M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_46666

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46666 48 1.01 Mlig455_058298

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R2: 5.373/0.02849

Regeneration-enriched R3: 8.854

 HHAT Mlig455_058298 {REF} {Length: 3155} {Pfam: MBOAT, membrane-bound O-acyltransferase family [PF03062.21, score=77.9]} {Human: ENSG00000280680, HHAT, hedgehog acyltransferase, [Score=126, Expect=1e-30]; ENSG00000054392, HHAT, hedgehog acyltransferase, [Score=126, Expect=1e-30]} {Mouse: ENSMUSG00000037375, Hhat, hedgehog acyltransferase, [Score=134, Expect=8e-34]} {Celegans: WBGene00013312, hhat-2, Homolog of Hedgehog AcylTransferase, [Score=92.8, Expect=8e-20]} {Smed: dd_Smed_v6_17532_0_1, dd_Smed_v6_17532_0_1, [Score=59.3, Expect=3e-09]} {RNA1509_51932} {RNA1310_15625} {RNA815_4453.2}

Cumulative graph for MligTC455_46666

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.769 1.415 0.99954 1.00000
RegionR2 5.373 1.415 0.00148 0.02849
RegionR3 -2.672 1.415 0.99964 1.00000
RegionR4 -3.324 1.415 0.99015 1.00000
RegionR5 2.918 1.415 0.02379 0.10967
RegionR6 0.08 1.415 0.65968 1.00000
RegionR7 3.91 1.415 0.01564 0.22665
RegionR8 -0.516 1.415 0.99972 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 7.766 1.415 0.99984 1.00000
RegenerationR2 3.992 1.415 0.00017 0.01628
RegenerationR3 8.854 1.415 0.00000 0.00027
RegenerationR4 4.06 1.415 0.01254 0.17226
RegenerationR5 1.439 1.415 0.06279 0.39775
RegenerationR6 5.529 1.415 0.00094 0.03325
RegenerationBL 5.106 1.415 0.02229 0.16304
RegenerationTP 3.813 1.415 0.10356 0.49855


Genes with expression patterns similar to MligTC455_46666

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46666 48 1.01 Mlig455_058298

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R2: 5.373/0.02849

Regeneration-enriched R3: 8.854

 HHAT 4 1.000 1.000 - - 1.000 1.000 Mlig455_058298 {REF} {Length: 3155} {Pfam: MBOAT, membrane-bound O-acyltransferase family [PF03062.21, score=77.9]} {Human: ENSG00000280680, HHAT, hedgehog acyltransferase, [Score=126, Expect=1e-30]; ENSG00000054392, HHAT, hedgehog acyltransferase, [Score=126, Expect=1e-30]} {Mouse: ENSMUSG00000037375, Hhat, hedgehog acyltransferase, [Score=134, Expect=8e-34]} {Celegans: WBGene00013312, hhat-2, Homolog of Hedgehog AcylTransferase, [Score=92.8, Expect=8e-20]} {Smed: dd_Smed_v6_17532_0_1, dd_Smed_v6_17532_0_1, [Score=59.3, Expect=3e-09]} {RNA1509_51932} {RNA1310_15625} {RNA815_4453.2}
2. MligTC455_48824 535 11.15 Mlig455_021307

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.510

Region-enriched R5: 7.228/0.00001

 1.977 0.997 0.980 - - - - Mlig455_021307 {REF} {Length: 1933} {RNA1509_1444, RNA1509_3147, RNA1509_34404, RNA1509_3917} {RNA1310_72105, RNA1509_1444, RNA1509_3147, RNA1509_34404, RNA1509_3917} {RNA1509_1444, RNA1509_3147, RNA1509_34404, RNA1509_3917, RNA815_32090}
3. MligTC455_24975 33 0.7 Mlig455_001679

Neo: -

Age: -

 1.961 - 0.979 - - - 0.982 Mlig455_001679 {REF} {Length: 1106} {NoTransDecoderORF} {RNA1310_79875}
4. MligTC455_22585 1831 38.14 Mlig455_037932

Neo: -

Age: logFC(26M/2M)=-0.330

Region-enriched R5: 6.325/0.00001

 1.924 0.977 0.947 - - - - Mlig455_037932 {REF} {Length: 512} {RNA1509_10443, RNA1509_1359, RNA1509_2019, RNA1509_22108, RNA1509_48351, RNA1509_54687, RNA1509_5787, RNA1509_940} {RNA1310_81873.1, RNA1509_10443, RNA1509_1359, RNA1509_2019, RNA1509_22108, RNA1509_48351, RNA1509_54687, RNA1509_5787, RNA1509_940} {RNA1509_10443, RNA1509_1359, RNA1509_2019, RNA1509_22108, RNA1509_48351, RNA1509_54687, RNA1509_5787, RNA1509_940, RNA815_41075}
5. MligTC455_17007 1219 25.39 Mlig455_055131

Neo: -

Age: logFC(26M/2M)=-0.561

Region-enriched R5: 6.753/0.00000

 ANK1 1.912 0.945 0.967 - - - - Mlig455_055131 {REF} {Length: 3713} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=136.9]; Ankyrin repeats (many copies) [PF13857.8, score=125.1]; Ankyrin repeats (many copies) [PF13637.8, score=113.3]; Ankyrin repeat [PF00023.32, score=94.9]; Ankyrin repeat [PF13606.8, score=87.3]; Mab-21 protein [PF03281.16, score=51.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=137, Expect=3e-32]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=127, Expect=2e-29]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=125, Expect=2e-28]; ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=122, Expect=3e-28]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=122, Expect=1e-27]} {Dmel: FBgn0039590, CG10011, [Score=126, Expect=6e-29]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=113, Expect=4e-25]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=124, Expect=2e-29]} {RNA1509_56892} {RNA1310_14215} {RNA815_12297}
6. MligTC455_17004 1478 30.79 Mlig455_055086

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.861

Region-enriched R5: 5.591/0.00169
Region-enriched R2: 4.869/0.01201

Regeneration-downregulated R5: -9.308

Regeneration-depleted R5: -9.308

 1.895 0.943 0.952 - - - - Mlig455_055086 {REF} {Length: 437} {RNA1509_5324} {RNA1310_89627} {RNA815_5423.3}
7. MligTC455_22584 1485 30.94 Mlig455_037833

Neo: -

Age: Up-Down-Down

Region-enriched R5: 5.505/0.00077

 1.885 0.953 0.932 - - - - Mlig455_037833 {REF} {Length: 515} {NoTransDecoderORF} {RNA1509_5787} {RNA1310_81873.2} {RNA815_41075}
8. MligTC455_19925 2523 52.56 Mlig455_042140, Mlig455_065838

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.311

Region-enriched R5: 4.776/0.00396

Regeneration-downregulated R5: -10.657

Regeneration-depleted R5: -10.657

 1.883 0.931 0.952 - - - -

Mlig455_042140 {REF} {Length: 513} {RNA1509_2632, RNA1509_3473} {RNA1310_66502.1, RNA1509_2632, RNA1509_3473} {RNA1509_2632, RNA1509_3473, RNA815_40213}

Mlig455_065838 {REF} {Length: 440} {NoTransDecoderORF} {RNA1509_3473, RNA1509_36382} {RNA1310_66502.1, RNA1509_36382} {RNA1509_36382, RNA815_40213}
9. MligTC455_17008 1308 27.25 Mlig455_064024

Neo: -

Age: -

Region-enriched R5: 6.717/0.00000

 ANK1 1.88 0.918 0.962 - - - - Mlig455_064024 {REF} {Length: 760} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13857.8, score=126.0]; Ankyrin repeats (many copies) [PF13637.8, score=116.2]; Ankyrin repeat [PF00023.32, score=98.7]; Ankyrin repeat [PF13606.8, score=89.6]; Mab-21 protein [PF03281.16, score=52.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=129, Expect=3e-29]; ENSG00000151150, ANK3, ankyrin 3, [Score=128, Expect=6e-29]; ENSG00000145362, ANK2, ankyrin 2, [Score=125, Expect=3e-28]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=131, Expect=3e-30]} {Dmel: FBgn0039590, CG10011, [Score=124, Expect=3e-28]} {Celegans: WBGene00015646, mlt-10, [RH, Score=173, Expect=1e-44]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=130, Expect=6e-31]} {RNA1509_29050, RNA1509_4152, RNA1509_5324} {RNA1310_72667.1, RNA1509_29050, RNA1509_5324} {RNA1509_29050, RNA1509_5324, RNA815_5423.1}
10. MligTC455_54041 1218 25.38 Mlig455_056643

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.517

Region-enriched R5: 7.648/0.00003

 1.88 0.915 0.965 - - - - Mlig455_056643 {REF} {Length: 179} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_20024} {RNA1310_122974} {RNA815_80.2}
11. MligTC455_31875 62 1.3 Mlig455_036547, Mlig455_057803, Mlig455_070413

Neo: -

Age: -

 1.867 - - - - 0.904 0.963

Mlig455_036547 {REF} {Length: 312} {RNA1509_6194} {RNA1310_1675.2} {RNA815_2266}

Mlig455_057803 {REF} {Length: 312} {RNA1509_6194} {RNA1310_1675.2} {RNA815_2266}

Mlig455_070413 {REF} {Length: 4095} {RNA1509_6194} {RNA1310_1675.1} {RNA815_2266}
12. MligTC455_17005 1198 24.95 Mlig455_055085

Neo: -

Age: logFC(26M/2M)=-0.672

Region-enriched R5: 5.466/0.00001

 ANK1 1.848 0.879 0.969 - - - - Mlig455_055085 {REF} {Length: 4336} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13857.8, score=126.0]; Ankyrin repeats (many copies) [PF13637.8, score=116.2]; Ankyrin repeat [PF00023.32, score=98.7]; Ankyrin repeat [PF13606.8, score=89.6]; Mab-21 protein [PF03281.16, score=52.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=129, Expect=3e-29]; ENSG00000151150, ANK3, ankyrin 3, [Score=128, Expect=6e-29]; ENSG00000145362, ANK2, ankyrin 2, [Score=125, Expect=3e-28]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=131, Expect=3e-30]} {Dmel: FBgn0039590, CG10011, [Score=124, Expect=3e-28]} {Celegans: WBGene00015646, mlt-10, [RH, Score=173, Expect=1e-44]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=130, Expect=6e-31]} {RNA1509_56892} {RNA1310_14215} {RNA815_12297}
13. MligTC455_38185 1903 39.64 Mlig455_021321

Neo: -

Age: logFC(26M/2M)=-0.353

Region-enriched R5: 5.802/0.00000

Regeneration-downregulated R2: -7.443

Regeneration-depleted R2: -7.443

 1.846 0.887 0.959 - - - - Mlig455_021321 {REF} {Length: 801} {RNA1509_1093, RNA1509_12817, RNA1509_14343, RNA1509_21404, RNA1509_26001, RNA1509_2859, RNA1509_29365, RNA1509_33213, RNA1509_45497} {RNA1310_42010, RNA1509_1093, RNA1509_12817, RNA1509_14343, RNA1509_21404, RNA1509_26001, RNA1509_2859, RNA1509_29365, RNA1509_33213, RNA1509_45497} {RNA1509_1093, RNA1509_12817, RNA1509_14343, RNA1509_21404, RNA1509_26001, RNA1509_2859, RNA1509_29365, RNA1509_33213, RNA1509_45497, RNA815_32090}
14. MligTC455_17010 1661 34.6 Mlig455_064025

Neo: -

Age: logFC(26M/2M)=-0.608

Region-enriched R5: 6.695/0.00000

Regeneration-downregulated R2: -8.945

Regeneration-depleted R2: -8.945

 1.813 0.859 0.954 - - - - Mlig455_064025 {REF} {Length: 465} {RNA1509_29243} {RNA1310_89627} {RNA815_5423.3}
15. MligTC455_52901 251 5.22 Mlig455_056642

Neo: -

Age: -

Region-enriched R5: 7.903/0.00238

 1.808 0.995 0.813 - - - - Mlig455_056642 {REF} {Length: 312} {NoTransDecoderORF} {RNA1509_12125, RNA1509_1356, RNA1509_20024} {RNA1310_122974, RNA1509_12125, RNA1509_1356, RNA1509_20024} {RNA1509_12125, RNA1509_1356, RNA1509_20024, RNA815_80.2}
16. MligTC455_47200 213 4.43 Mlig455_023743

Neo: -

Age: -

 0.992 - 0.992 - - - - Mlig455_023743 {REF} {Length: 636} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=25.3]}
17. MligTC455_14084 59 1.24 Mlig455_012427

Neo: -

Age: -

Region-enriched R1: 9.569/0.02734

 0.987 - 0.987 - - - - Mlig455_012427 {REF} {Length: 626} {Dmel: FBgn0035253, CG7971, [Score=53.9, Expect=3e-08]}
18. MligTC455_01543 6 0.12 Mlig455_043315

Neo: -

Age: -

 0.986 - 0.986 - - - - Mlig455_043315 {REF} {Length: 311}
19. MligTC455_06227 228 4.75 Mlig455_036666, Mlig455_036679

Neo: -

Age: -

 0.986 - 0.986 - - - -

Mlig455_036666 {REF} {Length: 780} {RNA1310_112949}

Mlig455_036679 {REF} {Length: 4100} {RNA1310_79588}
20. MligTC455_01297 70 1.46 Mlig455_042285

Neo: -

Age: -

 0.985 - 0.985 - - - - Mlig455_042285 {REF} {Length: 118} {NoTransDecoderORF}
21. MligTC455_32108 22 0.46 Mlig455_008618, Mlig455_056900

Neo: -

Age: -

 0.985 - 0.985 - - - -

Mlig455_008618 {REF} {Length: 3744} {RNA1509_42835} {RNA1310_17405} {RNA815_13146}

Mlig455_056900 {REF} {Length: 1049} {Pfam: RNase H [PF00075.26, score=39.0]} {RNA1509_6898} {RNA1310_269.1} {RNA815_9530.1}
22. MligTC455_09772 568 11.83 Mlig455_007711

Neo: -

Age: -

 0.984 - 0.984 - - - - Mlig455_007711 {REF} {Length: 762} {Pfam: RNase H [PF00075.26, score=32.9]; zinc-binding in reverse transcriptase [PF13966.8, score=20.5]} {RNA1509_42121} {RNA1310_28357.1} {RNA815_28691}
23. MligTC455_31935 299 6.24 Mlig455_046201

Neo: -

Age: -

Region-enriched R1: 6.310/0.00233

 0.982 - 0.982 - - - - Mlig455_046201 {REF} {Length: 1782} {Pfam: RICH domain [PF05062.14, score=19.2]} {RNA1509_2515} {RNA1310_26891} {RNA815_3258.1}
24. MligTC455_08796 92 1.91 Mlig455_005779

Neo: -

Age: Up-Down-Up

 0.981 - - - - - 0.981 Mlig455_005779 {REF} {Length: 406} {NoTransDecoderORF} {RNA1509_40279} {RNA1310_35227} {RNA815_50075}
25. MligTC455_29033 123 2.56 Mlig455_038953

Neo: -

Age: -

 0.978 - 0.978 - - - - Mlig455_038953 {REF} {Length: 196} {NoTransDecoderORF} {RNA1509_34915} {RNA1310_8956.1} {RNA815_41033.1}
26. MligTC455_06473 165 3.43 Mlig455_010748

Neo: -

Age: -

 0.973 - - - - - 0.973 Mlig455_010748 {REF} {Length: 1279} {NoTransDecoderORF}
27. MligTC455_38112 144 3 Mlig455_035800, Mlig455_068307

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.078

 0.97 - - - - - 0.970

Mlig455_035800 {REF} {Length: 440} {NoTransDecoderORF}

Mlig455_068307 {REF} {Length: 195} {NoTransDecoderORF}
28. MligTC455_27838 246 5.12 Mlig455_060678

Neo: -

Age: Down-Down-Down

Regeneration-upregulated TP: 4.727

Regeneration-enriched TP: 4.727

 TRPM1 0.967 - - - - - 0.967 Mlig455_060678 {REF} {Length: 14356} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.6]; Ankyrin repeats (3 copies) [PF12796.9, score=80.1]; Ankyrin repeats (many copies) [PF13857.8, score=39.8]; Ankyrin repeat [PF13606.8, score=39.5]; Ankyrin repeat [PF00023.32, score=34.0]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.2, Expect=6e-07]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.2, Expect=5e-07]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=56.2, Expect=4e-07]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=54.3, Expect=1e-06]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=55.8, Expect=4e-07]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=58.2, Expect=6e-08]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=97.1, Expect=4e-20]} {RNA1509_29189} {RNA1310_131.1} {RNA815_52.1}
29. MligTC455_07285 48 1 Mlig455_045441

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_045441 {REF} {Length: 504} {NoTransDecoderORF}
30. MligTC455_13251 89 1.86 Mlig455_005191

Neo: -

Age: logFC(26M/2M)=-0.503

 0.965 - - - - - 0.965 Mlig455_005191 {REF} {Length: 651} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=36.6]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=41.2, Expect=9e-06]} {RNA1509_40279} {RNA1310_35227} {RNA815_50075}
31. MligTC455_29055 220 4.58 Mlig455_033755

Neo: -

Age: -

 0.965 - 0.965 - - - - Mlig455_033755 {REF} {Length: 2091} {RNA1509_54569} {RNA1310_8245} {RNA815_27178}
32. MligTC455_34488 72 1.5 Mlig455_051688

Neo: -

Age: -

 DAG1 0.961 - - - - - 0.961 Mlig455_051688 {REF} {Length: 4571} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=47.3]; Alpha-Dystroglycan N-terminal domain 2 [PF18424.3, score=31.6]} {Human: ENSG00000173402, DAG1, dystroglycan 1, [RH, Score=61.2, Expect=1e-08]} {Mouse: ENSMUSG00000039952, Dag1, dystroglycan 1, [RH, Score=63.5, Expect=2e-09]} {Smed: dd_Smed_v6_11814_0_1, dd_Smed_v6_11814_0_1, [RH, Score=82.8, Expect=8e-16]} {RNA1509_57075} {RNA1310_1596.1, RNA1509_57075} {RNA1509_57075, RNA815_7113}
33. MligTC455_07851 152 3.16 Mlig455_000950

Neo: -

Age: -

Region-enriched R4: 5.566/0.00142

 0.96 - - - - - 0.960 Mlig455_000950 {REF} {Length: 404} {NoTransDecoderORF}
34. MligTC455_28313 86 1.79 Mlig455_046339

Neo: -

Age: -

 0.96 - 0.960 - - - - Mlig455_046339 {REF} {Length: 636} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=70.9, Expect=3e-14]} {RNA1310_66537}
35. MligTC455_26267 156 3.26 Mlig455_055846

Neo: -

Age: Up-Down-Down

 0.957 - - - - - 0.957 Mlig455_055846 {REF} {Length: 4335} {Pfam: Mucin-like [PF16058.7, score=19.8]} {RNA1509_53350} {RNA1310_5450.1} {RNA815_7717.1}
36. MligTC455_40780 107 2.22 Mlig455_000276, Mlig455_024108, Mlig455_035730, Mlig455_058355

Neo: -

Age: -

 0.957 - 0.957 - - - -

Mlig455_000276 {REF} {Length: 1350} {RNA1310_30070} {RNA815_59383}

Mlig455_024108 {REF} {Length: 1999} {RNA1310_30070} {RNA815_59383}

Mlig455_035730 {REF} {Length: 2143} {RNA1310_30070} {RNA815_59383}

Mlig455_058355 {REF} {Length: 1365} {RNA1310_30070} {RNA815_59383}
37. MligTC455_31620 727 15.14 Mlig455_010746, Mlig455_026255, Mlig455_030076, Mlig455_034157, Mlig455_045792, Mlig455_053595, Mlig455_070973

Neo: -

Age: -

Regeneration-upregulated BL: 4.584

Regeneration-enriched BL: 4.584

 0.956 - - - - - 0.956

Mlig455_010746 {REF} {Length: 603} {Celegans: WBGene00019192, H12I13.3, [Score=83.2, Expect=1e-19]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=44.7, Expect=3e-06]} {RNA1509_39854} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_026255 {REF} {Length: 447} {Celegans: WBGene00016348, C33E10.6, [Score=132, Expect=5e-34]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=113, Expect=6e-28]} {RNA1509_39854} {RNA1310_17473} {RNA815_1342.1}

Mlig455_030076 {REF} {Length: 447} {Celegans: WBGene00016348, C33E10.6, [Score=132, Expect=5e-34]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=113, Expect=6e-28]} {RNA1509_39854} {RNA1310_17473} {RNA815_1342.1}

Mlig455_034157 {REF} {Length: 1056} {Celegans: WBGene00016348, C33E10.6, [Score=132, Expect=5e-34]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=113, Expect=6e-28]} {RNA1509_8946} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_045792 {REF} {Length: 686} {Celegans: WBGene00019192, H12I13.3, [Score=159, Expect=8e-46]} {Smed: dd_Smed_v6_9974_1_9, dd_Smed_v6_9974_1_9, [Score=112, Expect=7e-29]} {RNA1509_50023} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_053595 {REF} {Length: 455} {Celegans: WBGene00019192, H12I13.3, [Score=159, Expect=8e-46]} {Smed: dd_Smed_v6_9974_1_9, dd_Smed_v6_9974_1_9, [Score=112, Expect=7e-29]} {RNA1509_50023} {RNA1310_3396.2} {RNA815_1342.1}

Mlig455_070973 {REF} {Length: 325} {Celegans: WBGene00016348, C33E10.6, [Score=132, Expect=5e-34]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=113, Expect=6e-28]} {RNA1509_39854} {RNA1310_17473} {RNA815_1342.1}
38. MligTC455_07206 105 2.19 Mlig455_032806

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_032806 {REF} {Length: 618} {NoTransDecoderORF} {RNA1310_136285}
39. MligTC455_49709 228 4.74 Mlig455_024769, Mlig455_038951

Neo: -

Age: -

 0.952 - - - - - 0.952

Mlig455_024769 {REF} {Length: 560} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.8]} {Smed: dd_Smed_v6_19123_0_8, dd_Smed_v6_19123_0_8, [Score=73.9, Expect=1e-15]} {RNA1509_31268} {RNA1310_89323} {RNA815_51068}

Mlig455_038951 {REF} {Length: 1037} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=74.6]} {Smed: dd_Smed_v6_19123_0_4, dd_Smed_v6_19123_0_4, [Score=60.8, Expect=4e-10]} {RNA1509_31268} {RNA1310_10452.2} {RNA815_28501}
40. MligTC455_29067 766 15.96 Mlig455_052924, Mlig455_062051

Neo: -

Age: -

 0.951 - - - - - 0.951

Mlig455_052924 {REF} {Length: 5034} {Pfam: PHD-finger [PF00628.31, score=24.4]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=22.7]; PHD - plant homeodomain finger protein [PF07227.13, score=19.7]} {RNA1509_29353} {RNA1310_4523} {RNA815_17419}

Mlig455_062051 {REF} {Length: 5910} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=82.0]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=94.4, Expect=3e-21]} {RNA1509_23986} {RNA1310_4523} {RNA815_17419}
41. MligTC455_57726 39 0.82 Mlig455_030142

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_030142 {REF} {Length: 234} {NoTransDecoderORF} {RNA1310_117714}
42. MligTC455_23370 144 3.01 Mlig455_065633

Neo: -

Age: Down-Up-Up

 0.95 - - - - - 0.950 Mlig455_065633 {REF} {Length: 1422} {RNA1509_56375} {RNA1310_29166.1, RNA1509_56375} {RNA1509_56375, RNA815_11123}
43. MligTC455_26081 253 5.27 Mlig455_006766, Mlig455_048559

Neo: -

Age: -

 0.95 - - - - - 0.950

Mlig455_006766 {REF} {Length: 1897} {RNA1509_9219} {RNA1310_468} {RNA815_355.1}

Mlig455_048559 {REF} {Length: 804} {Pfam: Phage antitermination protein Q [PF06323.13, score=19.1]} {RNA1509_9219} {RNA1310_468} {RNA815_355.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA