TomoSeq data search

Data search

Results for MligTC455_46931

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46931

1052

21.92

Mlig455_017068

Neo: -

Age: -

EML1

Mlig455_017068 {REF} {Length: 5056} {Pfam: WD domain, G-beta repeat [PF00400.34, score=97.1]; HELP motif [PF03451.16, score=89.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=36.3]} {Human: ENSG00000066629, EML1, echinoderm microtubule associated protein like 1, [RH, Score=886, Expect=0.0]} {Mouse: ENSMUSG00000058070, Eml1, echinoderm microtubule associated protein like 1, [RH, Score=879, Expect=0.0]; ENSMUSG00000040811, Eml2, echinoderm microtubule associated protein like 2, [RH, Score=837, Expect=0.0]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [RH, Score=420, Expect=4e-131]} {Celegans: WBGene00001248, elp-1, Echinoderm microtubule-associated protein-like elp-1, [Score=326, Expect=7e-98]} {Smed: dd_Smed_v6_2493_0_2, dd_Smed_v6_2493_0_2, [RH, Score=846, Expect=0.0]} {RNA1509_58705} {RNA1310_5796.1} {RNA815_2105}

Cumulative graph for MligTC455_46931

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.083	4.754	0.93143	1.00000
RegionR2	-0.358	4.754	0.31308	0.70424
RegionR3	-0.224	4.754	0.44552	0.95889
RegionR4	0.134	4.754	0.71197	0.99708
RegionR5	0.47	4.754	0.06595	0.22839
RegionR6	-0.283	4.754	0.35262	0.93730
RegionR7	0.367	4.754	0.31137	0.94525
RegionR8	-0.024	4.754	0.96266	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.07	4.754	0.20446	0.94442
RegenerationR2	-0.014	4.754	0.95916	1.00000
RegenerationR3	-0.327	4.754	0.29315	0.72528
RegenerationR4	-0.209	4.754	0.52518	0.88195
RegenerationR5	-0.183	4.754	0.50697	0.86214
RegenerationR6	-0.293	4.754	0.36434	0.70806
RegenerationBL	-0.546	4.754	0.17001	0.49431
RegenerationTP	-0.99	4.754	0.02893	0.28602

Genes with expression patterns similar to MligTC455_46931

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46931	1052	21.92	Mlig455_017068	Neo: - Age: -	EML1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017068 {REF} {Length: 5056} {Pfam: WD domain, G-beta repeat [PF00400.34, score=97.1]; HELP motif [PF03451.16, score=89.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=36.3]} {Human: ENSG00000066629, EML1, echinoderm microtubule associated protein like 1, [RH, Score=886, Expect=0.0]} {Mouse: ENSMUSG00000058070, Eml1, echinoderm microtubule associated protein like 1, [RH, Score=879, Expect=0.0]; ENSMUSG00000040811, Eml2, echinoderm microtubule associated protein like 2, [RH, Score=837, Expect=0.0]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [RH, Score=420, Expect=4e-131]} {Celegans: WBGene00001248, elp-1, Echinoderm microtubule-associated protein-like elp-1, [Score=326, Expect=7e-98]} {Smed: dd_Smed_v6_2493_0_2, dd_Smed_v6_2493_0_2, [RH, Score=846, Expect=0.0]} {RNA1509_58705} {RNA1310_5796.1} {RNA815_2105}
2.	MligTC455_41534	994	20.71	Mlig455_000500	Neo: - Age: Up-Down-Up Region-enriched R4: 1.368/0.00790	CHKB	2.404	-	0.734	-	0.719	0.951	-	Mlig455_000500 {REF} {Length: 2071} {TRANSSPLICED} {Pfam: Choline/ethanolamine kinase [PF01633.22, score=189.5]; Phosphotransferase enzyme family [PF01636.25, score=37.1]; Ecdysteroid kinase-like family [PF02958.22, score=20.3]} {Human: ENSG00000100288, CHKB, choline kinase beta, [RH, Score=265, Expect=6e-84]} {Mouse: ENSMUSG00000022617, Chkb, choline kinase beta, [RH, Score=270, Expect=6e-86]} {Dmel: FBgn0032955, CG2201, [RH, Score=138, Expect=2e-35]} {Celegans: WBGene00000510, cka-2, Choline kinase A2, [Score=201, Expect=1e-59]} {Smed: dd_Smed_v6_10949_0_1, dd_Smed_v6_10949_0_1, [Score=97.8, Expect=2e-22]} {RNA1509_7225} {RNA1310_10539.1} {RNA815_4103}
3.	MligTC455_35502	614	12.8	Mlig455_049062	Neo: - Age: -	KDM3A	1.871	-	-	-	0.904	0.967	-	Mlig455_049062 {REF} {Length: 8028} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=29.6]} {Human: ENSG00000115548, KDM3A, lysine demethylase 3A, [Score=167, Expect=4e-41]; ENSG00000171988, JMJD1C, jumonji domain containing 1C, [Score=165, Expect=3e-40]; ENSG00000120733, KDM3B, lysine demethylase 3B, [Score=161, Expect=3e-39]} {Mouse: ENSMUSG00000053470, Kdm3a, lysine (K)-specific demethylase 3A, [Score=171, Expect=1e-42]} {Dmel: FBgn0037703, JHDM2, JmjC domain-containing histone demethylase 2, [Score=171, Expect=3e-43]} {Smed: dd_Smed_v6_2582_0_3, dd_Smed_v6_2582_0_3, [Score=195, Expect=4e-50]} {RNA1509_14994, RNA1509_15584} {RNA1310_5965.1, RNA1509_14994, RNA1509_15584} {RNA1509_14994, RNA1509_15584, RNA815_15655.1}
4.	MligTC455_35501	720	15	Mlig455_048410	Neo: - Age: Down-Up-Down	KDM3A	1.838	-	-	-	0.872	0.966	-	Mlig455_048410 {REF} {Length: 7501} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=27.2]; Anti-sigma-K factor rskA [PF10099.11, score=19.5]} {Human: ENSG00000115548, KDM3A, lysine demethylase 3A, [Score=167, Expect=4e-41]; ENSG00000171988, JMJD1C, jumonji domain containing 1C, [Score=166, Expect=2e-40]; ENSG00000120733, KDM3B, lysine demethylase 3B, [Score=162, Expect=2e-39]} {Mouse: ENSMUSG00000053470, Kdm3a, lysine (K)-specific demethylase 3A, [Score=171, Expect=1e-42]} {Dmel: FBgn0037703, JHDM2, JmjC domain-containing histone demethylase 2, [Score=171, Expect=5e-43]} {Smed: dd_Smed_v6_2582_0_3, dd_Smed_v6_2582_0_3, [Score=194, Expect=9e-50]} {RNA1509_15584} {RNA1310_5965.1} {RNA815_15655.1}
5.	MligTC455_46474	870	18.12	Mlig455_015932, Mlig455_059696	Neo: - Age: Down-Up-Down		1.799	-	-	-	-	0.829	0.970	Mlig455_015932 {REF} {Length: 2442} {TRANSSPLICED} {RNA1509_28238, RNA1509_53688} {RNA1310_20972, RNA1509_28238, RNA1509_53688} {RNA1509_28238, RNA1509_53688, RNA815_8774} Mlig455_059696 {REF} {Length: 2441} {TRANSSPLICED} {RNA1509_28238} {RNA1310_20972} {RNA815_8774}
6.	MligTC455_47123	443	9.22	Mlig455_029206	Neo: - Age: -	VPS33B	1.779	-	-	-	-	0.969	0.810	Mlig455_029206 {REF} {Length: 2889} {TRANSSPLICED} {Pfam: Sec1 family [PF00995.25, score=215.0]} {Human: ENSG00000184056, VPS33B, VPS33B, late endosome and lysosome associated, [Score=201, Expect=2e-55]; ENSG00000284946, AC068831.7, novel transcript, [Score=196, Expect=3e-54]} {Mouse: ENSMUSG00000030534, Vps33b, vacuolar protein sorting 33B, [Score=199, Expect=4e-55]} {Dmel: FBgn0000257, car, carnation, [Score=142, Expect=2e-35]} {Celegans: WBGene00015130, vps-33.1, Vacuolar protein sorting-associated protein 33A, [Score=60.1, Expect=3e-09]} {Smed: dd_Smed_v6_7337_0_1, dd_Smed_v6_7337_0_1, [Score=99.0, Expect=2e-21]} {RNA1509_52229, RNA1509_7192} {RNA1310_3145, RNA1509_52229, RNA1509_7192} {RNA1509_52229, RNA1509_7192, RNA815_5420}
7.	MligTC455_52471	566	11.79	Mlig455_048007	Neo: - Age: logFC(26M/2M)=-0.372		0.968	-	-	-	-	0.968	-	Mlig455_048007 {REF} {Length: 1197} {Pfam: Toxic anion resistance protein (TelA) [PF05816.13, score=18.2]} {RNA1509_22693} {RNA1310_30859, RNA1509_22693} {RNA1509_22693, RNA815_19803}
8.	MligTC455_19286	687	14.3	Mlig455_067672	Neo: - Age: - Region-enriched R4: 1.364/0.04890	STX12	0.963	-	-	-	0.963	-	-	Mlig455_067672 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Syntaxin-like protein [PF14523.8, score=58.2]; SNARE domain [PF05739.21, score=51.4]; Syntaxin [PF00804.27, score=26.9]} {Human: ENSG00000117758, STX12, syntaxin 12, [RH, Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000019998, Stx7, syntaxin 7, [RH, Score=130, Expect=3e-36]; ENSMUSG00000028879, Stx12, syntaxin 12, [RH, Score=126, Expect=1e-34]} {Dmel: FBgn0267849, Syx7, Syntaxin 7, [RH, Score=114, Expect=7e-30]} {Celegans: WBGene00009478, syx-7, SYntaXin, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_4152_0_1, dd_Smed_v6_4152_0_1, [RH, Score=91.3, Expect=6e-22]} {RNA1509_10756, RNA1509_33541, RNA1509_54323} {RNA1310_6233, RNA1509_10756, RNA1509_33541, RNA1509_54323} {RNA1509_10756, RNA1509_33541, RNA1509_54323, RNA815_11207}
9.	MligTC455_37339	540	11.24	Mlig455_025829	Neo: - Age: -	NR5A2	0.962	-	-	-	-	-	0.962	Mlig455_025829 {REF} {Length: 5905} {TRANSSPLICED} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=79.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=18.9]} {Human: ENSG00000116833, NR5A2, nuclear receptor subfamily 5 group A member 2, [RH, Score=133, Expect=4e-33]} {Mouse: ENSMUSG00000026398, Nr5a2, nuclear receptor subfamily 5, group A, member 2, [RH, Score=142, Expect=3e-36]} {Dmel: FBgn0001078, ftz-f1, ftz transcription factor 1, [Score=121, Expect=9e-29]} {Smed: dd_Smed_v6_7551_0_1, dd_Smed_v6_7551_0_1, [RH, Score=127, Expect=6e-31]} {RNA1509_18060, RNA1509_32136, RNA1509_33357, RNA1509_46535, RNA1509_50621, RNA1509_59801, RNA1509_8315} {RNA1310_13358, RNA1509_18060, RNA1509_32136, RNA1509_33357, RNA1509_46535, RNA1509_50621, RNA1509_59801, RNA1509_8315} {RNA1509_18060, RNA1509_32136, RNA1509_33357, RNA1509_46535, RNA1509_50621, RNA1509_59801, RNA1509_8315, RNA815_9164}
10.	MligTC455_37757	611	12.72	Mlig455_049395	Neo: - Age: Up-Down-Up		0.958	-	-	-	-	-	0.958	Mlig455_049395 {REF} {Length: 2333} {TRANSSPLICED} {RNA1509_19182} {RNA1310_10020} {RNA815_5696}
11.	MligTC455_41406	411	8.56	Mlig455_003675	Neo: - Age: -	PIK3R4	0.955	-	-	-	-	0.955	-	Mlig455_003675 {REF} {Length: 5356} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=47.6]; Protein kinase domain [PF00069.27, score=47.0]; WD domain, G-beta repeat [PF00400.34, score=34.5]; HEAT repeats [PF13646.8, score=32.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=26.4]; HEAT-like repeat [PF13513.8, score=23.4]; Vacuolar 14 Fab1-binding region [PF12755.9, score=20.7]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=20.6]} {Human: ENSG00000196455, PIK3R4, phosphoinositide-3-kinase regulatory subunit 4, [Score=656, Expect=0.0]} {Mouse: ENSMUSG00000032571, Pik3r4, phosphoinositide-3-kinase regulatory subunit 4, [Score=646, Expect=0.0]} {Dmel: FBgn0260935, Vps15, Vacuolar protein sorting 15, [RH, Score=581, Expect=0.0]} {Celegans: WBGene00014151, vps-15, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=275, Expect=4e-75]} {Smed: dd_Smed_v6_6060_0_1, dd_Smed_v6_6060_0_1, [RH, Score=330, Expect=6e-93]} {RNA1509_5482} {RNA1310_999} {RNA815_1679.1}
12.	MligTC455_35071	306	6.38	Mlig455_050303	Neo: - Age: Up-Down-Down	HECTD2	0.953	-	-	-	-	-	0.953	Mlig455_050303 {REF} {Length: 5963} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=276.3]; zinc-ribbon [PF14369.8, score=20.7]} {Human: ENSG00000165338, HECTD2, HECT domain E3 ubiquitin protein ligase 2, [RH, Score=709, Expect=0.0]} {Mouse: ENSMUSG00000041180, Hectd2, HECT domain E3 ubiquitin protein ligase 2, [RH, Score=691, Expect=0.0]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=281, Expect=1e-80]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [Score=208, Expect=1e-58]} {Smed: dd_Smed_v6_48732_0_1, dd_Smed_v6_48732_0_1, [Score=252, Expect=3e-75]} {RNA1509_32220, RNA1509_38828} {RNA1310_6009.1, RNA1509_32220, RNA1509_38828} {RNA1509_32220, RNA1509_38828, RNA815_1906.1}
13.	MligTC455_42726	280	5.84	Mlig455_028160	Neo: - Age: -	VPS54	0.951	-	-	-	-	-	0.951	Mlig455_028160 {REF} {Length: 5842} {TRANSSPLICED} {Pfam: Vps54-like protein [PF07928.14, score=120.4]; Vacuolar-sorting protein 54, of GARP complex [PF10475.11, score=58.7]} {Human: ENSG00000143952, VPS54, VPS54, GARP complex subunit, [RH, Score=271, Expect=2e-77]} {Mouse: ENSMUSG00000020128, Vps54, VPS54 GARP complex subunit, [RH, Score=268, Expect=1e-76]} {Dmel: FBgn0011232, scat, scattered, [RH, Score=412, Expect=1e-128]} {Celegans: WBGene00006934, vps-54, Vacuolar protein sorting-associated protein 54, [RH, Score=174, Expect=4e-44]} {Smed: dd_Smed_v6_10319_0_1, dd_Smed_v6_10319_0_1, [RH, Score=432, Expect=1e-135]} {RNA1509_9367} {RNA1310_5688.1, RNA1509_9367} {RNA1509_9367, RNA815_15154}

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