TomoSeq data search

Data search

Results for MligTC455_51402

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51402

411

8.56

Mlig455_004611

Neo: -

Age: -

PRPF6

Mlig455_004611 {REF} {Length: 3057} {TRANSSPLICED} {Pfam: PRP1 splicing factor, N-terminal [PF06424.14, score=183.9]; Tetratricopeptide repeat [PF13428.8, score=114.2]; Tetratricopeptide repeat [PF14559.8, score=63.1]; Tetratricopeptide repeat [PF07719.19, score=59.2]; Tetratricopeptide repeat [PF13181.8, score=47.5]; Tetratricopeptide repeat [PF13432.8, score=46.9]; Tetratricopeptide repeat [PF13431.8, score=38.7]; FAT domain [PF02259.25, score=33.9]; TPR repeat [PF13414.8, score=26.2]; Tetratricopeptide repeat [PF00515.30, score=26.0]; Tetratricopeptide repeat [PF13371.8, score=20.1]} {Human: ENSG00000101161, PRPF6, pre-mRNA processing factor 6, [RH, Score=1218, Expect=0.0]} {Mouse: ENSMUSG00000002455, Prpf6, pre-mRNA splicing factor 6, [RH, Score=1224, Expect=0.0]} {Dmel: FBgn0036828, CG6841, [RH, Score=1187, Expect=0.0]} {Celegans: WBGene00013343, prp-6, Yeast PRP (Splicing factor) related, [RH, Score=1029, Expect=0.0]} {Smed: dd_Smed_v6_1153_0_1, dd_Smed_v6_1153_0_1, [RH, Score=979, Expect=0.0]} {RNA1509_2962} {RNA1310_1406.1, RNA1509_2962} {RNA1509_2962, RNA815_394.1}

Cumulative graph for MligTC455_51402

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.167	3.547	0.93827	1.00000
RegionR2	-0.382	3.547	0.62576	0.96808
RegionR3	-0.051	3.547	0.94570	1.00000
RegionR4	0.7	3.547	0.31389	0.62955
RegionR5	0.811	3.547	0.13903	0.38321
RegionR6	-0.617	3.547	0.41308	0.98157
RegionR7	-0.116	3.547	0.90645	1.00000
RegionR8	-0.18	3.547	0.89611	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.843	3.547	0.35596	1.00000
RegenerationR2	0.76	3.547	0.15412	0.58991
RegenerationR3	0.9	3.547	0.13750	0.56277
RegenerationR4	0.943	3.547	0.10430	0.49809
RegenerationR5	0.982	3.547	0.05827	0.38469
RegenerationR6	1.539	3.547	0.01653	0.15858
RegenerationBL	1.842	3.547	0.01100	0.10653
RegenerationTP	1.931	3.547	0.02313	0.25809

Genes with expression patterns similar to MligTC455_51402

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51402	411	8.56	Mlig455_004611	Neo: - Age: -	PRPF6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_004611 {REF} {Length: 3057} {TRANSSPLICED} {Pfam: PRP1 splicing factor, N-terminal [PF06424.14, score=183.9]; Tetratricopeptide repeat [PF13428.8, score=114.2]; Tetratricopeptide repeat [PF14559.8, score=63.1]; Tetratricopeptide repeat [PF07719.19, score=59.2]; Tetratricopeptide repeat [PF13181.8, score=47.5]; Tetratricopeptide repeat [PF13432.8, score=46.9]; Tetratricopeptide repeat [PF13431.8, score=38.7]; FAT domain [PF02259.25, score=33.9]; TPR repeat [PF13414.8, score=26.2]; Tetratricopeptide repeat [PF00515.30, score=26.0]; Tetratricopeptide repeat [PF13371.8, score=20.1]} {Human: ENSG00000101161, PRPF6, pre-mRNA processing factor 6, [RH, Score=1218, Expect=0.0]} {Mouse: ENSMUSG00000002455, Prpf6, pre-mRNA splicing factor 6, [RH, Score=1224, Expect=0.0]} {Dmel: FBgn0036828, CG6841, [RH, Score=1187, Expect=0.0]} {Celegans: WBGene00013343, prp-6, Yeast PRP (Splicing factor) related, [RH, Score=1029, Expect=0.0]} {Smed: dd_Smed_v6_1153_0_1, dd_Smed_v6_1153_0_1, [RH, Score=979, Expect=0.0]} {RNA1509_2962} {RNA1310_1406.1, RNA1509_2962} {RNA1509_2962, RNA815_394.1}
2.	MligTC455_51403	368	7.67	Mlig455_064786	Neo: - Age: logFC(26M/2M)=0.618	PRPF6	4.66	0.989	-	0.838	0.853	0.986	0.994	Mlig455_064786 {REF} {Length: 2961} {TRANSSPLICED} {Pfam: PRP1 splicing factor, N-terminal [PF06424.14, score=183.9]; Tetratricopeptide repeat [PF13428.8, score=114.1]; Tetratricopeptide repeat [PF14559.8, score=62.7]; Tetratricopeptide repeat [PF07719.19, score=58.6]; Tetratricopeptide repeat [PF13432.8, score=49.2]; Tetratricopeptide repeat [PF13181.8, score=47.1]; Tetratricopeptide repeat [PF13431.8, score=38.3]; FAT domain [PF02259.25, score=33.9]; Tetratricopeptide repeat [PF00515.30, score=27.0]; TPR repeat [PF13414.8, score=24.0]; Tetratricopeptide repeat [PF13371.8, score=19.2]} {Human: ENSG00000101161, PRPF6, pre-mRNA processing factor 6, [RH, Score=1216, Expect=0.0]} {Mouse: ENSMUSG00000002455, Prpf6, pre-mRNA splicing factor 6, [RH, Score=1222, Expect=0.0]} {Dmel: FBgn0036828, CG6841, [RH, Score=1187, Expect=0.0]} {Celegans: WBGene00013343, prp-6, Yeast PRP (Splicing factor) related, [RH, Score=1030, Expect=0.0]} {Smed: dd_Smed_v6_1153_0_1, dd_Smed_v6_1153_0_1, [RH, Score=980, Expect=0.0]} {RNA1509_2962} {RNA1310_1406.1} {RNA815_394.1}
3.	MligTC455_50858	587	12.23	Mlig455_007072	Neo: - Age: logFC(26M/2M)=-0.726	EIF5	1.776	0.800	-	-	-	0.976	-	Mlig455_007072 {REF} {Length: 2213} {TRANSSPLICED} {Pfam: Domain found in IF2B/IF5 [PF01873.19, score=128.6]; eIF4-gamma/eIF5/eIF2-epsilon [PF02020.20, score=61.2]} {Human: ENSG00000100664, EIF5, eukaryotic translation initiation factor 5, [Score=286, Expect=2e-91]} {Mouse: ENSMUSG00000021282, Eif5, eukaryotic translation initiation factor 5, [RH, Score=211, Expect=2e-63]} {Dmel: FBgn0030719, eIF5, eukaryotic translation initiation factor 5, [Score=288, Expect=4e-92]} {Celegans: WBGene00016496, C37C3.2, Eukaryotic translation initiation factor 5, [RH, Score=276, Expect=3e-88]} {Smed: dd_Smed_v6_2267_0_1, dd_Smed_v6_2267_0_1, [RH, Score=194, Expect=8e-58]} {RNA1509_2860} {RNA1310_1097.1} {RNA815_11901.1}
4.	MligTC455_46591	4307	89.73	Mlig455_009220, Mlig455_037089	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.301	UBE2I	0.961	-	-	-	-	0.961	-	Mlig455_009220 {REF} {Length: 1080} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=149.4]} {Human: ENSG00000103275, UBE2I, ubiquitin conjugating enzyme E2 I, [RH, Score=262, Expect=1e-90]} {Mouse: ENSMUSG00000015120, Ube2i, ubiquitin-conjugating enzyme E2I, [RH, Score=262, Expect=7e-91]} {Dmel: FBgn0010602, lwr, lesswright, [RH, Score=263, Expect=1e-91]} {Celegans: WBGene00006706, ubc-9, SUMO-conjugating enzyme UBC9, [RH, Score=251, Expect=1e-86]} {Smed: dd_Smed_v6_1535_0_1, dd_Smed_v6_1535_0_1, [RH, Score=272, Expect=3e-95]} {RNA1509_15989} {RNA1310_29502.3} {RNA815_13716.1} Mlig455_037089 {REF} {Length: 1124} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=149.4]} {Human: ENSG00000103275, UBE2I, ubiquitin conjugating enzyme E2 I, [RH, Score=262, Expect=1e-90]} {Mouse: ENSMUSG00000015120, Ube2i, ubiquitin-conjugating enzyme E2I, [RH, Score=262, Expect=7e-91]} {Dmel: FBgn0010602, lwr, lesswright, [RH, Score=263, Expect=1e-91]} {Celegans: WBGene00006706, ubc-9, SUMO-conjugating enzyme UBC9, [RH, Score=251, Expect=1e-86]} {Smed: dd_Smed_v6_1535_0_1, dd_Smed_v6_1535_0_1, [RH, Score=272, Expect=3e-95]} {RNA1509_15989, RNA1509_20179, RNA1509_32559, RNA1509_59307, RNA1509_6541} {RNA1310_29502.3, RNA1509_15989, RNA1509_20179, RNA1509_32559, RNA1509_59307, RNA1509_6541} {RNA1509_15989, RNA1509_20179, RNA1509_32559, RNA1509_59307, RNA1509_6541, RNA815_13716.1}
5.	MligTC455_48284	1088	22.66	Mlig455_013758	Neo: - Age: - Region-enriched R5: 1.130/0.00153 Region-enriched R6: 1.111/0.02492	NAPG	0.952	-	-	-	-	0.952	-	Mlig455_013758 {REF} {Length: 1675} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=65.5]; Tetratricopeptide repeat [PF13424.8, score=24.5]} {Human: ENSG00000134265, NAPG, NSF attachment protein gamma, [RH, Score=194, Expect=1e-59]} {Mouse: ENSMUSG00000024581, Napg, N-ethylmaleimide sensitive fusion protein attachment protein gamma, [RH, Score=197, Expect=5e-61]} {Dmel: FBgn0028552, gammaSnap1, gamma Soluble NSF attachment protein 1, [RH, Score=179, Expect=4e-54]} {Celegans: WBGene00013345, Y59A8B.8, [RH, Score=108, Expect=3e-27]} {Smed: dd_Smed_v6_4864_1_1, dd_Smed_v6_4864_1_1, [RH, Score=176, Expect=4e-53]} {RNA1509_29580, RNA1509_33834, RNA1509_34723} {RNA1310_19132.1, RNA1509_29580, RNA1509_33834, RNA1509_34723} {RNA1509_29580, RNA1509_33834, RNA1509_34723, RNA815_7692.1}
6.	MligTC455_24194	11878	247.46	Mlig455_012113	Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=0.220	RPL8	0.95	-	-	-	-	0.950	-	Mlig455_012113 {REF} {Length: 944} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=154.7]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=60.1]} {Human: ENSG00000161016, RPL8, ribosomal protein L8, [RH, Score=414, Expect=7e-148]} {Mouse: ENSMUSG00000003970, Rpl8, ribosomal protein L8, [RH, Score=414, Expect=5e-148]} {Dmel: FBgn0261602, RpL8, Ribosomal protein L8, [RH, Score=410, Expect=1e-146]} {Celegans: WBGene00004413, rpl-2, 60S ribosomal protein L8, [RH, Score=395, Expect=1e-140]} {Smed: dd_Smed_v6_108_0_1, dd_Smed_v6_108_0_1, [RH, Score=399, Expect=2e-142]} {RNA1509_11382, RNA1509_1903, RNA1509_5112, RNA1509_7259} {RNA1310_38364.1, RNA1509_11382, RNA1509_1903, RNA1509_5112, RNA1509_7259} {RNA1509_11382, RNA1509_1903, RNA1509_5112, RNA1509_7259, RNA815_9295.2}

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