Data search
Results for MligTC455_46672
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46672 | 938 | 19.55 | Mlig455_012928, Mlig455_039835 | Neo: - Age: logFC(26M/2M)=0.241 |
ELAVL1 | Mlig455_012928 {REF} {Length: 2726} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=93.8]; RNA recognition motif [PF16367.7, score=19.4]} {Human: ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=122, Expect=3e-32]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=117, Expect=2e-30]} {Mouse: ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=120, Expect=2e-31]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=117, Expect=2e-30]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=116, Expect=6e-31]} {Dmel: FBgn0264270, Sxl, Sex lethal, [Score=117, Expect=2e-30]} {Celegans: WBGene00001368, exc-7, [Score=104, Expect=2e-25]} {Smed: dd_Smed_v6_11311_0_1, dd_Smed_v6_11311_0_1, [Score=100, Expect=5e-26]} {RNA1509_27115, RNA1509_52329} {RNA1310_32659, RNA1509_52329} {RNA1509_52329, RNA815_26376} Mlig455_039835 {REF} {Length: 2317} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=93.8]; RNA recognition motif [PF16367.7, score=19.2]} {Human: ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=122, Expect=3e-32]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=118, Expect=2e-30]} {Mouse: ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=120, Expect=2e-31]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=118, Expect=1e-30]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=116, Expect=7e-31]} {Dmel: FBgn0264270, Sxl, Sex lethal, [Score=117, Expect=2e-30]} {Celegans: WBGene00001368, exc-7, [Score=105, Expect=1e-25]} {Smed: dd_Smed_v6_11311_0_1, dd_Smed_v6_11311_0_1, [Score=100, Expect=4e-26]} {RNA1509_27115, RNA1509_33870, RNA1509_34181} {RNA1310_32659, RNA1509_27115, RNA1509_33870, RNA1509_34181} {RNA1509_27115, RNA1509_33870, RNA1509_34181, RNA815_26376} |
Cumulative graph for MligTC455_46672
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.454 | 4.619 | 0.30626 | 0.95509 | |
| RegionR2 | -0.213 | 4.619 | 0.73142 | 1.00000 | |
| RegionR3 | -0.473 | 4.619 | 0.35006 | 0.88530 | |
| RegionR4 | 0.685 | 4.619 | 0.23200 | 0.52560 | |
| RegionR5 | 0.62 | 4.619 | 0.15962 | 0.42024 | |
| RegionR6 | -0.221 | 4.619 | 0.65578 | 1.00000 | |
| RegionR7 | -0.029 | 4.619 | 0.95937 | 1.00000 | |
| RegionR8 | 1.085 | 4.619 | 0.05873 | 0.47367 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.24 | 4.619 | 0.34259 | 1.00000 | |
| RegenerationR2 | 0.274 | 4.619 | 0.59448 | 0.91315 | |
| RegenerationR3 | 0.046 | 4.619 | 0.93986 | 1.00000 | |
| RegenerationR4 | -0.551 | 4.619 | 0.36100 | 0.78797 | |
| RegenerationR5 | 0.241 | 4.619 | 0.65145 | 0.93296 | |
| RegenerationR6 | -0.301 | 4.619 | 0.60771 | 0.87275 | |
| RegenerationBL | 0.251 | 4.619 | 0.64810 | 0.98532 | |
| RegenerationTP | -0.625 | 4.619 | 0.33854 | 0.78216 |
Genes with expression patterns similar to MligTC455_46672
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46672 | 938 | 19.55 | Mlig455_012928, Mlig455_039835 | Neo: - Age: logFC(26M/2M)=0.241 |
ELAVL1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012928 {REF} {Length: 2726} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=93.8]; RNA recognition motif [PF16367.7, score=19.4]} {Human: ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=122, Expect=3e-32]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=117, Expect=2e-30]} {Mouse: ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=120, Expect=2e-31]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=117, Expect=2e-30]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=116, Expect=6e-31]} {Dmel: FBgn0264270, Sxl, Sex lethal, [Score=117, Expect=2e-30]} {Celegans: WBGene00001368, exc-7, [Score=104, Expect=2e-25]} {Smed: dd_Smed_v6_11311_0_1, dd_Smed_v6_11311_0_1, [Score=100, Expect=5e-26]} {RNA1509_27115, RNA1509_52329} {RNA1310_32659, RNA1509_52329} {RNA1509_52329, RNA815_26376} Mlig455_039835 {REF} {Length: 2317} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=93.8]; RNA recognition motif [PF16367.7, score=19.2]} {Human: ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=122, Expect=3e-32]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=118, Expect=2e-30]} {Mouse: ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=120, Expect=2e-31]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=118, Expect=1e-30]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=116, Expect=7e-31]} {Dmel: FBgn0264270, Sxl, Sex lethal, [Score=117, Expect=2e-30]} {Celegans: WBGene00001368, exc-7, [Score=105, Expect=1e-25]} {Smed: dd_Smed_v6_11311_0_1, dd_Smed_v6_11311_0_1, [Score=100, Expect=4e-26]} {RNA1509_27115, RNA1509_33870, RNA1509_34181} {RNA1310_32659, RNA1509_27115, RNA1509_33870, RNA1509_34181} {RNA1509_27115, RNA1509_33870, RNA1509_34181, RNA815_26376} |
| 2. | MligTC455_41804 | 1219 | 25.39 | Mlig455_001657, Mlig455_050107 | Neo: - Age: - |
TBL1XR1 | 2.556 | - | - | 0.724 | 0.882 | - | 0.950 | Mlig455_001657 {REF} {Length: 1216} {RNA1509_35536} {RNA1310_48446.1, RNA1509_35536} {RNA1509_35536, RNA815_1670} Mlig455_050107 {REF} {Length: 3364} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=158.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=104.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=41.5]; LisH [PF08513.13, score=24.5]; Coatomer WD associated region [PF04053.16, score=22.5]} {Human: ENSG00000177565, TBL1XR1, transducin beta like 1 X-linked receptor 1, [RH, Score=684, Expect=0.0]; ENSG00000101849, TBL1X, transducin beta like 1 X-linked, [RH, Score=679, Expect=0.0]; ENSG00000092377, TBL1Y, transducin beta like 1 Y-linked, [RH, Score=673, Expect=0.0]} {Mouse: ENSMUSG00000027630, Tbl1xr1, transducin (beta)-like 1X-linked receptor 1, [RH, Score=692, Expect=0.0]; ENSMUSG00000025246, Tbl1x, transducin (beta)-like 1 X-linked, [RH, Score=677, Expect=0.0]} {Dmel: FBgn0263933, ebi, [RH, Score=568, Expect=0.0]} {Celegans: WBGene00021074, W07E6.2, [Score=109, Expect=2e-25]} {Smed: dd_Smed_v6_3247_0_1, dd_Smed_v6_3247_0_1, [RH, Score=519, Expect=1e-180]} {RNA1509_10901} {RNA1310_6496.1, RNA1509_10901} {RNA1509_10901, RNA815_1670} |
| 3. | MligTC455_29218 | 744 | 15.49 | Mlig455_032479 | Neo: - Age: - |
ARRB1 | 1.749 | 0.796 | - | - | - | - | 0.953 | Mlig455_032479 {REF} {Length: 3554} {TRANSSPLICED} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=110.5]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=82.8]} {Human: ENSG00000137486, ARRB1, arrestin beta 1, [RH, Score=498, Expect=8e-175]; ENSG00000141480, ARRB2, arrestin beta 2, [RH, Score=491, Expect=4e-172]} {Mouse: ENSMUSG00000018909, Arrb1, arrestin, beta 1, [RH, Score=497, Expect=2e-174]; ENSMUSG00000060216, Arrb2, arrestin, beta 2, [RH, Score=490, Expect=9e-172]} {Dmel: FBgn0040206, krz, kurtz, [RH, Score=503, Expect=4e-176]} {Celegans: WBGene00000195, arr-1, Probable beta-arrestin, [RH, Score=489, Expect=1e-171]} {Smed: dd_Smed_v6_5512_0_2, dd_Smed_v6_5512_0_2, [RH, Score=609, Expect=0.0]} {RNA1509_53235, RNA1509_5422} {RNA1310_12451, RNA1509_53235, RNA1509_5422} {RNA1509_53235, RNA1509_5422, RNA815_5506} |
| 4. | MligTC455_40836 | 415 | 8.64 | Mlig455_027530 | Neo: - Age: - |
HS2ST1 | 1.722 | - | - | - | 0.761 | - | 0.961 | Mlig455_027530 {REF} {Length: 3355} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF03567.16, score=110.3]; Galactose-3-O-sulfotransferase [PF06990.13, score=18.8]} {Human: ENSG00000153936, HS2ST1, heparan sulfate 2-O-sulfotransferase 1, [RH, Score=347, Expect=2e-117]} {Mouse: ENSMUSG00000040151, Hs2st1, heparan sulfate 2-O-sulfotransferase 1, [RH, Score=345, Expect=6e-117]} {Dmel: FBgn0024230, Hs2st, Heparan sulfate 2-O-sulfotransferase, [RH, Score=332, Expect=6e-112]} {Celegans: WBGene00002029, hst-2, Heparan sulfate 2-O-sulfotransferase hst-2, [RH, Score=257, Expect=3e-83]} {Smed: dd_Smed_v6_6699_0_1, dd_Smed_v6_6699_0_1, [RH, Score=293, Expect=1e-97]} {RNA1509_17362} {RNA1310_14267.1} {RNA815_6989.1} |
| 5. | MligTC455_38751 | 286 | 5.97 | Mlig455_041346 | Neo: Germline Age: - |
AP3M1 | 1.689 | - | - | 0.726 | - | - | 0.963 | Mlig455_041346 {REF} {Length: 2725} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=210.9]; Clathrin adaptor complex small chain [PF01217.22, score=41.7]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [RH, Score=531, Expect=0.0]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [RH, Score=530, Expect=0.0]} {Dmel: FBgn0000330, cm, carmine, [RH, Score=503, Expect=5e-178]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [RH, Score=481, Expect=3e-169]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [Score=447, Expect=2e-156]} {RNA1509_42193} {RNA1310_18368} {RNA815_13395} |
| 6. | MligTC455_49233 | 685 | 14.27 | Mlig455_069309 | Neo: Irradiation Age: Up-Up-Down |
PRKAG1 | 1.675 | 0.720 | - | - | - | - | 0.955 | Mlig455_069309 {REF} {Length: 4161} {Pfam: CBS domain [PF00571.30, score=40.6]} {Human: ENSG00000181929, PRKAG1, protein kinase AMP-activated non-catalytic subunit gamma 1, [Score=251, Expect=1e-76]; ENSG00000106617, PRKAG2, protein kinase AMP-activated non-catalytic subunit gamma 2, [Score=248, Expect=8e-73]} {Mouse: ENSMUSG00000067713, Prkag1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit, [Score=251, Expect=1e-76]; ENSMUSG00000028944, Prkag2, protein kinase, AMP-activated, gamma 2 non-catalytic subunit, [Score=247, Expect=2e-72]} {Dmel: FBgn0264357, SNF4Agamma, SNF4/AMP-activated protein kinase gamma subunit, [Score=276, Expect=7e-83]} {Celegans: WBGene00013732, aakg-1, AMP-Activated protein Kinase Gamma subunit, [Score=220, Expect=1e-63]} {Smed: dd_Smed_v6_4877_0_1, dd_Smed_v6_4877_0_1, [Score=205, Expect=2e-59]} {RNA1509_13211} {RNA1310_6732.1, RNA1509_13211} {RNA1509_13211, RNA815_8244.1} |
| 7. | MligTC455_48833 | 702 | 14.62 | Mlig455_006923, Mlig455_017937 | Neo: - Age: - Region-enriched R5: 1.677/0.02053 |
RNF2 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_006923 {REF} {Length: 2956} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990, RNA1509_26957} {RNA1509_26957, RNA815_16348} Mlig455_017937 {REF} {Length: 2921} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990} {RNA815_16348} |
| 8. | MligTC455_43612 | 529 | 11.02 | Mlig455_041699 | Neo: - Age: - Region-enriched R4: 2.004/0.02294 |
ZMYND8 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_041699 {REF} {Length: 4769} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=57.7]; PWWP domain [PF00855.19, score=20.9]; MYND finger [PF01753.20, score=19.3]} {Human: ENSG00000101040, ZMYND8, zinc finger MYND-type containing 8, [RH, Score=177, Expect=6e-45]} {Mouse: ENSMUSG00000039671, Zmynd8, zinc finger, MYND-type containing 8, [RH, Score=180, Expect=4e-46]} {Dmel: FBgn0039863, CG1815, [RH, Score=135, Expect=7e-32]} {Celegans: WBGene00000262, bra-1, BMP Receptor Associated protein family, [Score=72.4, Expect=3e-14]} {Smed: dd_Smed_v6_8799_0_1, dd_Smed_v6_8799_0_1, [RH, Score=144, Expect=2e-35]} {RNA1509_7947} {RNA1310_6002.1} {RNA815_2797} |
| 9. | MligTC455_53874 | 1547 | 32.22 | Mlig455_004224, Mlig455_031048, Mlig455_031055 | Neo: Int S/G2/M Age: - |
ATP6V0B | 0.951 | - | - | - | - | - | 0.951 | Mlig455_004224 {REF} {Length: 1362} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=88.3]} {Human: ENSG00000117410, ATP6V0B, ATPase H+ transporting V0 subunit b, [RH, Score=259, Expect=3e-88]} {Mouse: ENSMUSG00000033379, Atp6v0b, ATPase, H+ transporting, lysosomal V0 subunit B, [RH, Score=259, Expect=2e-88]} {Dmel: FBgn0028662, VhaPPA1-1, Vacuolar H[+] ATPase PPA1 subunit 1, [RH, Score=217, Expect=1e-71]} {Celegans: WBGene00006913, vha-4, VHA-4; Vacuolar H ATPase, [RH, Score=218, Expect=4e-72]} {Smed: dd_Smed_v6_1622_0_1, dd_Smed_v6_1622_0_1, [RH, Score=261, Expect=2e-89]} {RNA1509_26018} {RNA1310_25584} {RNA815_9308.1} Mlig455_031048 {REF} {Length: 1363} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=88.3]} {Human: ENSG00000117410, ATP6V0B, ATPase H+ transporting V0 subunit b, [RH, Score=259, Expect=3e-88]} {Mouse: ENSMUSG00000033379, Atp6v0b, ATPase, H+ transporting, lysosomal V0 subunit B, [RH, Score=259, Expect=2e-88]} {Dmel: FBgn0028662, VhaPPA1-1, Vacuolar H[+] ATPase PPA1 subunit 1, [RH, Score=217, Expect=1e-71]} {Celegans: WBGene00006913, vha-4, VHA-4; Vacuolar H ATPase, [RH, Score=218, Expect=4e-72]} {Smed: dd_Smed_v6_1622_0_1, dd_Smed_v6_1622_0_1, [RH, Score=261, Expect=2e-89]} {RNA1509_26018} {RNA1310_25584} {RNA815_9308.1} Mlig455_031055 {REF} {Length: 1365} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=88.3]} {Human: ENSG00000117410, ATP6V0B, ATPase H+ transporting V0 subunit b, [RH, Score=259, Expect=3e-88]} {Mouse: ENSMUSG00000033379, Atp6v0b, ATPase, H+ transporting, lysosomal V0 subunit B, [RH, Score=259, Expect=2e-88]} {Dmel: FBgn0028662, VhaPPA1-1, Vacuolar H[+] ATPase PPA1 subunit 1, [RH, Score=217, Expect=1e-71]} {Celegans: WBGene00006913, vha-4, VHA-4; Vacuolar H ATPase, [RH, Score=218, Expect=4e-72]} {Smed: dd_Smed_v6_1622_0_1, dd_Smed_v6_1622_0_1, [RH, Score=261, Expect=2e-89]} {RNA1509_26018, RNA1509_58235} {RNA1310_25584, RNA1509_26018, RNA1509_58235} {RNA1509_26018, RNA1509_58235, RNA815_9308.1} |