, sperm antigen with calponin homology and coiled-coil domains 1 like, [RH, Score=255, Expect=5e-70]} {Mouse: ENSMUSG00000033444, Specc1l, sperm antigen with calponin homology and coiled-coil domains 1-like, [RH, Score=253, Expect=1e-69]} {Dmel: FBgn0085446, CG34417, [Score=117, Expect=2e-29]} {Celegans: WBGene00020530, T15B12.1, [Score=129, Expect=1e-31]} {Smed: dd_Smed_v6_7845_0_1, dd_Smed_v6_7845_0_1, [RH, Score=158, Expect=2e-39]} {RNA1509_45990, RNA1509_7795} {RNA1310_10182.1, RNA1509_45990} {RNA1509_45990, RNA815_11375}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA