Data search


search
Exact
Search

Results for MligTC455_34718

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34718 17741 369.61 Mlig455_032180, Mlig455_051197

Neo: -

Age: -

Region-enriched R4: 1.171/0.00001

ATP5MG

Mlig455_032180 {REF} {Length: 743} {TRANSSPLICED} {Pfam: Mitochondrial ATP synthase g subunit [PF04718.17, score=73.0]} {Human: ENSG00000167283, ATP5MG, ATP synthase membrane subunit g, [RH, Score=89.7, Expect=3e-24]} {Mouse: ENSMUSG00000038717, Atp5l, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, [RH, Score=87.4, Expect=2e-23]; ENSMUSG00000096486, Gm5426, predicted pseudogene 5426, [RH, Score=85.5, Expect=1e-22]} {Dmel: FBgn0010612, ATPsynG, ATP synthase, [RH, Score=82.0, Expect=1e-21]} {Celegans: WBGene00000209, asg-1, Probable ATP synthase subunit g 1, mitochondrial, [RH, Score=66.6, Expect=2e-15]} {Smed: dd_Smed_v6_428_0_1, dd_Smed_v6_428_0_1, [RH, Score=88.2, Expect=4e-24]} {RNA1509_10193, RNA1509_4151, RNA1509_4154, RNA1509_8268} {RNA1310_44478.1, RNA1509_10193, RNA1509_4151, RNA1509_4154, RNA1509_8268} {RNA1509_10193, RNA1509_4151, RNA1509_4154, RNA1509_8268, RNA815_24565.1}

Mlig455_051197 {REF} {Length: 738} {TRANSSPLICED} {Pfam: Mitochondrial ATP synthase g subunit [PF04718.17, score=73.0]} {Human: ENSG00000167283, ATP5MG, ATP synthase membrane subunit g, [RH, Score=89.7, Expect=3e-24]} {Mouse: ENSMUSG00000038717, Atp5l, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, [RH, Score=87.4, Expect=2e-23]; ENSMUSG00000096486, Gm5426, predicted pseudogene 5426, [RH, Score=85.5, Expect=1e-22]} {Dmel: FBgn0010612, ATPsynG, ATP synthase, [RH, Score=82.0, Expect=1e-21]} {Celegans: WBGene00000209, asg-1, Probable ATP synthase subunit g 1, mitochondrial, [RH, Score=66.6, Expect=2e-15]} {Smed: dd_Smed_v6_428_0_1, dd_Smed_v6_428_0_1, [RH, Score=88.2, Expect=4e-24]} {RNA1509_11893, RNA1509_6284} {RNA1310_44478.1, RNA1509_11893, RNA1509_6284} {RNA1509_11893, RNA1509_6284, RNA815_24565.1}

Cumulative graph for MligTC455_34718

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.563 8.618 0.08433 0.63190
RegionR2 -0.6 8.618 0.01128 0.10839
RegionR3 0.31 8.618 0.11662 0.59273
RegionR4 1.171 8.618 0.00000 0.00001
RegionR5 0.597 8.618 0.00173 0.01569
RegionR6 0.273 8.618 0.16960 0.72641
RegionR7 -0.327 8.618 0.12235 0.66049
RegionR8 -0.861 8.618 0.00051 0.02845

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.209 8.618 0.60531 1.00000
RegenerationR2 -0.416 8.618 0.10100 0.50243
RegenerationR3 -0.568 8.618 0.02752 0.29819
RegenerationR4 -0.675 8.618 0.01139 0.16300
RegenerationR5 -0.398 8.618 0.11985 0.51887
RegenerationR6 -0.345 8.618 0.17961 0.51428
RegenerationBL -0.154 8.618 0.50377 0.86798
RegenerationTP -0.569 8.618 0.02639 0.27345


Genes with expression patterns similar to MligTC455_34718

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34718 17741 369.61 Mlig455_032180, Mlig455_051197

Neo: -

Age: -

Region-enriched R4: 1.171/0.00001

ATP5MG 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_032180 {REF} {Length: 743} {TRANSSPLICED} {Pfam: Mitochondrial ATP synthase g subunit [PF04718.17, score=73.0]} {Human: ENSG00000167283, ATP5MG, ATP synthase membrane subunit g, [RH, Score=89.7, Expect=3e-24]} {Mouse: ENSMUSG00000038717, Atp5l, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, [RH, Score=87.4, Expect=2e-23]; ENSMUSG00000096486, Gm5426, predicted pseudogene 5426, [RH, Score=85.5, Expect=1e-22]} {Dmel: FBgn0010612, ATPsynG, ATP synthase, [RH, Score=82.0, Expect=1e-21]} {Celegans: WBGene00000209, asg-1, Probable ATP synthase subunit g 1, mitochondrial, [RH, Score=66.6, Expect=2e-15]} {Smed: dd_Smed_v6_428_0_1, dd_Smed_v6_428_0_1, [RH, Score=88.2, Expect=4e-24]} {RNA1509_10193, RNA1509_4151, RNA1509_4154, RNA1509_8268} {RNA1310_44478.1, RNA1509_10193, RNA1509_4151, RNA1509_4154, RNA1509_8268} {RNA1509_10193, RNA1509_4151, RNA1509_4154, RNA1509_8268, RNA815_24565.1}

Mlig455_051197 {REF} {Length: 738} {TRANSSPLICED} {Pfam: Mitochondrial ATP synthase g subunit [PF04718.17, score=73.0]} {Human: ENSG00000167283, ATP5MG, ATP synthase membrane subunit g, [RH, Score=89.7, Expect=3e-24]} {Mouse: ENSMUSG00000038717, Atp5l, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, [RH, Score=87.4, Expect=2e-23]; ENSMUSG00000096486, Gm5426, predicted pseudogene 5426, [RH, Score=85.5, Expect=1e-22]} {Dmel: FBgn0010612, ATPsynG, ATP synthase, [RH, Score=82.0, Expect=1e-21]} {Celegans: WBGene00000209, asg-1, Probable ATP synthase subunit g 1, mitochondrial, [RH, Score=66.6, Expect=2e-15]} {Smed: dd_Smed_v6_428_0_1, dd_Smed_v6_428_0_1, [RH, Score=88.2, Expect=4e-24]} {RNA1509_11893, RNA1509_6284} {RNA1310_44478.1, RNA1509_11893, RNA1509_6284} {RNA1509_11893, RNA1509_6284, RNA815_24565.1}
2. MligTC455_46939 1833 38.18 Mlig455_018157, Mlig455_018176

Neo: -

Age: -

Region-enriched R4: 1.314/0.00030

TMEM45B 2.695 - - - 0.950 0.851 0.894

Mlig455_018157 {REF} {Length: 3193} {TRANSSPLICED} {Pfam: Family of unknown function (DUF716) [PF04819.14, score=94.1]} {Human: ENSG00000151715, TMEM45B, transmembrane protein 45B, [RH, Score=124, Expect=4e-33]} {Mouse: ENSMUSG00000041737, Tmem45b, transmembrane protein 45b, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_1542_0_1, dd_Smed_v6_1542_0_1, [RH, Score=132, Expect=2e-36]} {RNA1509_34983} {RNA1310_25344, RNA1509_34983} {RNA1509_34983, RNA815_10825}

Mlig455_018176 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: Family of unknown function (DUF716) [PF04819.14, score=94.1]} {Human: ENSG00000151715, TMEM45B, transmembrane protein 45B, [RH, Score=124, Expect=4e-33]} {Mouse: ENSMUSG00000041737, Tmem45b, transmembrane protein 45b, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_1542_0_1, dd_Smed_v6_1542_0_1, [RH, Score=132, Expect=2e-36]} {RNA1509_23620, RNA1509_34983} {RNA1310_25344, RNA1509_23620} {RNA1509_23620, RNA815_10825}
3. MligTC455_42236 1269 26.44 Mlig455_046349

Neo: -

Age: -

Region-specific R4: 2.062

Region-enriched R4: 2.061/0.00000

1.778 - - - 0.958 - 0.820 Mlig455_046349 {REF} {Length: 1216} {TRANSSPLICED} {Pfam: Mitochondrial and peroxisomal fission factor Mff [PF05644.13, score=64.3]} {RNA1509_20451} {RNA1310_22885} {RNA815_11405}
4. MligTC455_25637 5872 122.33 Mlig455_007197

Neo: -

Age: logFC(26M/2M)=0.857

EEF2 1.665 - - - 0.959 0.706 - Mlig455_007197 {REF} {Length: 4632} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=215.4]; Elongation factor G, domain IV [PF03764.20, score=112.0]; Elongation factor G C-terminus [PF00679.26, score=80.3]; Elongation Factor G, domain III [PF14492.8, score=52.2]; Elongation factor Tu domain 2 [PF03144.27, score=32.6]; 50S ribosome-binding GTPase [PF01926.25, score=25.6]} {Human: ENSG00000167658, EEF2, eukaryotic translation elongation factor 2, [RH, Score=1315, Expect=0.0]} {Mouse: ENSMUSG00000034994, Eef2, eukaryotic translation elongation factor 2, [RH, Score=1314, Expect=0.0]} {Dmel: FBgn0000559, eEF2, eukaryotic translation elongation factor 2, [RH, Score=1305, Expect=0.0]} {Celegans: WBGene00001167, eef-2, Elongation factor 2, [RH, Score=1342, Expect=0.0]} {Smed: dd_Smed_v6_186_0_1, dd_Smed_v6_186_0_1, [RH, Score=1323, Expect=0.0]} {RNA1509_42840} {RNA1310_4133} {RNA815_1555.1}
5. MligTC455_44989 6960 145 Mlig455_069324

Neo: -

Age: logFC(26M/2M)=0.260

Region-enriched R4: 1.074/0.01168

GYG1 0.972 - - - 0.972 - - Mlig455_069324 {REF} {Length: 3749} {TRANSSPLICED} {Pfam: Glycosyl transferase family 8 [PF01501.22, score=86.9]; Nucleotide-diphospho-sugar transferase [PF03407.18, score=19.4]} {Human: ENSG00000163754, GYG1, glycogenin 1, [RH, Score=306, Expect=7e-99]} {Mouse: ENSMUSG00000019528, Gyg, glycogenin, [RH, Score=311, Expect=2e-100]} {Dmel: FBgn0265191, Glycogenin, [RH, Score=303, Expect=1e-93]} {Celegans: WBGene00006863, gyg-1, Glycogenin-1, [RH, Score=258, Expect=1e-79]} {Smed: dd_Smed_v6_647_1_1, dd_Smed_v6_647_1_1, [RH, Score=362, Expect=2e-121]} {RNA1509_31124, RNA1509_511} {RNA1310_1979.3, RNA1509_31124} {RNA1509_31124, RNA815_13036.1}
6. MligTC455_53554 1642 34.2 Mlig455_006993, Mlig455_017991

Neo: -

Age: -

Region-enriched R4: 2.031/0.00007

SLC25A12 0.958 - - - 0.958 - -

Mlig455_006993 {REF} {Length: 4853} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=230.1]; EF-hand domain pair [PF13499.8, score=45.4]; EF hand [PF00036.34, score=43.4]; EF-hand domain [PF13405.8, score=38.2]; EF-hand domain pair [PF13833.8, score=37.9]; EF hand [PF13202.8, score=34.8]} {Human: ENSG00000115840, SLC25A12, solute carrier family 25 member 12, [RH, Score=760, Expect=0.0]; ENSG00000004864, SLC25A13, solute carrier family 25 member 13, [RH, Score=754, Expect=0.0]} {Mouse: ENSMUSG00000027010, Slc25a12, solute carrier family 25 (mitochondrial carrier, Aralar), member 12, [RH, Score=759, Expect=0.0]; ENSMUSG00000015112, Slc25a13, solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13, [RH, Score=758, Expect=0.0]} {Dmel: FBgn0028646, aralar1, [RH, Score=752, Expect=0.0]} {Celegans: WBGene00019326, K02F3.2, Probable calcium-binding mitochondrial carrier K02F3.2, [RH, Score=649, Expect=0.0]} {Smed: dd_Smed_v6_5641_0_2, dd_Smed_v6_5641_0_2, [RH, Score=827, Expect=0.0]} {RNA1509_2457, RNA1509_30105, RNA1509_57024} {RNA1310_9730, RNA1509_2457, RNA1509_30105, RNA1509_57024} {RNA1509_2457, RNA1509_30105, RNA1509_57024, RNA815_3698}

Mlig455_017991 {REF} {Length: 4512} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=230.1]; EF hand [PF00036.34, score=43.7]; EF-hand domain pair [PF13499.8, score=43.3]; EF-hand domain pair [PF13833.8, score=38.9]; EF-hand domain [PF13405.8, score=37.5]; EF hand [PF13202.8, score=33.4]} {Human: ENSG00000115840, SLC25A12, solute carrier family 25 member 12, [RH, Score=761, Expect=0.0]; ENSG00000004864, SLC25A13, solute carrier family 25 member 13, [RH, Score=756, Expect=0.0]} {Mouse: ENSMUSG00000027010, Slc25a12, solute carrier family 25 (mitochondrial carrier, Aralar), member 12, [RH, Score=759, Expect=0.0]; ENSMUSG00000015112, Slc25a13, solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13, [RH, Score=758, Expect=0.0]} {Dmel: FBgn0028646, aralar1, [RH, Score=753, Expect=0.0]} {Celegans: WBGene00019326, K02F3.2, Probable calcium-binding mitochondrial carrier K02F3.2, [RH, Score=650, Expect=0.0]} {Smed: dd_Smed_v6_5641_0_2, dd_Smed_v6_5641_0_2, [RH, Score=827, Expect=0.0]} {RNA1509_2457, RNA1509_43887} {RNA1310_9730, RNA1509_43887} {RNA1509_43887, RNA815_3698}
7. MligTC455_44988 6581 137.1 Mlig455_047291

Neo: -

Age: logFC(26M/2M)=0.221

GYG2 0.953 - - - 0.953 - - Mlig455_047291 {REF} {Length: 3360} {TRANSSPLICED} {Pfam: Glycosyl transferase family 8 [PF01501.22, score=42.4]} {Human: ENSG00000056998, GYG2, glycogenin 2, [Score=151, Expect=4e-40]} {Mouse: ENSMUSG00000019528, Gyg, glycogenin, [Score=140, Expect=4e-37]} {Dmel: FBgn0265191, Glycogenin, [Score=105, Expect=7e-25]} {Celegans: WBGene00006863, gyg-1, Glycogenin-1, [Score=104, Expect=8e-25]} {Smed: dd_Smed_v6_647_1_1, dd_Smed_v6_647_1_1, [Score=119, Expect=8e-30]} {RNA1509_511} {RNA1310_14272.1} {RNA815_13036.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA