TomoSeq data search

Data search

Results for MligTC455_46861

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46861

3718

77.45

Mlig455_003353

Neo: -

Age: Down-Up-Down

Mlig455_003353 {REF} {Length: 366} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_7676} {RNA1310_5750.1} {RNA815_2172.1}

Cumulative graph for MligTC455_46861

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.807	6.315	0.10718	0.68474
RegionR2	0.166	6.315	0.52392	0.89697
RegionR3	0.08	6.315	0.71661	1.00000
RegionR4	0.012	6.315	0.96082	1.00000
RegionR5	0.257	6.315	0.20488	0.49797
RegionR6	0.036	6.315	0.87154	1.00000
RegionR7	-0.014	6.315	0.95460	1.00000
RegionR8	0.27	6.315	0.33509	0.96773

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.859	6.315	0.17658	0.91886
RegenerationR2	-0.196	6.315	0.43166	0.83470
RegenerationR3	0.144	6.315	0.59399	0.90538
RegenerationR4	0.052	6.315	0.85060	1.00000
RegenerationR5	0.039	6.315	0.88124	1.00000
RegenerationR6	0.293	6.315	0.27587	0.62492
RegenerationBL	-0.573	6.315	0.04912	0.25470
RegenerationTP	0.627	6.315	0.02438	0.26483

Genes with expression patterns similar to MligTC455_46861

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46861	3718	77.45	Mlig455_003353	Neo: - Age: Down-Up-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_003353 {REF} {Length: 366} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_7676} {RNA1310_5750.1} {RNA815_2172.1}
2.	MligTC455_24502	16230	338.12	Mlig455_019151	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=1.555		0.955	-	-	-	-	0.955	-	Mlig455_019151 {REF} {Length: 618} {NoTransDecoderORF} {RNA1509_23040} {RNA1310_59235} {RNA815_27597}
3.	MligTC455_32715	7927	165.14	Mlig455_048846	Neo: Int S/G2/M Age: -		0.954	-	-	-	-	0.954	-	Mlig455_048846 {REF} {Length: 542} {TRANSSPLICED} {Pfam: ATP synthase regulation [PF14960.8, score=54.0]} {RNA1509_795} {RNA1310_52206.1, RNA1509_795} {RNA1509_795, RNA815_26551.1}
4.	MligTC455_24503	16264	338.83	Mlig455_038666	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.314	RPL28	0.953	-	-	-	-	0.953	-	Mlig455_038666 {REF} {Length: 599} {TRANSSPLICED} {Pfam: Ribosomal L28e protein family [PF01778.19, score=99.9]} {Human: ENSG00000108107, RPL28, ribosomal protein L28, [RH, Score=129, Expect=3e-39]} {Mouse: ENSMUSG00000030432, Rpl28, ribosomal protein L28, [RH, Score=130, Expect=1e-39]} {Dmel: FBgn0035422, RpL28, Ribosomal protein L28, [RH, Score=101, Expect=2e-28]} {Celegans: WBGene00004442, rpl-28, 60S ribosomal protein L28, [Score=48.9, Expect=2e-08]} {Smed: dd_Smed_v6_221_0_1, dd_Smed_v6_221_0_1, [RH, Score=74.3, Expect=4e-18]} {RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040} {RNA1310_59235, RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040} {RNA1509_1074, RNA1509_1650, RNA1509_2049, RNA1509_23040, RNA815_27597}
5.	MligTC455_34193	16336	340.33	Mlig455_024440	Neo: Int S/G2/M Age: Down-Up-Up	FAU	0.952	-	-	-	-	0.952	-	Mlig455_024440 {REF} {Length: 615} {TRANSSPLICED} {Pfam: Ribosomal protein S30 [PF04758.16, score=94.5]} {Human: ENSG00000149806, FAU, FAU, ubiquitin like and ribosomal protein S30 fusion, [RH, Score=97.8, Expect=2e-26]} {Mouse: ENSMUSG00000038274, Fau, Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), [RH, Score=99.0, Expect=6e-27]} {Dmel: FBgn0038834, RpS30, Ribosomal protein S30, [Score=86.3, Expect=4e-22]} {Celegans: WBGene00004499, rps-30, 40S ribosomal protein S30, [RH, Score=77.4, Expect=6e-19]} {Smed: dd_Smed_v6_126_0_1, dd_Smed_v6_126_0_1, [RH, Score=110, Expect=2e-31]} {RNA1509_11670, RNA1509_2308, RNA1509_25535, RNA1509_41132, RNA1509_502} {RNA1310_51006.2, RNA1509_11670, RNA1509_2308, RNA1509_25535, RNA1509_41132, RNA1509_502} {RNA1509_11670, RNA1509_2308, RNA1509_25535, RNA1509_41132, RNA1509_502, RNA815_29166}

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