Data search


search
Exact
Search

Results for MligTC455_46939

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46939 1833 38.18 Mlig455_018157, Mlig455_018176

Neo: -

Age: -

Region-enriched R4: 1.314/0.00030

TMEM45B

Mlig455_018157 {REF} {Length: 3193} {TRANSSPLICED} {Pfam: Family of unknown function (DUF716) [PF04819.14, score=94.1]} {Human: ENSG00000151715, TMEM45B, transmembrane protein 45B, [RH, Score=124, Expect=4e-33]} {Mouse: ENSMUSG00000041737, Tmem45b, transmembrane protein 45b, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_1542_0_1, dd_Smed_v6_1542_0_1, [RH, Score=132, Expect=2e-36]} {RNA1509_34983} {RNA1310_25344, RNA1509_34983} {RNA1509_34983, RNA815_10825}

Mlig455_018176 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: Family of unknown function (DUF716) [PF04819.14, score=94.1]} {Human: ENSG00000151715, TMEM45B, transmembrane protein 45B, [RH, Score=124, Expect=4e-33]} {Mouse: ENSMUSG00000041737, Tmem45b, transmembrane protein 45b, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_1542_0_1, dd_Smed_v6_1542_0_1, [RH, Score=132, Expect=2e-36]} {RNA1509_23620, RNA1509_34983} {RNA1310_25344, RNA1509_23620} {RNA1509_23620, RNA815_10825}

Cumulative graph for MligTC455_46939

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.015 5.512 0.98548 1.00000
RegionR2 -0.626 5.512 0.03832 0.22700
RegionR3 0.459 5.512 0.04870 0.38556
RegionR4 1.314 5.512 0.00001 0.00030
RegionR5 0.662 5.512 0.00286 0.02276
RegionR6 0.005 5.512 0.98479 1.00000
RegionR7 -1.045 5.512 0.00448 0.10178
RegionR8 -0.784 5.512 0.07331 0.51760

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.412 5.512 0.66314 1.00000
RegenerationR2 -0.202 5.512 0.41833 0.82622
RegenerationR3 -0.376 5.512 0.14883 0.57766
RegenerationR4 -0.07 5.512 0.79823 0.98564
RegenerationR5 0.015 5.512 0.95248 1.00000
RegenerationR6 0.074 5.512 0.79111 0.97305
RegenerationBL 0.328 5.512 0.33940 0.70614
RegenerationTP -0.373 5.512 0.37750 0.81318


Genes with expression patterns similar to MligTC455_46939

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46939 1833 38.18 Mlig455_018157, Mlig455_018176

Neo: -

Age: -

Region-enriched R4: 1.314/0.00030

TMEM45B 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_018157 {REF} {Length: 3193} {TRANSSPLICED} {Pfam: Family of unknown function (DUF716) [PF04819.14, score=94.1]} {Human: ENSG00000151715, TMEM45B, transmembrane protein 45B, [RH, Score=124, Expect=4e-33]} {Mouse: ENSMUSG00000041737, Tmem45b, transmembrane protein 45b, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_1542_0_1, dd_Smed_v6_1542_0_1, [RH, Score=132, Expect=2e-36]} {RNA1509_34983} {RNA1310_25344, RNA1509_34983} {RNA1509_34983, RNA815_10825}

Mlig455_018176 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: Family of unknown function (DUF716) [PF04819.14, score=94.1]} {Human: ENSG00000151715, TMEM45B, transmembrane protein 45B, [RH, Score=124, Expect=4e-33]} {Mouse: ENSMUSG00000041737, Tmem45b, transmembrane protein 45b, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_1542_0_1, dd_Smed_v6_1542_0_1, [RH, Score=132, Expect=2e-36]} {RNA1509_23620, RNA1509_34983} {RNA1310_25344, RNA1509_23620} {RNA1509_23620, RNA815_10825}
2. MligTC455_34718 17741 369.61 Mlig455_032180, Mlig455_051197

Neo: -

Age: -

Region-enriched R4: 1.171/0.00001

ATP5MG 2.695 - - - 0.950 0.851 0.894

Mlig455_032180 {REF} {Length: 743} {TRANSSPLICED} {Pfam: Mitochondrial ATP synthase g subunit [PF04718.17, score=73.0]} {Human: ENSG00000167283, ATP5MG, ATP synthase membrane subunit g, [RH, Score=89.7, Expect=3e-24]} {Mouse: ENSMUSG00000038717, Atp5l, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, [RH, Score=87.4, Expect=2e-23]; ENSMUSG00000096486, Gm5426, predicted pseudogene 5426, [RH, Score=85.5, Expect=1e-22]} {Dmel: FBgn0010612, ATPsynG, ATP synthase, [RH, Score=82.0, Expect=1e-21]} {Celegans: WBGene00000209, asg-1, Probable ATP synthase subunit g 1, mitochondrial, [RH, Score=66.6, Expect=2e-15]} {Smed: dd_Smed_v6_428_0_1, dd_Smed_v6_428_0_1, [RH, Score=88.2, Expect=4e-24]} {RNA1509_10193, RNA1509_4151, RNA1509_4154, RNA1509_8268} {RNA1310_44478.1, RNA1509_10193, RNA1509_4151, RNA1509_4154, RNA1509_8268} {RNA1509_10193, RNA1509_4151, RNA1509_4154, RNA1509_8268, RNA815_24565.1}

Mlig455_051197 {REF} {Length: 738} {TRANSSPLICED} {Pfam: Mitochondrial ATP synthase g subunit [PF04718.17, score=73.0]} {Human: ENSG00000167283, ATP5MG, ATP synthase membrane subunit g, [RH, Score=89.7, Expect=3e-24]} {Mouse: ENSMUSG00000038717, Atp5l, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, [RH, Score=87.4, Expect=2e-23]; ENSMUSG00000096486, Gm5426, predicted pseudogene 5426, [RH, Score=85.5, Expect=1e-22]} {Dmel: FBgn0010612, ATPsynG, ATP synthase, [RH, Score=82.0, Expect=1e-21]} {Celegans: WBGene00000209, asg-1, Probable ATP synthase subunit g 1, mitochondrial, [RH, Score=66.6, Expect=2e-15]} {Smed: dd_Smed_v6_428_0_1, dd_Smed_v6_428_0_1, [RH, Score=88.2, Expect=4e-24]} {RNA1509_11893, RNA1509_6284} {RNA1310_44478.1, RNA1509_11893, RNA1509_6284} {RNA1509_11893, RNA1509_6284, RNA815_24565.1}
3. MligTC455_42236 1269 26.44 Mlig455_046349

Neo: -

Age: -

Region-specific R4: 2.062

Region-enriched R4: 2.061/0.00000

1.775 - - - 0.973 - 0.802 Mlig455_046349 {REF} {Length: 1216} {TRANSSPLICED} {Pfam: Mitochondrial and peroxisomal fission factor Mff [PF05644.13, score=64.3]} {RNA1509_20451} {RNA1310_22885} {RNA815_11405}
4. MligTC455_43720 479 9.99 Mlig455_015527

Neo: -

Age: -

Region-enriched R3: 1.755/0.04928

BCLAF1 0.957 - - 0.957 - - - Mlig455_015527 {REF} {Length: 2478} {TRANSSPLICED} {Pfam: CASC3/Barentsz eIF4AIII binding [PF09405.12, score=23.9]} {Human: ENSG00000029363, BCLAF1, BCL2 associated transcription factor 1, [Score=56.6, Expect=3e-08]} {Mouse: ENSMUSG00000037608, Bclaf1, BCL2-associated transcription factor 1, [Score=61.6, Expect=4e-10]} {RNA1509_26662, RNA1509_47388, RNA1509_53993} {RNA1310_20784, RNA1509_26662, RNA1509_47388, RNA1509_53993} {RNA1509_26662, RNA1509_47388, RNA1509_53993, RNA815_16847}
5. MligTC455_12221 188 3.92 Mlig455_031615

Neo: -

Age: -

0.954 - - 0.954 - - - Mlig455_031615 {REF} {Length: 1695} {RNA1310_26664} {RNA815_18719}
6. MligTC455_53554 1642 34.2 Mlig455_006993, Mlig455_017991

Neo: -

Age: -

Region-enriched R4: 2.031/0.00007

SLC25A12 0.954 - - - 0.954 - -

Mlig455_006993 {REF} {Length: 4853} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=230.1]; EF-hand domain pair [PF13499.8, score=45.4]; EF hand [PF00036.34, score=43.4]; EF-hand domain [PF13405.8, score=38.2]; EF-hand domain pair [PF13833.8, score=37.9]; EF hand [PF13202.8, score=34.8]} {Human: ENSG00000115840, SLC25A12, solute carrier family 25 member 12, [RH, Score=760, Expect=0.0]; ENSG00000004864, SLC25A13, solute carrier family 25 member 13, [RH, Score=754, Expect=0.0]} {Mouse: ENSMUSG00000027010, Slc25a12, solute carrier family 25 (mitochondrial carrier, Aralar), member 12, [RH, Score=759, Expect=0.0]; ENSMUSG00000015112, Slc25a13, solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13, [RH, Score=758, Expect=0.0]} {Dmel: FBgn0028646, aralar1, [RH, Score=752, Expect=0.0]} {Celegans: WBGene00019326, K02F3.2, Probable calcium-binding mitochondrial carrier K02F3.2, [RH, Score=649, Expect=0.0]} {Smed: dd_Smed_v6_5641_0_2, dd_Smed_v6_5641_0_2, [RH, Score=827, Expect=0.0]} {RNA1509_2457, RNA1509_30105, RNA1509_57024} {RNA1310_9730, RNA1509_2457, RNA1509_30105, RNA1509_57024} {RNA1509_2457, RNA1509_30105, RNA1509_57024, RNA815_3698}

Mlig455_017991 {REF} {Length: 4512} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=230.1]; EF hand [PF00036.34, score=43.7]; EF-hand domain pair [PF13499.8, score=43.3]; EF-hand domain pair [PF13833.8, score=38.9]; EF-hand domain [PF13405.8, score=37.5]; EF hand [PF13202.8, score=33.4]} {Human: ENSG00000115840, SLC25A12, solute carrier family 25 member 12, [RH, Score=761, Expect=0.0]; ENSG00000004864, SLC25A13, solute carrier family 25 member 13, [RH, Score=756, Expect=0.0]} {Mouse: ENSMUSG00000027010, Slc25a12, solute carrier family 25 (mitochondrial carrier, Aralar), member 12, [RH, Score=759, Expect=0.0]; ENSMUSG00000015112, Slc25a13, solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13, [RH, Score=758, Expect=0.0]} {Dmel: FBgn0028646, aralar1, [RH, Score=753, Expect=0.0]} {Celegans: WBGene00019326, K02F3.2, Probable calcium-binding mitochondrial carrier K02F3.2, [RH, Score=650, Expect=0.0]} {Smed: dd_Smed_v6_5641_0_2, dd_Smed_v6_5641_0_2, [RH, Score=827, Expect=0.0]} {RNA1509_2457, RNA1509_43887} {RNA1310_9730, RNA1509_43887} {RNA1509_43887, RNA815_3698}
7. MligTC455_46902 215 4.48 Mlig455_051073

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.620

Region-enriched R4: 2.242/0.03031
Region-enriched R5: 1.994/0.02163

0.952 - - - 0.952 - - Mlig455_051073 {REF} {Length: 1058} {TRANSSPLICED} {Pfam: rRNA processing [PF08524.13, score=39.6]} {Dmel: FBgn0039764, CG15535, [Score=43.1, Expect=1e-05]} {RNA1509_51002, RNA1509_53077} {RNA1310_29171.1, RNA1509_51002, RNA1509_53077} {RNA1509_51002, RNA1509_53077, RNA815_30697}
8. MligTC455_43391 666 13.87 Mlig455_002989

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_002989 {REF} {Length: 2680} {TRANSSPLICED} {Mouse: ENSMUSG00000002343, Armc6, armadillo repeat containing 6, [RH, Score=120, Expect=3e-29]} {Dmel: FBgn0034315, CG5721, [RH, Score=113, Expect=8e-27]} {Smed: dd_Smed_v6_1357_0_1, dd_Smed_v6_1357_0_1, [RH, Score=145, Expect=2e-38]} {RNA1509_15943, RNA1509_20432, RNA1509_31191, RNA1509_48496} {RNA1310_17098.1, RNA1509_15943, RNA1509_20432, RNA1509_31191, RNA1509_48496} {RNA1509_15943, RNA1509_20432, RNA1509_31191, RNA1509_48496, RNA815_7466}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA