Data search


search
Exact
Search

Results for MligTC455_41804

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41804 1219 25.39 Mlig455_001657, Mlig455_050107

Neo: -

Age: -

TBL1XR1

Mlig455_001657 {REF} {Length: 1216} {RNA1509_35536} {RNA1310_48446.1, RNA1509_35536} {RNA1509_35536, RNA815_1670}

Mlig455_050107 {REF} {Length: 3364} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=158.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=104.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=41.5]; LisH [PF08513.13, score=24.5]; Coatomer WD associated region [PF04053.16, score=22.5]} {Human: ENSG00000177565, TBL1XR1, transducin beta like 1 X-linked receptor 1, [RH, Score=684, Expect=0.0]; ENSG00000101849, TBL1X, transducin beta like 1 X-linked, [RH, Score=679, Expect=0.0]; ENSG00000092377, TBL1Y, transducin beta like 1 Y-linked, [RH, Score=673, Expect=0.0]} {Mouse: ENSMUSG00000027630, Tbl1xr1, transducin (beta)-like 1X-linked receptor 1, [RH, Score=692, Expect=0.0]; ENSMUSG00000025246, Tbl1x, transducin (beta)-like 1 X-linked, [RH, Score=677, Expect=0.0]} {Dmel: FBgn0263933, ebi, [RH, Score=568, Expect=0.0]} {Celegans: WBGene00021074, W07E6.2, [Score=109, Expect=2e-25]} {Smed: dd_Smed_v6_3247_0_1, dd_Smed_v6_3247_0_1, [RH, Score=519, Expect=1e-180]} {RNA1509_10901} {RNA1310_6496.1, RNA1509_10901} {RNA1509_10901, RNA815_1670}

Cumulative graph for MligTC455_41804

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.38 4.905 0.69167 1.00000
RegionR2 0.65 4.905 0.12307 0.43448
RegionR3 -0.407 4.905 0.27192 0.81625
RegionR4 -0.498 4.905 0.22627 0.51832
RegionR5 0.519 4.905 0.09445 0.29377
RegionR6 0.379 4.905 0.26681 0.85500
RegionR7 -0.194 4.905 0.67701 1.00000
RegionR8 -0.069 4.905 0.90602 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.028 4.905 0.98162 1.00000
RegenerationR2 -0.223 4.905 0.54021 0.88821
RegenerationR3 0.31 4.905 0.45103 0.83265
RegenerationR4 0.228 4.905 0.57542 0.90383
RegenerationR5 0.147 4.905 0.69349 0.94920
RegenerationR6 -0.093 4.905 0.81477 0.98468
RegenerationBL 0.585 4.905 0.18145 0.51070
RegenerationTP 0.127 4.905 0.80155 1.00000


Genes with expression patterns similar to MligTC455_41804

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41804 1219 25.39 Mlig455_001657, Mlig455_050107

Neo: -

Age: -

TBL1XR1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_001657 {REF} {Length: 1216} {RNA1509_35536} {RNA1310_48446.1, RNA1509_35536} {RNA1509_35536, RNA815_1670}

Mlig455_050107 {REF} {Length: 3364} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=158.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=104.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=41.5]; LisH [PF08513.13, score=24.5]; Coatomer WD associated region [PF04053.16, score=22.5]} {Human: ENSG00000177565, TBL1XR1, transducin beta like 1 X-linked receptor 1, [RH, Score=684, Expect=0.0]; ENSG00000101849, TBL1X, transducin beta like 1 X-linked, [RH, Score=679, Expect=0.0]; ENSG00000092377, TBL1Y, transducin beta like 1 Y-linked, [RH, Score=673, Expect=0.0]} {Mouse: ENSMUSG00000027630, Tbl1xr1, transducin (beta)-like 1X-linked receptor 1, [RH, Score=692, Expect=0.0]; ENSMUSG00000025246, Tbl1x, transducin (beta)-like 1 X-linked, [RH, Score=677, Expect=0.0]} {Dmel: FBgn0263933, ebi, [RH, Score=568, Expect=0.0]} {Celegans: WBGene00021074, W07E6.2, [Score=109, Expect=2e-25]} {Smed: dd_Smed_v6_3247_0_1, dd_Smed_v6_3247_0_1, [RH, Score=519, Expect=1e-180]} {RNA1509_10901} {RNA1310_6496.1, RNA1509_10901} {RNA1509_10901, RNA815_1670}
2. MligTC455_46672 938 19.55 Mlig455_012928, Mlig455_039835

Neo: -

Age: logFC(26M/2M)=0.241

ELAVL1 2.556 - - 0.724 0.882 - 0.950

Mlig455_012928 {REF} {Length: 2726} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=93.8]; RNA recognition motif [PF16367.7, score=19.4]} {Human: ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=122, Expect=3e-32]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=117, Expect=2e-30]} {Mouse: ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=120, Expect=2e-31]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=117, Expect=2e-30]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=116, Expect=6e-31]} {Dmel: FBgn0264270, Sxl, Sex lethal, [Score=117, Expect=2e-30]} {Celegans: WBGene00001368, exc-7, [Score=104, Expect=2e-25]} {Smed: dd_Smed_v6_11311_0_1, dd_Smed_v6_11311_0_1, [Score=100, Expect=5e-26]} {RNA1509_27115, RNA1509_52329} {RNA1310_32659, RNA1509_52329} {RNA1509_52329, RNA815_26376}

Mlig455_039835 {REF} {Length: 2317} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=93.8]; RNA recognition motif [PF16367.7, score=19.2]} {Human: ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=122, Expect=3e-32]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=118, Expect=2e-30]} {Mouse: ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=120, Expect=2e-31]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=118, Expect=1e-30]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=116, Expect=7e-31]} {Dmel: FBgn0264270, Sxl, Sex lethal, [Score=117, Expect=2e-30]} {Celegans: WBGene00001368, exc-7, [Score=105, Expect=1e-25]} {Smed: dd_Smed_v6_11311_0_1, dd_Smed_v6_11311_0_1, [Score=100, Expect=4e-26]} {RNA1509_27115, RNA1509_33870, RNA1509_34181} {RNA1310_32659, RNA1509_27115, RNA1509_33870, RNA1509_34181} {RNA1509_27115, RNA1509_33870, RNA1509_34181, RNA815_26376}
3. MligTC455_26386 624 13 Mlig455_020042

Neo: -

Age: logFC(26M/2M)=0.231

Region-enriched R5: 1.382/0.00337

2.425 - - 0.743 - 0.719 0.963 Mlig455_020042 {REF} {Length: 4207} {TRANSSPLICED} {Smed: dd_Smed_v6_3465_0_1, dd_Smed_v6_3465_0_1, [RH, Score=112, Expect=6e-26]} {RNA1509_13462, RNA1509_58720} {RNA1310_9257, RNA1509_13462, RNA1509_58720} {RNA1509_13462, RNA1509_58720, RNA815_5213}
4. MligTC455_23626 339 7.06 Mlig455_065292, Mlig455_065316

Neo: -

Age: -

KIAA0930 2.421 - - 0.719 - 0.751 0.951

Mlig455_065292 {REF} {Length: 5359} {Pfam: Uncharacterized conserved protein (DUF2045) [PF09741.11, score=220.5]} {Human: ENSG00000100364, KIAA0930, KIAA0930, [RH, Score=216, Expect=2e-62]} {Mouse: ENSMUSG00000036046, 5031439G07Rik, RIKEN cDNA 5031439G07 gene, [RH, Score=207, Expect=8e-59]} {Dmel: FBgn0034184, CG9646, [RH, Score=264, Expect=5e-80]} {Celegans: WBGene00015866, C16E9.2, [Score=222, Expect=2e-64]} {Smed: dd_Smed_v6_6401_0_1, dd_Smed_v6_6401_0_1, [Score=268, Expect=2e-81]} {RNA1509_45284} {RNA1310_9456.1, RNA1509_45284} {RNA1509_45284, RNA815_27690}

Mlig455_065316 {REF} {Length: 4497} {Pfam: Uncharacterized conserved protein (DUF2045) [PF09741.11, score=221.3]} {Human: ENSG00000100364, KIAA0930, KIAA0930, [RH, Score=218, Expect=5e-64]} {Mouse: ENSMUSG00000036046, 5031439G07Rik, RIKEN cDNA 5031439G07 gene, [RH, Score=208, Expect=4e-60]} {Dmel: FBgn0034184, CG9646, [RH, Score=268, Expect=4e-83]} {Celegans: WBGene00015866, C16E9.2, [Score=225, Expect=1e-66]} {Smed: dd_Smed_v6_6401_0_1, dd_Smed_v6_6401_0_1, [Score=271, Expect=5e-84]} {RNA1509_45284, RNA1509_51132, RNA1509_52104} {RNA1310_9456.1, RNA1509_51132, RNA1509_52104} {RNA1509_51132, RNA1509_52104, RNA815_27690}
5. MligTC455_21135 143 2.97 Mlig455_015452

Neo: -

Age: -

KMT2C 1.728 - - - 0.775 0.953 - Mlig455_015452 {REF} {Length: 5052} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=62.5]; PHD-zinc-finger like domain [PF13832.8, score=31.0]; PHD-like zinc-binding domain [PF13771.8, score=23.7]; F/Y-rich N-terminus [PF05964.16, score=18.6]} {Human: ENSG00000055609, KMT2C, lysine methyltransferase 2C, [Score=211, Expect=8e-55]; ENSG00000167548, KMT2D, lysine methyltransferase 2D, [Score=204, Expect=4e-52]} {Mouse: ENSMUSG00000038056, Kmt2c, lysine (K)-specific methyltransferase 2C, [Score=211, Expect=1e-54]; ENSMUSG00000048154, Kmt2d, lysine (K)-specific methyltransferase 2D, [Score=204, Expect=2e-52]} {Dmel: FBgn0023518, trr, trithorax-related, [Score=186, Expect=5e-47]} {Celegans: WBGene00011729, set-16, Histone-lysine N-methyltransferase, [Score=148, Expect=1e-35]} {Smed: dd_Smed_v6_6838_0_1, dd_Smed_v6_6838_0_1, [Score=198, Expect=2e-51]} {RNA1509_12595} {RNA1310_1313.2} {RNA815_2378}
6. MligTC455_48833 702 14.62 Mlig455_006923, Mlig455_017937

Neo: -

Age: -

Region-enriched R5: 1.677/0.02053

RNF2 1.707 - - - - 0.757 0.950

Mlig455_006923 {REF} {Length: 2956} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990, RNA1509_26957} {RNA1509_26957, RNA815_16348}

Mlig455_017937 {REF} {Length: 2921} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990} {RNA815_16348}
7. MligTC455_43250 461 9.6 Mlig455_016728

Neo: -

Age: Up-Down-Up

MKLN1 1.678 - - 0.724 0.954 - - Mlig455_016728 {REF} {Length: 1808} {Human: ENSG00000128585, MKLN1, muskelin 1, [Score=92.4, Expect=3e-20]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=92.8, Expect=2e-22]} {Dmel: FBgn0033757, muskelin, [Score=95.1, Expect=2e-21]} {RNA1509_13339} {RNA1310_3016.1} {RNA815_1486}
8. MligTC455_43251 460 9.59 Mlig455_016660, Mlig455_016727

Neo: -

Age: -

MKLN1 1.676 - - 0.724 0.952 - -

Mlig455_016660 {REF} {Length: 3631} {TRANSSPLICED} {Pfam: Muskelin N-terminus [PF06588.13, score=195.6]; Galactose oxidase, central domain [PF13415.8, score=76.5]; Kelch motif [PF13964.8, score=40.9]; Kelch motif [PF01344.27, score=36.8]; Galactose oxidase, central domain [PF13418.8, score=34.8]; Kelch motif [PF13854.8, score=31.7]; Kelch motif [PF07646.17, score=27.0]} {Human: ENSG00000128585, MKLN1, muskelin 1, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0033757, muskelin, [RH, Score=489, Expect=4e-160]} {RNA1509_13339, RNA1509_15922} {RNA1310_3016.1, RNA1509_13339, RNA1509_15922} {RNA1509_13339, RNA1509_15922, RNA815_1486}

Mlig455_016727 {REF} {Length: 279} {TRANSSPLICED} {Pfam: Muskelin N-terminus [PF06588.13, score=195.6]; Galactose oxidase, central domain [PF13415.8, score=76.5]; Kelch motif [PF13964.8, score=40.9]; Kelch motif [PF01344.27, score=36.8]; Galactose oxidase, central domain [PF13418.8, score=34.8]; Kelch motif [PF13854.8, score=31.7]; Kelch motif [PF07646.17, score=27.0]} {Human: ENSG00000128585, MKLN1, muskelin 1, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0033757, muskelin, [RH, Score=489, Expect=4e-160]} {RNA1509_15922} {RNA1310_20443} {RNA815_1486}
9. MligTC455_48996 148 3.09 Mlig455_000709, Mlig455_000763, Mlig455_033466

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.589

ANK2, CHRNB3 0.982 - - - - 0.982 -

Mlig455_000709 {REF} {Length: 4279} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=216.3]; Ankyrin repeats (many copies) [PF13637.8, score=213.5]; Ankyrin repeats (many copies) [PF13857.8, score=161.7]; Ankyrin repeat [PF00023.32, score=156.2]; Ankyrin repeat [PF13606.8, score=143.5]; Mab-21 protein [PF03281.16, score=29.5]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=200, Expect=2e-51]; ENSG00000151150, ANK3, ankyrin 3, [Score=194, Expect=2e-49]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=196, Expect=5e-50]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=193, Expect=2e-49]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=202, Expect=3e-52]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=204, Expect=3e-53]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=182, Expect=3e-46]} {RNA1509_42834} {RNA1310_5424.1, RNA1509_42834} {RNA1509_42834, RNA815_8238}

Mlig455_000763 {REF} {Length: 4250} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=255.0]; Ankyrin repeats (many copies) [PF13637.8, score=219.3]; Ankyrin repeat [PF00023.32, score=163.4]; Ankyrin repeat [PF13606.8, score=156.1]; Ankyrin repeats (many copies) [PF13857.8, score=150.4]; Mab-21 protein [PF03281.16, score=31.6]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=207, Expect=1e-53]; ENSG00000151150, ANK3, ankyrin 3, [Score=200, Expect=3e-51]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=202, Expect=6e-52]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=196, Expect=4e-50]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=209, Expect=2e-54]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=210, Expect=7e-55]} {Smed: dd_Smed_v6_6898_0_1, dd_Smed_v6_6898_0_1, [Score=180, Expect=1e-46]} {RNA1509_42834} {RNA1310_5424.1} {RNA815_8238}

Mlig455_033466 {REF} {Length: 1168} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=104.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=32.8]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=114, Expect=1e-27]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=108, Expect=2e-25]; ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=106, Expect=6e-25]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=94.0, Expect=1e-20]} {Celegans: WBGene00000951, deg-3, Acetylcholine receptor subunit alpha-type deg-3, [Score=96.7, Expect=2e-21]} {Smed: dd_Smed_v6_62726_0_1, dd_Smed_v6_62726_0_1, [Score=156, Expect=7e-44]} {RNA1310_44183.2} {RNA815_32188}
10. MligTC455_21060 340 7.09 Mlig455_070218

Neo: -

Age: -

Region-enriched R5: 1.197/0.04030

PPAT 0.967 - - - - - 0.967 Mlig455_070218 {REF} {Length: 2514} {TRANSSPLICED} {Pfam: Glutamine amidotransferase domain [PF13522.8, score=54.9]; Glutamine amidotransferase domain [PF13537.8, score=51.4]; Phosphoribosyl transferase domain [PF00156.29, score=28.9]; Glutamine amidotransferases class-II [PF13230.8, score=21.9]} {Human: ENSG00000128059, PPAT, phosphoribosyl pyrophosphate amidotransferase, [RH, Score=533, Expect=0.0]} {Mouse: ENSMUSG00000029246, Ppat, phosphoribosyl pyrophosphate amidotransferase, [RH, Score=533, Expect=0.0]} {Dmel: FBgn0041194, Prat2, Phosphoribosylamidotransferase 2, [RH, Score=513, Expect=2e-178]} {Celegans: WBGene00011407, ppat-1, Amidophosphoribosyltransferase, [RH, Score=406, Expect=2e-137]} {Smed: dd_Smed_v6_10667_0_1, dd_Smed_v6_10667_0_1, [RH, Score=518, Expect=0.0]} {RNA1509_21632} {RNA1310_8749, RNA1509_21632} {RNA1509_21632, RNA815_5739}
11. MligTC455_24211 545 11.35 Mlig455_025806

Neo: -

Age: -

PRPSAP2 0.967 - - - - - 0.967 Mlig455_025806 {REF} {Length: 3917} {Pfam: Phosphoribosyl synthetase-associated domain [PF14572.8, score=259.9]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=119.4]; Phosphoribosyl transferase domain [PF00156.29, score=29.0]} {Human: ENSG00000141127, PRPSAP2, phosphoribosyl pyrophosphate synthetase associated protein 2, [RH, Score=384, Expect=1e-131]} {Mouse: ENSMUSG00000020528, Prpsap2, phosphoribosyl pyrophosphate synthetase-associated protein 2, [RH, Score=381, Expect=9e-131]; ENSMUSG00000015869, Prpsap1, phosphoribosyl pyrophosphate synthetase-associated protein 1, [RH, Score=363, Expect=2e-123]} {Dmel: FBgn0039790, CG2246, [RH, Score=421, Expect=3e-146]} {Celegans: WBGene00012258, W04G3.5, [RH, Score=400, Expect=1e-138]} {Smed: dd_Smed_v6_4658_0_1, dd_Smed_v6_4658_0_1, [RH, Score=466, Expect=1e-164]} {RNA1509_17844} {RNA1310_7445} {RNA815_13869.1}
12. MligTC455_38002 38 0.8 Mlig455_021320

Neo: -

Age: -

0.966 - - - - 0.966 - Mlig455_021320 {REF} {Length: 1286} {RNA1509_41055} {RNA1310_56949} {RNA815_35774}
13. MligTC455_40396 351 7.31 Mlig455_043026

Neo: -

Age: -

UCHL3 0.966 - - - 0.966 - - Mlig455_043026 {REF} {Length: 3026} {Pfam: Ubiquitin carboxyl-terminal hydrolase, family 1 [PF01088.23, score=191.3]} {Human: ENSG00000118939, UCHL3, ubiquitin C-terminal hydrolase L3, [RH, Score=203, Expect=2e-65]} {Mouse: ENSMUSG00000022111, Uchl3, ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase), [RH, Score=203, Expect=1e-65]; ENSMUSG00000035337, Uchl4, ubiquitin carboxyl-terminal esterase L4, [RH, Score=194, Expect=6e-62]} {Dmel: FBgn0010288, Uch, Ubiquitin carboxy-terminal hydrolase, [RH, Score=174, Expect=1e-54]} {Celegans: WBGene00006721, ubh-1, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=109, Expect=3e-29]} {Smed: dd_Smed_v6_7488_0_1, dd_Smed_v6_7488_0_1, [RH, Score=189, Expect=1e-60]} {RNA1509_16357} {RNA1310_29575} {RNA815_15587}
14. MligTC455_35291 234 4.88 Mlig455_027788, Mlig455_063457

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.963

Region-enriched R4: 3.530/0.01207
Region-enriched R5: 2.680/0.00642

TMEM9 0.964 - - - - - 0.964

Mlig455_027788 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=50.6]} {RNA1509_36378} {RNA1310_37814.1, RNA1509_36378} {RNA1509_36378, RNA815_28046}

Mlig455_063457 {REF} {Length: 2038} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=65.9]} {Human: ENSG00000116857, TMEM9, transmembrane protein 9, [Score=46.6, Expect=8e-06]} {Celegans: WBGene00020026, R12C12.6, [RH, Score=57.0, Expect=2e-09]} {RNA1509_36378} {RNA1310_37814.1} {RNA815_28046}
15. MligTC455_53275 60 1.25 Mlig455_033794

Neo: -

Age: -

GLI3 0.963 - - - - 0.963 - Mlig455_033794 {REF} {Length: 2359} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=22.4]} {Human: ENSG00000106571, GLI3, GLI family zinc finger 3, [Score=82.4, Expect=1e-15]; ENSG00000111087, GLI1, GLI family zinc finger 1, [Score=80.1, Expect=5e-15]; ENSG00000074047, GLI2, GLI family zinc finger 2, [Score=79.0, Expect=2e-14]} {Mouse: ENSMUSG00000021318, Gli3, GLI-Kruppel family member GLI3, [Score=82.8, Expect=7e-16]; ENSMUSG00000025407, Gli1, GLI-Kruppel family member GLI1, [Score=80.5, Expect=3e-15]; ENSMUSG00000048402, Gli2, GLI-Kruppel family member GLI2, [Score=79.0, Expect=1e-14]} {Dmel: FBgn0004859, ci, cubitus interruptus, [Score=87.4, Expect=1e-17]} {Celegans: WBGene00006604, tra-1, Sex-determining transformer protein 1, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_7470_0_1, dd_Smed_v6_7470_0_1, [Score=88.6, Expect=3e-18]} {RNA1509_45457, RNA1509_5991} {RNA1310_3099, RNA1509_45457} {RNA1509_45457, RNA815_10461.1}
16. MligTC455_52262 145 3.02 Mlig455_055398

Neo: -

Age: -

DHX9 0.96 - - - - 0.960 - Mlig455_055398 {REF} {Length: 4891} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=73.1]; Helicase conserved C-terminal domain [PF00271.33, score=52.8]; Helicase associated domain (HA2) [PF04408.25, score=50.2]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=39.1]; DEAD/DEAH box helicase [PF00270.31, score=30.5]} {Human: ENSG00000135829, DHX9, DExH-box helicase 9, [RH, Score=1137, Expect=0.0]} {Mouse: ENSMUSG00000042699, Dhx9, DEAH (Asp-Glu-Ala-His) box polypeptide 9, [RH, Score=1120, Expect=0.0]} {Dmel: FBgn0002774, mle, maleless, [RH, Score=1058, Expect=0.0]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [RH, Score=868, Expect=0.0]} {Smed: dd_Smed_v6_4815_0_1, dd_Smed_v6_4815_0_1, [RH, Score=1115, Expect=0.0]} {RNA1509_8352} {RNA1310_2204.1} {RNA815_3757}
17. MligTC455_44569 311 6.48 Mlig455_050289

Neo: -

Age: Down-Up-Down

PARL 0.958 - - - - - 0.958 Mlig455_050289 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: Rhomboid family [PF01694.24, score=30.8]} {Human: ENSG00000175193, PARL, presenilin associated rhomboid like, [Score=48.9, Expect=8e-06]} {Mouse: ENSMUSG00000033918, Parl, presenilin associated, rhomboid-like, [Score=49.7, Expect=4e-06]} {RNA1509_23398, RNA1509_32773, RNA1509_55819} {RNA1310_18994.1, RNA1509_23398, RNA1509_55819} {RNA1509_23398, RNA1509_55819, RNA815_19436}
18. MligTC455_36229 56 1.17 Mlig455_034167

Neo: -

Age: logFC(26M/2M)=0.270

0.956 - - - - 0.956 - Mlig455_034167 {REF} {Length: 1450} {Pfam: Bap31/Bap29 transmembrane region [PF05529.14, score=46.9]} {RNA1509_57332} {RNA1310_24734.1} {RNA815_20971.1}
19. MligTC455_41728 30 0.62 Mlig455_027804

Neo: -

Age: logFC(26M/2M)=-0.380

KATNAL2 0.955 - - - - 0.955 - Mlig455_027804 {REF} {Length: 2299} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=126.6]; AAA+ lid domain [PF17862.3, score=47.1]; LisH [PF08513.13, score=26.4]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=22.3]; AAA ATPase domain [PF13191.8, score=19.5]; TIP49 P-loop domain [PF06068.15, score=19.1]; AAA domain (dynein-related subfamily) [PF07728.16, score=18.8]; Magnesium chelatase, subunit ChlI [PF01078.23, score=18.1]} {Human: ENSG00000167216, KATNAL2, katanin catalytic subunit A1 like 2, [RH, Score=609, Expect=0.0]} {Mouse: ENSMUSG00000025420, Katnal2, katanin p60 subunit A-like 2, [RH, Score=609, Expect=0.0]} {Dmel: FBgn0040208, Kat60, Katanin 60, [Score=279, Expect=4e-86]} {Celegans: WBGene00003183, mei-1, Meiotic spindle formation protein mei-1, [Score=260, Expect=3e-80]} {Smed: dd_Smed_v6_14853_0_1, dd_Smed_v6_14853_0_1, [RH, Score=646, Expect=0.0]} {RNA1509_14139, RNA1509_56577} {RNA1310_9263.1, RNA1509_56577} {RNA1509_56577, RNA815_5637}
20. MligTC455_22453 308 6.42 Mlig455_002760, Mlig455_063360

Neo: -

Age: -

Region-enriched R7: 1.998/0.00091

RHBDL2 0.954 - - - - 0.954 -

Mlig455_002760 {REF} {Length: 340} {NoTransDecoderORF} {RNA1310_79323} {RNA815_51519}

Mlig455_063360 {REF} {Length: 4019} {Pfam: Rhomboid family [PF01694.24, score=76.7]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [Score=111, Expect=1e-26]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=117, Expect=8e-29]} {Dmel: FBgn0020248, stet, stem cell tumor, [Score=128, Expect=1e-31]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=96.3, Expect=2e-21]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [Score=207, Expect=4e-61]} {RNA1509_50956} {RNA1310_32207} {RNA815_21281}
21. MligTC455_35784 20 0.41 Mlig455_020625

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_020625 {REF} {Length: 14090} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=57.0]} {Smed: dd_Smed_v6_25838_0_1, dd_Smed_v6_25838_0_1, [Score=50.8, Expect=4e-07]} {RNA1310_27633} {RNA815_47416}
22. MligTC455_37347 61 1.28 Mlig455_023488

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_023488 {REF} {Length: 2074} {RNA1509_44081} {RNA1310_36129} {RNA815_2004}
23. MligTC455_33715 36 0.75 Mlig455_048624, Mlig455_048741

Neo: -

Age: -

0.952 - - - - 0.952 -

Mlig455_048624 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_54597} {RNA1310_113588} {RNA815_29533}

Mlig455_048741 {REF} {Length: 651} {RNA1310_113588} {RNA815_29533}
24. MligTC455_11366 258 5.38 Mlig455_016557

Neo: -

Age: -

Region-enriched R5: 1.351/0.01677

0.951 - - - - - 0.951 Mlig455_016557 {REF} {Length: 3002} {TRANSSPLICED} {Pfam: Afadin- and alpha -actinin-Binding [PF11559.10, score=54.5]} {Mouse: ENSMUSG00000036825, Ssx2ip, synovial sarcoma, X 2 interacting protein, [RH, Score=92.0, Expect=1e-19]} {RNA1509_10737, RNA1509_37638, RNA1509_45686} {RNA1310_9399, RNA1509_10737, RNA1509_37638, RNA1509_45686} {RNA1509_10737, RNA1509_37638, RNA1509_45686, RNA815_26177}
25. MligTC455_31129 1008 21 Mlig455_005615, Mlig455_070184

Neo: Irradiation

Age: logFC(26M/2M)=0.545

Region-specific R5: 1.527

Region-enriched R5: 1.021/0.00725

LIG4 0.951 - - - - - 0.951

Mlig455_005615 {REF} {Length: 3975} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=70.9]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.5]; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=57.1]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.4]; RNA ligase [PF09414.12, score=29.0]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.6]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [Score=546, Expect=2e-178]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [Score=541, Expect=7e-177]} {Dmel: FBgn0030506, Lig4, Ligase4, [Score=214, Expect=4e-57]} {Celegans: WBGene00002986, lig-4, LIGase, [RH, Score=127, Expect=1e-29]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [Score=504, Expect=6e-163]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459}

Mlig455_070184 {REF} {Length: 3787} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.6]; RNA ligase [PF09414.12, score=29.1]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=648, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=253, Expect=3e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=134, Expect=7e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_4940} {RNA1310_2815, RNA1509_4940} {RNA1509_4940, RNA815_3459}
26. MligTC455_46109 27 0.56 Mlig455_015554

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_015554 {REF} {Length: 2498} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.8]} {Celegans: WBGene00019445, frpr-12, FMRFamide Peptide Receptor family, [Score=48.9, Expect=4e-06]} {Smed: dd_Smed_v6_21110_0_1, dd_Smed_v6_21110_0_1, [Score=202, Expect=1e-60]} {RNA1310_42800} {RNA815_34794}
27. MligTC455_22863 207 4.31 Mlig455_016956

Neo: -

Age: -

Region-enriched R5: 1.631/0.00395

TOPORS 0.95 - - - - - 0.950 Mlig455_016956 {REF} {Length: 3896} {Pfam: Ring finger domain [PF13639.8, score=33.8]; RING-H2 zinc finger domain [PF12678.9, score=27.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.2]; RING-type zinc-finger [PF13445.8, score=23.0]; Zinc-ribbon, C4HC2 type [PF17120.7, score=21.8]} {Human: ENSG00000197579, TOPORS, TOP1 binding arginine/serine rich protein, [Score=50.1, Expect=4e-06]} {Mouse: ENSMUSG00000036822, Topors, topoisomerase I binding, arginine/serine-rich, [Score=49.7, Expect=4e-06]} {Dmel: FBgn0037344, CG2926, [Score=65.5, Expect=3e-11]} {Smed: dd_Smed_v6_8691_0_1, dd_Smed_v6_8691_0_1, [Score=47.0, Expect=1e-06]} {RNA1509_14851} {RNA1310_7090.1} {RNA815_11461}
28. MligTC455_23274 829 17.27 Mlig455_034146

Neo: -

Age: Up-Down-Up

GBF1 0.95 - - - - 0.950 - Mlig455_034146 {REF} {Length: 9172} {TRANSSPLICED} {Pfam: Sec7 domain [PF01369.22, score=214.6]; Guanine nucleotide exchange factor in Golgi transport N-terminal [PF12783.9, score=73.7]} {Human: ENSG00000107862, GBF1, golgi brefeldin A resistant guanine nucleotide exchange factor 1, [Score=1199, Expect=0.0]} {Mouse: ENSMUSG00000025224, Gbf1, golgi-specific brefeldin A-resistance factor 1, [RH, Score=1204, Expect=0.0]} {Dmel: FBgn0264560, garz, gartenzwerg, [RH, Score=1029, Expect=0.0]} {Celegans: WBGene00007703, gbf-1, [Score=873, Expect=0.0]} {Smed: dd_Smed_v6_8011_0_2, dd_Smed_v6_8011_0_2, [Score=850, Expect=0.0]} {RNA1509_5663} {RNA1310_634, RNA1509_5663} {RNA1509_5663, RNA815_524}
29. MligTC455_47866 19 0.4 Mlig455_060884

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_060884 {REF} {Length: 1651} {RNA1310_116717}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA