M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_24975

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24975 33 0.70 Mlig455_001679

Neo: -

Age: -

 Mlig455_001679 {REF} {Length: 1106} {NoTransDecoderORF} {RNA1310_79875}

Cumulative graph for MligTC455_24975

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.776 1.089 0.99986 1.00000
RegionR2 0.885 1.089 0.99984 1.00000
RegionR3 1.634 1.089 0.16037 0.67825
RegionR4 -2.077 1.089 0.99978 1.00000
RegionR5 2.19 1.089 0.05402 0.19816
RegionR6 -0.505 1.089 0.99987 1.00000
RegionR7 -0.197 1.089 0.99991 1.00000
RegionR8 -0.153 1.089 0.99992 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.885 1.089 0.99998 1.00000
RegenerationR2 5.537 1.089 0.00014 0.01465
RegenerationR3 2.856 1.089 0.09865 0.50190
RegenerationR4 4.216 1.089 0.01757 0.20800
RegenerationR5 2.878 1.089 0.03755 0.32124
RegenerationR6 2.826 1.089 0.18951 0.52727
RegenerationBL 4.361 1.089 0.05711 0.27707
RegenerationTP 4.255 1.089 0.12350 0.53332


Genes with expression patterns similar to MligTC455_24975

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24975 33 0.7 Mlig455_001679

Neo: -

Age: -

 3 - 1.000 - - 1.000 1.000 Mlig455_001679 {REF} {Length: 1106} {NoTransDecoderORF} {RNA1310_79875}
2. MligTC455_46666 48 1.01 Mlig455_058298

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R2: 5.373/0.02849

Regeneration-enriched R3: 8.854

 HHAT 1.961 - 0.979 - - - 0.982 Mlig455_058298 {REF} {Length: 3155} {Pfam: MBOAT, membrane-bound O-acyltransferase family [PF03062.21, score=77.9]} {Human: ENSG00000280680, HHAT, hedgehog acyltransferase, [Score=126, Expect=1e-30]; ENSG00000054392, HHAT, hedgehog acyltransferase, [Score=126, Expect=1e-30]} {Mouse: ENSMUSG00000037375, Hhat, hedgehog acyltransferase, [Score=134, Expect=8e-34]} {Celegans: WBGene00013312, hhat-2, Homolog of Hedgehog AcylTransferase, [Score=92.8, Expect=8e-20]} {Smed: dd_Smed_v6_17532_0_1, dd_Smed_v6_17532_0_1, [Score=59.3, Expect=3e-09]} {RNA1509_51932} {RNA1310_15625} {RNA815_4453.2}
3. MligTC455_40859 58 1.2 Mlig455_009533

Neo: -

Age: -

 TRIOBP 1.68 - - - - 0.727 0.953 Mlig455_009533 {REF} {Length: 2328} {Human: ENSG00000100106, TRIOBP, TRIO and F-actin binding protein, [Score=58.2, Expect=8e-09]}
4. MligTC455_01297 70 1.46 Mlig455_042285

Neo: -

Age: -

 0.997 - 0.997 - - - - Mlig455_042285 {REF} {Length: 118} {NoTransDecoderORF}
5. MligTC455_01543 6 0.12 Mlig455_043315

Neo: -

Age: -

 0.995 - 0.995 - - - - Mlig455_043315 {REF} {Length: 311}
6. MligTC455_06227 228 4.75 Mlig455_036666, Mlig455_036679

Neo: -

Age: -

 0.995 - 0.995 - - - -

Mlig455_036666 {REF} {Length: 780} {RNA1310_112949}

Mlig455_036679 {REF} {Length: 4100} {RNA1310_79588}
7. MligTC455_32108 22 0.46 Mlig455_008618, Mlig455_056900

Neo: -

Age: -

 0.995 - 0.995 - - - -

Mlig455_008618 {REF} {Length: 3744} {RNA1509_42835} {RNA1310_17405} {RNA815_13146}

Mlig455_056900 {REF} {Length: 1049} {Pfam: RNase H [PF00075.26, score=39.0]} {RNA1509_6898} {RNA1310_269.1} {RNA815_9530.1}
8. MligTC455_14084 59 1.24 Mlig455_012427

Neo: -

Age: -

Region-enriched R1: 9.569/0.02734

 0.994 - 0.994 - - - - Mlig455_012427 {REF} {Length: 626} {Dmel: FBgn0035253, CG7971, [Score=53.9, Expect=3e-08]}
9. MligTC455_31935 299 6.24 Mlig455_046201

Neo: -

Age: -

Region-enriched R1: 6.310/0.00233

 0.994 - 0.994 - - - - Mlig455_046201 {REF} {Length: 1782} {Pfam: RICH domain [PF05062.14, score=19.2]} {RNA1509_2515} {RNA1310_26891} {RNA815_3258.1}
10. MligTC455_09772 568 11.83 Mlig455_007711

Neo: -

Age: -

 0.993 - 0.993 - - - - Mlig455_007711 {REF} {Length: 762} {Pfam: RNase H [PF00075.26, score=32.9]; zinc-binding in reverse transcriptase [PF13966.8, score=20.5]} {RNA1509_42121} {RNA1310_28357.1} {RNA815_28691}
11. MligTC455_48824 535 11.15 Mlig455_021307

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.510

Region-enriched R5: 7.228/0.00001

 0.99 - 0.990 - - - - Mlig455_021307 {REF} {Length: 1933} {RNA1509_1444, RNA1509_3147, RNA1509_34404, RNA1509_3917} {RNA1310_72105, RNA1509_1444, RNA1509_3147, RNA1509_34404, RNA1509_3917} {RNA1509_1444, RNA1509_3147, RNA1509_34404, RNA1509_3917, RNA815_32090}
12. MligTC455_29033 123 2.56 Mlig455_038953

Neo: -

Age: -

 0.987 - 0.987 - - - - Mlig455_038953 {REF} {Length: 196} {NoTransDecoderORF} {RNA1509_34915} {RNA1310_8956.1} {RNA815_41033.1}
13. MligTC455_07851 152 3.16 Mlig455_000950

Neo: -

Age: -

Region-enriched R4: 5.566/0.00142

 0.985 - - - - - 0.985 Mlig455_000950 {REF} {Length: 404} {NoTransDecoderORF}
14. MligTC455_26267 156 3.26 Mlig455_055846

Neo: -

Age: Up-Down-Down

 0.984 - - - - - 0.984 Mlig455_055846 {REF} {Length: 4335} {Pfam: Mucin-like [PF16058.7, score=19.8]} {RNA1509_53350} {RNA1310_5450.1} {RNA815_7717.1}
15. MligTC455_27838 246 5.12 Mlig455_060678

Neo: -

Age: Down-Down-Down

Regeneration-upregulated TP: 4.727

Regeneration-enriched TP: 4.727

 TRPM1 0.983 - - - - - 0.983 Mlig455_060678 {REF} {Length: 14356} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.6]; Ankyrin repeats (3 copies) [PF12796.9, score=80.1]; Ankyrin repeats (many copies) [PF13857.8, score=39.8]; Ankyrin repeat [PF13606.8, score=39.5]; Ankyrin repeat [PF00023.32, score=34.0]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.2, Expect=6e-07]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.2, Expect=5e-07]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=56.2, Expect=4e-07]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=54.3, Expect=1e-06]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=55.8, Expect=4e-07]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=58.2, Expect=6e-08]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=97.1, Expect=4e-20]} {RNA1509_29189} {RNA1310_131.1} {RNA815_52.1}
16. MligTC455_06473 165 3.43 Mlig455_010748

Neo: -

Age: -

 0.982 - - - - - 0.982 Mlig455_010748 {REF} {Length: 1279} {NoTransDecoderORF}
17. MligTC455_13251 89 1.86 Mlig455_005191

Neo: -

Age: logFC(26M/2M)=-0.503

 0.982 - - - - - 0.982 Mlig455_005191 {REF} {Length: 651} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=36.6]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=41.2, Expect=9e-06]} {RNA1509_40279} {RNA1310_35227} {RNA815_50075}
18. MligTC455_47200 213 4.43 Mlig455_023743

Neo: -

Age: -

 0.981 - 0.981 - - - - Mlig455_023743 {REF} {Length: 636} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=25.3]}
19. MligTC455_08796 92 1.91 Mlig455_005779

Neo: -

Age: Up-Down-Up

 0.98 - - - - - 0.980 Mlig455_005779 {REF} {Length: 406} {NoTransDecoderORF} {RNA1509_40279} {RNA1310_35227} {RNA815_50075}
20. MligTC455_10249 19 0.41 Mlig455_012726

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_012726 {REF} {Length: 892} {NoTransDecoderORF} {RNA1509_2860} {RNA1310_58348} {RNA815_55323}
21. MligTC455_17005 1198 24.95 Mlig455_055085

Neo: -

Age: logFC(26M/2M)=-0.672

Region-enriched R5: 5.466/0.00001

 ANK1 0.98 - 0.980 - - - - Mlig455_055085 {REF} {Length: 4336} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13857.8, score=126.0]; Ankyrin repeats (many copies) [PF13637.8, score=116.2]; Ankyrin repeat [PF00023.32, score=98.7]; Ankyrin repeat [PF13606.8, score=89.6]; Mab-21 protein [PF03281.16, score=52.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=129, Expect=3e-29]; ENSG00000151150, ANK3, ankyrin 3, [Score=128, Expect=6e-29]; ENSG00000145362, ANK2, ankyrin 2, [Score=125, Expect=3e-28]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=131, Expect=3e-30]} {Dmel: FBgn0039590, CG10011, [Score=124, Expect=3e-28]} {Celegans: WBGene00015646, mlt-10, [RH, Score=173, Expect=1e-44]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=130, Expect=6e-31]} {RNA1509_56892} {RNA1310_14215} {RNA815_12297}
22. MligTC455_17007 1219 25.39 Mlig455_055131

Neo: -

Age: logFC(26M/2M)=-0.561

Region-enriched R5: 6.753/0.00000

 ANK1 0.979 - 0.979 - - - - Mlig455_055131 {REF} {Length: 3713} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=136.9]; Ankyrin repeats (many copies) [PF13857.8, score=125.1]; Ankyrin repeats (many copies) [PF13637.8, score=113.3]; Ankyrin repeat [PF00023.32, score=94.9]; Ankyrin repeat [PF13606.8, score=87.3]; Mab-21 protein [PF03281.16, score=51.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=137, Expect=3e-32]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=127, Expect=2e-29]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=125, Expect=2e-28]; ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=122, Expect=3e-28]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=122, Expect=1e-27]} {Dmel: FBgn0039590, CG10011, [Score=126, Expect=6e-29]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=113, Expect=4e-25]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=124, Expect=2e-29]} {RNA1509_56892} {RNA1310_14215} {RNA815_12297}
23. MligTC455_54041 1218 25.38 Mlig455_056643

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.517

Region-enriched R5: 7.648/0.00003

 0.978 - 0.978 - - - - Mlig455_056643 {REF} {Length: 179} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_20024} {RNA1310_122974} {RNA815_80.2}
24. MligTC455_17008 1308 27.25 Mlig455_064024

Neo: -

Age: -

Region-enriched R5: 6.717/0.00000

 ANK1 0.974 - 0.974 - - - - Mlig455_064024 {REF} {Length: 760} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13857.8, score=126.0]; Ankyrin repeats (many copies) [PF13637.8, score=116.2]; Ankyrin repeat [PF00023.32, score=98.7]; Ankyrin repeat [PF13606.8, score=89.6]; Mab-21 protein [PF03281.16, score=52.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=129, Expect=3e-29]; ENSG00000151150, ANK3, ankyrin 3, [Score=128, Expect=6e-29]; ENSG00000145362, ANK2, ankyrin 2, [Score=125, Expect=3e-28]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=131, Expect=3e-30]} {Dmel: FBgn0039590, CG10011, [Score=124, Expect=3e-28]} {Celegans: WBGene00015646, mlt-10, [RH, Score=173, Expect=1e-44]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=130, Expect=6e-31]} {RNA1509_29050, RNA1509_4152, RNA1509_5324} {RNA1310_72667.1, RNA1509_29050, RNA1509_5324} {RNA1509_29050, RNA1509_5324, RNA815_5423.1}
25. MligTC455_38185 1903 39.64 Mlig455_021321

Neo: -

Age: logFC(26M/2M)=-0.353

Region-enriched R5: 5.802/0.00000

Regeneration-downregulated R2: -7.443

Regeneration-depleted R2: -7.443

 0.972 - 0.972 - - - - Mlig455_021321 {REF} {Length: 801} {RNA1509_1093, RNA1509_12817, RNA1509_14343, RNA1509_21404, RNA1509_26001, RNA1509_2859, RNA1509_29365, RNA1509_33213, RNA1509_45497} {RNA1310_42010, RNA1509_1093, RNA1509_12817, RNA1509_14343, RNA1509_21404, RNA1509_26001, RNA1509_2859, RNA1509_29365, RNA1509_33213, RNA1509_45497} {RNA1509_1093, RNA1509_12817, RNA1509_14343, RNA1509_21404, RNA1509_26001, RNA1509_2859, RNA1509_29365, RNA1509_33213, RNA1509_45497, RNA815_32090}
26. MligTC455_31620 727 15.14 Mlig455_010746, Mlig455_026255, Mlig455_030076, Mlig455_034157, Mlig455_045792, Mlig455_053595, Mlig455_070973

Neo: -

Age: -

Regeneration-upregulated BL: 4.584

Regeneration-enriched BL: 4.584

 0.97 - - - - - 0.970

Mlig455_010746 {REF} {Length: 603} {Celegans: WBGene00019192, H12I13.3, [Score=83.2, Expect=1e-19]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=44.7, Expect=3e-06]} {RNA1509_39854} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_026255 {REF} {Length: 447} {Celegans: WBGene00016348, C33E10.6, [Score=132, Expect=5e-34]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=113, Expect=6e-28]} {RNA1509_39854} {RNA1310_17473} {RNA815_1342.1}

Mlig455_030076 {REF} {Length: 447} {Celegans: WBGene00016348, C33E10.6, [Score=132, Expect=5e-34]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=113, Expect=6e-28]} {RNA1509_39854} {RNA1310_17473} {RNA815_1342.1}

Mlig455_034157 {REF} {Length: 1056} {Celegans: WBGene00016348, C33E10.6, [Score=132, Expect=5e-34]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=113, Expect=6e-28]} {RNA1509_8946} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_045792 {REF} {Length: 686} {Celegans: WBGene00019192, H12I13.3, [Score=159, Expect=8e-46]} {Smed: dd_Smed_v6_9974_1_9, dd_Smed_v6_9974_1_9, [Score=112, Expect=7e-29]} {RNA1509_50023} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_053595 {REF} {Length: 455} {Celegans: WBGene00019192, H12I13.3, [Score=159, Expect=8e-46]} {Smed: dd_Smed_v6_9974_1_9, dd_Smed_v6_9974_1_9, [Score=112, Expect=7e-29]} {RNA1509_50023} {RNA1310_3396.2} {RNA815_1342.1}

Mlig455_070973 {REF} {Length: 325} {Celegans: WBGene00016348, C33E10.6, [Score=132, Expect=5e-34]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=113, Expect=6e-28]} {RNA1509_39854} {RNA1310_17473} {RNA815_1342.1}
27. MligTC455_30380 58 1.21 Mlig455_068879

Neo: -

Age: -

Region-enriched R2: 5.721/0.03573

 NYNRIN 0.969 - - - - 0.969 - Mlig455_068879 {REF} {Length: 3141} {Pfam: Integrase zinc binding domain [PF17921.3, score=80.4]; Integrase core domain [PF00665.28, score=58.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=122, Expect=9e-29]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [RH, Score=210, Expect=5e-62]} {RNA1509_29299, RNA1509_56565} {RNA1310_1487, RNA1509_56565} {RNA1509_56565, RNA815_7746}
28. MligTC455_38112 144 3 Mlig455_035800, Mlig455_068307

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.078

 0.969 - - - - - 0.969

Mlig455_035800 {REF} {Length: 440} {NoTransDecoderORF}

Mlig455_068307 {REF} {Length: 195} {NoTransDecoderORF}
29. MligTC455_07285 48 1 Mlig455_045441

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_045441 {REF} {Length: 504} {NoTransDecoderORF}
30. MligTC455_48715 129 2.7 Mlig455_015244

Neo: -

Age: logFC(26M/2M)=-0.557

 0.968 - - - - - 0.968 Mlig455_015244 {REF} {Length: 1838} {RNA1509_39666} {RNA1310_16691.2, RNA1509_39666} {RNA1509_39666, RNA815_18464}
31. MligTC455_17010 1661 34.6 Mlig455_064025

Neo: -

Age: logFC(26M/2M)=-0.608

Region-enriched R5: 6.695/0.00000

Regeneration-downregulated R2: -8.945

Regeneration-depleted R2: -8.945

 0.967 - 0.967 - - - - Mlig455_064025 {REF} {Length: 465} {RNA1509_29243} {RNA1310_89627} {RNA815_5423.3}
32. MligTC455_11889 66 1.37 Mlig455_040154

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_040154 {REF} {Length: 1508} {RNA1509_18432} {RNA1310_134295} {RNA815_29071}
33. MligTC455_17004 1478 30.79 Mlig455_055086

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.861

Region-enriched R5: 5.591/0.00169
Region-enriched R2: 4.869/0.01201

Regeneration-downregulated R5: -9.308

Regeneration-depleted R5: -9.308

 0.965 - 0.965 - - - - Mlig455_055086 {REF} {Length: 437} {RNA1509_5324} {RNA1310_89627} {RNA815_5423.3}
34. MligTC455_19925 2523 52.56 Mlig455_042140, Mlig455_065838

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.311

Region-enriched R5: 4.776/0.00396

Regeneration-downregulated R5: -10.657

Regeneration-depleted R5: -10.657

 0.965 - 0.965 - - - -

Mlig455_042140 {REF} {Length: 513} {RNA1509_2632, RNA1509_3473} {RNA1310_66502.1, RNA1509_2632, RNA1509_3473} {RNA1509_2632, RNA1509_3473, RNA815_40213}

Mlig455_065838 {REF} {Length: 440} {NoTransDecoderORF} {RNA1509_3473, RNA1509_36382} {RNA1310_66502.1, RNA1509_36382} {RNA1509_36382, RNA815_40213}
35. MligTC455_28134 273 5.69 Mlig455_011879, Mlig455_035312, Mlig455_044424

Neo: -

Age: -

Regeneration-upregulated BL: 3.772

Regeneration-enriched BL: 3.772

 0.965 - - - - - 0.965

Mlig455_011879 {REF} {Length: 800} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_34613}

Mlig455_035312 {REF} {Length: 554} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_77645} {RNA815_26110}

Mlig455_044424 {REF} {Length: 823} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_34613}
36. MligTC455_26081 253 5.27 Mlig455_006766, Mlig455_048559

Neo: -

Age: -

 0.964 - - - - - 0.964

Mlig455_006766 {REF} {Length: 1897} {RNA1509_9219} {RNA1310_468} {RNA815_355.1}

Mlig455_048559 {REF} {Length: 804} {Pfam: Phage antitermination protein Q [PF06323.13, score=19.1]} {RNA1509_9219} {RNA1310_468} {RNA815_355.1}
37. MligTC455_28313 86 1.79 Mlig455_046339

Neo: -

Age: -

 0.964 - 0.964 - - - - Mlig455_046339 {REF} {Length: 636} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=70.9, Expect=3e-14]} {RNA1310_66537}
38. MligTC455_33647 110 2.29 Mlig455_042597, Mlig455_042610, Mlig455_042641

Neo: -

Age: -

 0.964 - 0.964 - - - -

Mlig455_042597 {REF} {Length: 3620} {Dmel: FBgn0263993, CG43736, [RH, Score=83.6, Expect=5e-16]} {RNA1509_3896} {RNA1310_1327} {RNA815_6275}

Mlig455_042610 {REF} {Length: 3340} {Dmel: FBgn0263993, CG43736, [RH, Score=83.6, Expect=4e-16]} {RNA1509_57541} {RNA1310_1327} {RNA815_6275}

Mlig455_042641 {REF} {Length: 5491} {Dmel: FBgn0263993, CG43736, [RH, Score=83.6, Expect=5e-16]} {RNA1509_3896} {RNA1310_1327} {RNA815_2293.1}
39. MligTC455_27854 108 2.26 Mlig455_038475

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_038475 {REF} {Length: 2901} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
40. MligTC455_14580 159 3.32 Mlig455_030626, Mlig455_030698, Mlig455_031017

Neo: -

Age: logFC(26M/2M)=-0.809

Region-enriched R2: 3.469/0.03212

 0.962 - - - - - 0.962

Mlig455_030626 {REF} {Length: 2569} {RNA1509_58943} {RNA1310_27039, RNA1509_58943} {RNA1509_58943, RNA815_16088}

Mlig455_030698 {REF} {Length: 907} {RNA1509_39929} {RNA1310_27230} {RNA815_16088}

Mlig455_031017 {REF} {Length: 1218} {RNA1509_39929} {RNA1310_27230} {RNA815_16088}
41. MligTC455_46981 101 2.1 Mlig455_062942

Neo: Irradiation

Age: -

 0.962 - - - - - 0.962 Mlig455_062942 {REF} {Length: 3829} {RNA1310_30596.1} {RNA815_27253}
42. MligTC455_19316 221 4.6 Mlig455_050415

Neo: Irradiation

Age: -

 ZNF626 0.96 - - - - 0.960 - Mlig455_050415 {REF} {Length: 3403} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=68.5]; Zinc-finger double domain [PF13465.8, score=68.0]; C2H2-type zinc finger [PF13894.8, score=56.1]; C2H2-type zinc finger [PF13912.8, score=36.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=26.1]; Zinc ribbon domain [PF09723.12, score=25.6]; Transposase zinc-ribbon domain [PF12760.9, score=22.3]; Zic proteins zinc finger domain [PF18366.3, score=19.2]} {Human: ENSG00000188171, ZNF626, zinc finger protein 626, [Score=122, Expect=9e-30]} {Mouse: ENSMUSG00000092416, Zfp141, zinc finger protein 141, [Score=112, Expect=4e-26]; ENSMUSG00000074863, Platr25, pluripotency associated transcript 25, [Score=110, Expect=8e-26]; ENSMUSG00000054715, Zscan22, zinc finger and SCAN domain containing 22, [Score=110, Expect=9e-26]; ENSMUSG00000091183, Gm5141, predicted gene 5141, [Score=108, Expect=5e-25]; ENSMUSG00000069476, Zfp616, zinc finger protein 616, [Score=108, Expect=1e-24]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=107, Expect=1e-24]; ENSMUSG00000030757, Zkscan2, zinc finger with KRAB and SCAN domains 2, [Score=107, Expect=3e-24]; ENSMUSG00000045639, Zfp629, zinc finger protein 629, [Score=107, Expect=3e-24]} {Dmel: FBgn0004618, gl, glass, [Score=112, Expect=2e-26]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=97.8, Expect=2e-23]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=99.4, Expect=5e-23]} {RNA1509_16295, RNA1509_53463} {RNA1310_10064, RNA1509_16295, RNA1509_53463} {RNA1509_16295, RNA1509_53463, RNA815_10615}
43. MligTC455_22585 1831 38.14 Mlig455_037932

Neo: -

Age: logFC(26M/2M)=-0.330

Region-enriched R5: 6.325/0.00001

 0.96 - 0.960 - - - - Mlig455_037932 {REF} {Length: 512} {RNA1509_10443, RNA1509_1359, RNA1509_2019, RNA1509_22108, RNA1509_48351, RNA1509_54687, RNA1509_5787, RNA1509_940} {RNA1310_81873.1, RNA1509_10443, RNA1509_1359, RNA1509_2019, RNA1509_22108, RNA1509_48351, RNA1509_54687, RNA1509_5787, RNA1509_940} {RNA1509_10443, RNA1509_1359, RNA1509_2019, RNA1509_22108, RNA1509_48351, RNA1509_54687, RNA1509_5787, RNA1509_940, RNA815_41075}
44. MligTC455_26285 1067 22.23 Mlig455_041966

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.613

Regeneration-enriched TP: 3.474
Regeneration-enriched BL: 3.163

 KLF18 0.96 - - - - - 0.960 Mlig455_041966 {REF} {Length: 15412} {Human: ENSG00000283039, KLF18, Kruppel like factor 18, [Score=83.2, Expect=1e-15]} {Dmel: FBgn0003374, Sgs4, Salivary gland secretion 4, [Score=79.0, Expect=1e-15]} {RNA1509_56304} {RNA1310_9089.1} {RNA815_7548.2}
45. MligTC455_31866 621 12.93 Mlig455_023217, Mlig455_045753

Neo: -

Age: logFC(26M/2M)=0.454

Region-enriched R4: 4.034/0.04838

Regeneration-upregulated BL: 5.711

Regeneration-enriched BL: 5.711

 0.96 - - - - - 0.960

Mlig455_023217 {REF} {Length: 4980} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=31.5]} {RNA1509_12420} {RNA1310_5450.1} {RNA815_7136.1}

Mlig455_045753 {REF} {Length: 5962} {Pfam: Lectin C-type domain [PF00059.23, score=30.9]} {Smed: dd_Smed_v6_32483_0_1, dd_Smed_v6_32483_0_1, [Score=58.5, Expect=3e-10]} {RNA1509_22651, RNA1509_44006} {RNA1310_622.1, RNA1509_44006} {RNA1509_44006, RNA815_2514.1}
46. MligTC455_52295 166 3.46 Mlig455_051932

Neo: -

Age: -

 UBXN11 0.96 - - - - - 0.960 Mlig455_051932 {REF} {Length: 2427} {TRANSSPLICED} {Pfam: SEP domain [PF08059.15, score=57.2]} {Human: ENSG00000158062, UBXN11, UBX domain protein 11, [RH, Score=181, Expect=2e-50]} {Mouse: ENSMUSG00000012126, Ubxn11, UBX domain protein 11, [RH, Score=176, Expect=2e-48]} {Smed: dd_Smed_v6_14940_0_1, dd_Smed_v6_14940_0_1, [RH, Score=202, Expect=3e-58]} {RNA1509_36469, RNA1509_58590} {RNA1310_9386.1, RNA1509_58590} {RNA1509_58590, RNA815_3103}
47. MligTC455_13168 123 2.56 Mlig455_022212

Neo: -

Age: -

 0.958 - 0.958 - - - - Mlig455_022212 {REF} {Length: 1351} {RNA1509_11839} {RNA1310_32564} {RNA815_15273}
48. MligTC455_44883 146 3.04 Mlig455_045714

Neo: -

Age: Up-Down-Down

Region-enriched R2: 3.068/0.02935

 OGFR 0.958 - - - - - 0.958 Mlig455_045714 {REF} {Length: 5397} {Pfam: PT repeat [PF04886.14, score=183.6]} {Human: ENSG00000060491, OGFR, opioid growth factor receptor, [Score=75.1, Expect=7e-13]} {Mouse: ENSMUSG00000053198, Prx, periaxin, [RH, Score=56.2, Expect=4e-07]} {Dmel: FBgn0029807, CG3108, [Score=96.3, Expect=2e-19]} {Smed: dd_Smed_v6_5981_0_1, dd_Smed_v6_5981_0_1, [Score=50.8, Expect=2e-06]} {RNA1509_58926} {RNA1310_37131} {RNA815_16145}
49. MligTC455_51744 87 1.82 Mlig455_008026

Neo: -

Age: -

 FOXJ3 0.958 - - - - 0.958 - Mlig455_008026 {REF} {Length: 3805} {Pfam: Forkhead domain [PF00250.20, score=126.3]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [RH, Score=165, Expect=3e-46]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [RH, Score=163, Expect=4e-44]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=118, Expect=8e-29]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=115, Expect=4e-29]} {Smed: dd_Smed_v6_12170_0_1, dd_Smed_v6_12170_0_1, [RH, Score=112, Expect=2e-26]} {RNA1509_19637} {RNA1310_12207} {RNA815_17037}
50. MligTC455_08974 45 0.95 Mlig455_031614

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_031614 {REF} {Length: 1585} {NoTransDecoderORF} {RNA1310_143211}
51. MligTC455_15889 141 2.94 Mlig455_015213, Mlig455_027172

Neo: -

Age: -

 0.957 - - - - - 0.957

Mlig455_015213 {REF} {Length: 700} {NoTransDecoderORF}

Mlig455_027172 {REF} {Length: 1153} {NoTransDecoderORF} {RNA1509_14015} {RNA1310_27437} {RNA815_11483.1}
52. MligTC455_33582 299 6.23 Mlig455_040259, Mlig455_040260, Mlig455_040261

Neo: Germline

Age: Up-Up-Down, logFC(26M/2M)=0.526

Region-specific R4: 3.911

 0.957 - - - - 0.957 -

Mlig455_040259 {REF} {Length: 2395} {TRANSSPLICED} {Smed: dd_Smed_v6_12004_0_1, dd_Smed_v6_12004_0_1, [RH, Score=103, Expect=1e-26]} {RNA1509_20529} {RNA1310_30668} {RNA815_15892.1}

Mlig455_040260 {REF} {Length: 2116} {TRANSSPLICED} {Smed: dd_Smed_v6_12004_0_1, dd_Smed_v6_12004_0_1, [RH, Score=104, Expect=7e-27]} {RNA1509_20529} {RNA1310_31649} {RNA815_15892.1}

Mlig455_040261 {REF} {Length: 2116} {TRANSSPLICED} {Smed: dd_Smed_v6_12004_0_1, dd_Smed_v6_12004_0_1, [RH, Score=104, Expect=7e-27]} {RNA1509_20529} {RNA1310_31649, RNA1509_20529} {RNA1509_20529, RNA815_15892.1}
53. MligTC455_39724 59 1.22 Mlig455_026218

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_026218 {REF} {Length: 448} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_87210} {RNA815_14978}
54. MligTC455_01194 16 0.34 Mlig455_056618

Neo: -

Age: -

Regeneration-upregulated R2: 6.004

Regeneration-enriched R2: 6.004

 0.955 - - - - - 0.955 Mlig455_056618 {REF} {Length: 554} {NoTransDecoderORF} {RNA1310_138054}
55. MligTC455_07246 45 0.93 Mlig455_067474

Neo: -

Age: -

 SON 0.955 - - - - - 0.955 Mlig455_067474 {REF} {Length: 977} {Human: ENSG00000159140, SON, SON DNA binding protein, [Score=58.9, Expect=6e-10]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [Score=59.3, Expect=3e-10]} {RNA1310_117140}
56. MligTC455_18160 199 4.14 Mlig455_005036, Mlig455_005076, Mlig455_005237

Neo: -

Age: logFC(26M/2M)=0.400

 MARCH7 0.955 - - - - 0.955 -

Mlig455_005036 {REF} {Length: 1948} {Pfam: RING-variant domain [PF12906.9, score=51.3]} {Human: ENSG00000136536, MARCH7, membrane associated ring-CH-type finger 7, [Score=52.4, Expect=9e-08]} {Mouse: ENSMUSG00000026977, March7, membrane-associated ring finger (C3HC4) 7, [Score=52.8, Expect=6e-08]} {Dmel: FBgn0031474, CG2991, [Score=47.8, Expect=2e-06]} {Celegans: WBGene00016903, marc-4, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=58.2, Expect=2e-10]} {Smed: dd_Smed_v6_7654_0_1, dd_Smed_v6_7654_0_1, [Score=51.6, Expect=5e-08]} {RNA1509_48933} {RNA1310_49370} {RNA815_36043}

Mlig455_005076 {REF} {Length: 1947} {Pfam: RING-variant domain [PF12906.9, score=49.8]} {Human: ENSG00000136536, MARCH7, membrane associated ring-CH-type finger 7, [Score=50.8, Expect=3e-07]} {Mouse: ENSMUSG00000026977, March7, membrane-associated ring finger (C3HC4) 7, [Score=51.2, Expect=2e-07]} {Dmel: FBgn0031474, CG2991, [Score=46.6, Expect=4e-06]} {Celegans: WBGene00016903, marc-4, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=57.4, Expect=4e-10]} {Smed: dd_Smed_v6_7654_0_1, dd_Smed_v6_7654_0_1, [Score=52.0, Expect=4e-08]} {RNA1509_48933} {RNA1310_49370} {RNA815_36043}

Mlig455_005237 {REF} {Length: 1944} {Pfam: RING-variant domain [PF12906.9, score=50.7]} {Human: ENSG00000136536, MARCH7, membrane associated ring-CH-type finger 7, [Score=51.2, Expect=3e-07]} {Mouse: ENSMUSG00000026977, March7, membrane-associated ring finger (C3HC4) 7, [Score=51.2, Expect=2e-07]} {Dmel: FBgn0031474, CG2991, [Score=47.0, Expect=3e-06]} {Celegans: WBGene00016903, marc-4, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=57.0, Expect=5e-10]} {Smed: dd_Smed_v6_7654_0_1, dd_Smed_v6_7654_0_1, [Score=50.1, Expect=1e-07]} {RNA1509_48933} {RNA1310_49370} {RNA815_36043}
57. MligTC455_30756 66 1.36 Mlig455_031771, Mlig455_054714

Neo: -

Age: logFC(26M/2M)=-0.696

 ANK1 0.955 - - - - 0.955 -

Mlig455_031771 {REF} {Length: 3793} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=184.4]; Ankyrin repeat [PF00023.32, score=135.6]; Ankyrin repeats (many copies) [PF13637.8, score=126.2]; Ankyrin repeat [PF13606.8, score=121.3]; Ankyrin repeats (many copies) [PF13857.8, score=105.1]; Mab-21 protein [PF03281.16, score=32.0]; Nucleoplasmin/nucleophosmin domain [PF03066.17, score=19.9]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=155, Expect=1e-37]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=159, Expect=2e-39]} {Dmel: FBgn0031473, CG3104, [Score=156, Expect=7e-42]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=150, Expect=1e-36]} {Smed: dd_Smed_v6_2072_0_20, dd_Smed_v6_2072_0_20, [Score=147, Expect=1e-35]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}

Mlig455_054714 {REF} {Length: 4487} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=443.9]; Ankyrin repeat [PF00023.32, score=286.8]; Ankyrin repeats (many copies) [PF13637.8, score=245.9]; Ankyrin repeats (many copies) [PF13857.8, score=223.5]; Ankyrin repeat [PF13606.8, score=222.5]; Glutamine amidotransferase domain [PF13537.8, score=32.6]; Mab-21 protein [PF03281.16, score=31.6]; PEGA domain [PF08308.13, score=26.0]; Nucleoplasmin/nucleophosmin domain [PF03066.17, score=23.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=265, Expect=7e-72]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=257, Expect=2e-69]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=248, Expect=3e-66]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=237, Expect=3e-67]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=258, Expect=4e-70]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=255, Expect=4e-69]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
58. MligTC455_29067 766 15.96 Mlig455_052924, Mlig455_062051

Neo: -

Age: -

 0.954 - - - - - 0.954

Mlig455_052924 {REF} {Length: 5034} {Pfam: PHD-finger [PF00628.31, score=24.4]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=22.7]; PHD - plant homeodomain finger protein [PF07227.13, score=19.7]} {RNA1509_29353} {RNA1310_4523} {RNA815_17419}

Mlig455_062051 {REF} {Length: 5910} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=82.0]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=94.4, Expect=3e-21]} {RNA1509_23986} {RNA1310_4523} {RNA815_17419}
59. MligTC455_54117 68 1.41 Mlig455_035190

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_035190 {REF} {Length: 2042} {Pfam: WSC domain [PF01822.21, score=51.2]; PAN domain [PF00024.28, score=28.9]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=47.4, Expect=8e-06]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=51.6, Expect=2e-07]} {RNA1509_45595} {RNA1310_44717} {RNA815_32019}
60. MligTC455_57726 39 0.82 Mlig455_030142

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_030142 {REF} {Length: 234} {NoTransDecoderORF} {RNA1310_117714}
61. MligTC455_17009 1195 24.89 Mlig455_055132

Neo: -

Age: Up-Down-Up

Region-enriched R5: 7.576/0.00000

 ANK1 0.952 - 0.952 - - - - Mlig455_055132 {REF} {Length: 618} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13857.8, score=126.0]; Ankyrin repeats (many copies) [PF13637.8, score=116.2]; Ankyrin repeat [PF00023.32, score=98.7]; Ankyrin repeat [PF13606.8, score=89.6]; Mab-21 protein [PF03281.16, score=52.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=129, Expect=3e-29]; ENSG00000151150, ANK3, ankyrin 3, [Score=128, Expect=6e-29]; ENSG00000145362, ANK2, ankyrin 2, [Score=125, Expect=3e-28]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=131, Expect=3e-30]} {Dmel: FBgn0039590, CG10011, [Score=124, Expect=3e-28]} {Celegans: WBGene00015646, mlt-10, [RH, Score=173, Expect=1e-44]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=130, Expect=6e-31]} {RNA1509_29243, RNA1509_5324} {RNA1310_89627, RNA1509_29243} {RNA1509_29243, RNA815_5423.3}
62. MligTC455_35008 283 5.89 Mlig455_067943

Neo: -

Age: -

 MAPK7 0.951 - - - - 0.951 - Mlig455_067943 {REF} {Length: 4027} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=208.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=103.1]} {Human: ENSG00000166484, MAPK7, mitogen-activated protein kinase 7, [RH, Score=345, Expect=2e-106]} {Mouse: ENSMUSG00000001034, Mapk7, mitogen-activated protein kinase 7, [RH, Score=343, Expect=4e-106]} {Dmel: FBgn0003256, rl, rolled, [Score=278, Expect=1e-86]} {Celegans: WBGene00003402, mpk-2, Mitogen-activated protein kinase, [RH, Score=321, Expect=3e-102]} {Smed: dd_Smed_v6_4300_0_1, dd_Smed_v6_4300_0_1, [RH, Score=314, Expect=4e-97]} {RNA1509_27430, RNA1509_51899} {RNA1310_6095.1, RNA1509_27430, RNA1509_51899} {RNA1509_27430, RNA1509_51899, RNA815_12423}
63. MligTC455_38086 3876 80.76 Mlig455_044474, Mlig455_046754

Neo: -

Age: Up-Down-Up

Region-enriched R1: 3.659/0.00863

 ZNF347 0.95 - 0.950 - - - -

Mlig455_044474 {REF} {Length: 431} {Pfam: C2H2-type zinc finger [PF13894.8, score=25.7]} {RNA1509_7797} {RNA1310_1145} {RNA815_22627}

Mlig455_046754 {REF} {Length: 5818} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=86.8]; C2H2-type zinc finger [PF13894.8, score=73.9]; C2H2-type zinc finger [PF13912.8, score=39.9]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=24.3]} {Human: ENSG00000197937, ZNF347, zinc finger protein 347, [Score=81.3, Expect=8e-15]} {Mouse: ENSMUSG00000034538, Zfp418, zinc finger protein 418, [Score=72.8, Expect=2e-12]; ENSMUSG00000037640, Zfp60, zinc finger protein 60, [Score=70.9, Expect=8e-12]; ENSMUSG00000058883, Zfp708, zinc finger protein 708, [Score=70.5, Expect=8e-12]} {Dmel: FBgn0028647, CG11902, [Score=57.8, Expect=7e-08]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=53.1, Expect=1e-06]} {RNA1509_7797} {RNA1310_1145} {RNA815_319.1}
64. MligTC455_38608 87 1.8 Mlig455_035941

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_035941 {REF} {Length: 2109} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=161.7]; Endonuclease-reverse transcriptase [PF14529.8, score=51.0]; RNase H [PF00075.26, score=49.2]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=27.2]; zinc-binding in reverse transcriptase [PF13966.8, score=20.0]} {Celegans: WBGene00022888, rnh-1.1, RNase H, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_13734_0_18, dd_Smed_v6_13734_0_18, [Score=73.2, Expect=3e-13]} {RNA1509_42121} {RNA1310_28357.1} {RNA815_28165.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA