Data search
Results for MligTC455_46740
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46740 | 11815 | 246.15 | Mlig455_039886 | Neo: - Age: - Region-enriched R7: 1.641/0.00015 |
WSCD2 | Mlig455_039886 {REF} {Length: 4970} {Pfam: WSC domain [PF01822.21, score=496.5]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [RH, Score=68.6, Expect=4e-13]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=70.9, Expect=6e-12]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=67.4, Expect=6e-11]} {Celegans: WBGene00009362, F33E2.6, [Score=63.5, Expect=8e-10]} {RNA1509_10624, RNA1509_2420} {RNA1310_1445, RNA1509_10624} {RNA1509_10624, RNA815_405.1} |
Cumulative graph for MligTC455_46740
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.749 | 7.948 | 0.12547 | 0.72017 | |
| RegionR2 | -0.409 | 7.948 | 0.34466 | 0.73707 | |
| RegionR3 | -0.237 | 7.948 | 0.53485 | 1.00000 | |
| RegionR4 | -0.408 | 7.948 | 0.34980 | 0.67134 | |
| RegionR5 | -0.943 | 7.948 | 0.01811 | 0.09000 | |
| RegionR6 | -0.087 | 7.948 | 0.81879 | 1.00000 | |
| RegionR7 | 1.641 | 7.948 | 0.00000 | 0.00015 | |
| RegionR8 | -0.306 | 7.948 | 0.49068 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.203 | 7.948 | 0.73899 | 1.00000 | |
| RegenerationR2 | 0.331 | 7.948 | 0.50732 | 0.87419 | |
| RegenerationR3 | 0.659 | 7.948 | 0.19011 | 0.62532 | |
| RegenerationR4 | 0.391 | 7.948 | 0.44671 | 0.84020 | |
| RegenerationR5 | 1.003 | 7.948 | 0.04399 | 0.34385 | |
| RegenerationR6 | 0.667 | 7.948 | 0.17633 | 0.50966 | |
| RegenerationBL | -0.295 | 7.948 | 0.49214 | 0.85719 | |
| RegenerationTP | 0.619 | 7.948 | 0.16794 | 0.60016 |
Genes with expression patterns similar to MligTC455_46740
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46740 | 11815 | 246.15 | Mlig455_039886 | Neo: - Age: - Region-enriched R7: 1.641/0.00015 |
WSCD2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_039886 {REF} {Length: 4970} {Pfam: WSC domain [PF01822.21, score=496.5]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [RH, Score=68.6, Expect=4e-13]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=70.9, Expect=6e-12]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=67.4, Expect=6e-11]} {Celegans: WBGene00009362, F33E2.6, [Score=63.5, Expect=8e-10]} {RNA1509_10624, RNA1509_2420} {RNA1310_1445, RNA1509_10624} {RNA1509_10624, RNA815_405.1} |
| 2. | MligTC455_24778 | 8682 | 180.88 | Mlig455_017187 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.294 Region-enriched R7: 1.507/0.00090 |
MATN1 | 3.562 | - | - | 0.857 | 0.970 | 0.838 | 0.897 | Mlig455_017187 {REF} {Length: 5498} {Pfam: von Willebrand factor type A domain [PF00092.30, score=330.9]; von Willebrand factor type A domain [PF13519.8, score=126.3]; von Willebrand factor type A domain [PF13768.8, score=67.2]; Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=24.6]} {Human: ENSG00000162510, MATN1, matrilin 1, [Score=84.0, Expect=7e-16]; ENSG00000111799, COL12A1, collagen type XII alpha 1 chain, [Score=84.0, Expect=2e-15]} {Mouse: ENSMUSG00000040533, Matn1, matrilin 1, cartilage matrix protein, [Score=83.6, Expect=6e-16]; ENSMUSG00000032332, Col12a1, collagen, type XII, alpha 1, [Score=81.3, Expect=1e-14]; ENSMUSG00000032572, Col6a4, collagen, type VI, alpha 4, [Score=80.9, Expect=1e-14]} {Smed: dd_Smed_v6_1071_0_1, dd_Smed_v6_1071_0_1, [Score=77.4, Expect=4e-14]} {RNA1509_14277, RNA1509_40604, RNA1509_724} {RNA1310_1588.1, RNA1509_14277, RNA1509_40604} {RNA1509_14277, RNA1509_40604, RNA815_464} |
Berezikov Lab - 2020-2021 © ERIBA