Data search


search
Exact
Search

Results for MligTC455_46991

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46991 4686 97.63 Mlig455_022426

Neo: -

Age: logFC(26M/2M)=0.290

NDUFA9 Mlig455_022426 {REF} {Length: 1638} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=39.5]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=32.2]; NmrA-like family [PF05368.15, score=27.3]; NAD(P)H-binding [PF13460.8, score=23.5]; RmlD substrate binding domain [PF04321.19, score=21.1]} {Human: ENSG00000139180, NDUFA9, NADH:ubiquinone oxidoreductase subunit A9, [RH, Score=283, Expect=4e-92]} {Mouse: ENSMUSG00000000399, Ndufa9, NADH:ubiquinone oxidoreductase subunit A9, [RH, Score=266, Expect=1e-85]} {Dmel: FBgn0037001, ND-39, NADH dehydrogenase (ubiquinone) 39 kDa subunit, [RH, Score=343, Expect=3e-115]} {Celegans: WBGene00021800, Y53G8AL.2, [RH, Score=271, Expect=6e-87]} {Smed: dd_Smed_v6_1524_0_1, dd_Smed_v6_1524_0_1, [RH, Score=376, Expect=2e-128]} {RNA1509_19609, RNA1509_2137, RNA1509_6100} {RNA1310_20129.1, RNA1509_19609, RNA1509_6100} {RNA1509_19609, RNA1509_6100, RNA815_7840.1}

Cumulative graph for MligTC455_46991

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.725 6.685 0.12904 0.72667
RegionR2 0.049 6.685 0.83642 1.00000
RegionR3 0.273 6.685 0.16222 0.68192
RegionR4 0.745 6.685 0.00056 0.00660
RegionR5 0.57 6.685 0.00157 0.01447
RegionR6 -0.082 6.685 0.68774 1.00000
RegionR7 -0.246 6.685 0.32421 0.95890
RegionR8 -0.583 6.685 0.06596 0.49516

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.114 6.685 0.86286 1.00000
RegenerationR2 0.149 6.685 0.49001 0.86755
RegenerationR3 0.294 6.685 0.19779 0.63286
RegenerationR4 0.016 6.685 0.94546 1.00000
RegenerationR5 -0.02 6.685 0.92485 1.00000
RegenerationR6 0.403 6.685 0.08680 0.36846
RegenerationBL 0.515 6.685 0.03474 0.20968
RegenerationTP 0.621 6.685 0.02272 0.25604


Genes with expression patterns similar to MligTC455_46991

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46991 4686 97.63 Mlig455_022426

Neo: -

Age: logFC(26M/2M)=0.290

NDUFA9 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_022426 {REF} {Length: 1638} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=39.5]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=32.2]; NmrA-like family [PF05368.15, score=27.3]; NAD(P)H-binding [PF13460.8, score=23.5]; RmlD substrate binding domain [PF04321.19, score=21.1]} {Human: ENSG00000139180, NDUFA9, NADH:ubiquinone oxidoreductase subunit A9, [RH, Score=283, Expect=4e-92]} {Mouse: ENSMUSG00000000399, Ndufa9, NADH:ubiquinone oxidoreductase subunit A9, [RH, Score=266, Expect=1e-85]} {Dmel: FBgn0037001, ND-39, NADH dehydrogenase (ubiquinone) 39 kDa subunit, [RH, Score=343, Expect=3e-115]} {Celegans: WBGene00021800, Y53G8AL.2, [RH, Score=271, Expect=6e-87]} {Smed: dd_Smed_v6_1524_0_1, dd_Smed_v6_1524_0_1, [RH, Score=376, Expect=2e-128]} {RNA1509_19609, RNA1509_2137, RNA1509_6100} {RNA1310_20129.1, RNA1509_19609, RNA1509_6100} {RNA1509_19609, RNA1509_6100, RNA815_7840.1}
2. MligTC455_46992 4635 96.56 Mlig455_031780

Neo: -

Age: -

NDUFA9 5.992 0.999 0.998 0.999 0.999 0.998 0.999 Mlig455_031780 {REF} {Length: 1431} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=39.5]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=32.2]; NmrA-like family [PF05368.15, score=27.3]; NAD(P)H-binding [PF13460.8, score=23.5]; RmlD substrate binding domain [PF04321.19, score=21.1]} {Human: ENSG00000139180, NDUFA9, NADH:ubiquinone oxidoreductase subunit A9, [RH, Score=284, Expect=4e-92]} {Mouse: ENSMUSG00000000399, Ndufa9, NADH:ubiquinone oxidoreductase subunit A9, [RH, Score=267, Expect=6e-86]} {Dmel: FBgn0037001, ND-39, NADH dehydrogenase (ubiquinone) 39 kDa subunit, [RH, Score=343, Expect=2e-115]} {Celegans: WBGene00021800, Y53G8AL.2, [RH, Score=270, Expect=2e-86]} {Smed: dd_Smed_v6_1524_0_1, dd_Smed_v6_1524_0_1, [RH, Score=375, Expect=3e-128]} {RNA1509_2137} {RNA1310_20129.1} {RNA815_7840.1}
3. MligTC455_19057 1798 37.45 Mlig455_021799

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.243/0.00001

BYSL 1.666 - - - 0.956 - 0.710 Mlig455_021799 {REF} {Length: 1689} {Pfam: Bystin [PF05291.13, score=267.9]} {Human: ENSG00000112578, BYSL, bystin like, [RH, Score=236, Expect=2e-72]} {Mouse: ENSMUSG00000023988, Bysl, bystin-like, [RH, Score=232, Expect=4e-71]} {Dmel: FBgn0010292, bys, by S6, [RH, Score=211, Expect=2e-63]} {Celegans: WBGene00000276, byn-1, Cell adhesion protein byn-1, [RH, Score=204, Expect=1e-60]} {Smed: dd_Smed_v6_5966_0_1, dd_Smed_v6_5966_0_1, [RH, Score=163, Expect=9e-46]} {RNA1509_13589, RNA1509_26994, RNA1509_32855, RNA1509_33076, RNA1509_44724} {RNA1310_12003.3, RNA1509_13589, RNA1509_26994, RNA1509_32855, RNA1509_33076, RNA1509_44724} {RNA1509_13589, RNA1509_26994, RNA1509_32855, RNA1509_33076, RNA1509_44724, RNA815_1327.1}
4. MligTC455_32405 5821 121.27 Mlig455_017238

Neo: -

Age: -

PITPNA 0.967 - - - 0.967 - - Mlig455_017238 {REF} {Length: 1800} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=378.2]} {Human: ENSG00000174238, PITPNA, phosphatidylinositol transfer protein alpha, [RH, Score=323, Expect=4e-111]; ENSG00000180957, PITPNB, phosphatidylinositol transfer protein beta, [RH, Score=310, Expect=6e-106]} {Mouse: ENSMUSG00000017781, Pitpna, phosphatidylinositol transfer protein, alpha, [RH, Score=320, Expect=2e-110]; ENSMUSG00000050017, Pitpnb, phosphatidylinositol transfer protein, beta, [RH, Score=307, Expect=3e-105]} {Dmel: FBgn0267975, vib, vibrator, [RH, Score=350, Expect=2e-122]} {Celegans: WBGene00021854, Y54F10AR.1, [RH, Score=315, Expect=1e-108]} {Smed: dd_Smed_v6_580_0_1, dd_Smed_v6_580_0_1, [RH, Score=383, Expect=2e-135]} {RNA1509_18588, RNA1509_29408, RNA1509_35403, RNA1509_52353} {RNA1310_20208, RNA1509_18588, RNA1509_29408, RNA1509_35403, RNA1509_52353} {RNA1509_18588, RNA1509_29408, RNA1509_35403, RNA1509_52353, RNA815_7237.2}
5. MligTC455_21857 3307 68.9 Mlig455_035872, Mlig455_035910

Neo: Int S/G2/M

Age: -

ABCF2, AC021097.2 0.959 - - - 0.959 - -

Mlig455_035872 {REF} {Length: 6105} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=160.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=72.9]; ABC transporter [PF12848.9, score=67.4]; RecF/RecN/SMC N terminal domain [PF02463.21, score=39.7]; P-loop containing region of AAA domain [PF13555.8, score=31.5]; AAA domain [PF13521.8, score=29.4]; AAA ATPase domain [PF13191.8, score=27.2]; RsgA GTPase [PF03193.18, score=26.6]; 50S ribosome-binding GTPase [PF01926.25, score=26.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=25.8]; AAA ATPase domain [PF13175.8, score=25.5]; AAA domain [PF13238.8, score=24.9]; NACHT domain [PF05729.14, score=23.9]; AAA domain [PF13671.8, score=23.9]; AAA domain [PF13401.8, score=23.7]; AAA domain [PF13173.8, score=23.4]; AAA domain [PF13476.8, score=21.3]; NB-ARC domain [PF00931.24, score=19.7]; AAA domain [PF13514.8, score=18.5]} {Human: ENSG00000033050, ABCF2, ATP binding cassette subfamily F member 2, [RH, Score=825, Expect=0.0]; ENSG00000285292, AC021097.2, ATP binding cassette subfamily F member 2, [RH, Score=824, Expect=0.0]} {Mouse: ENSMUSG00000028953, Abcf2, ATP-binding cassette, sub-family F (GCN20), member 2, [RH, Score=823, Expect=0.0]} {Dmel: FBgn0030672, CG9281, [RH, Score=833, Expect=0.0]} {Celegans: WBGene00012097, abcf-2, ABC transporter, class F, [RH, Score=777, Expect=0.0]} {Smed: dd_Smed_v6_434_0_1, dd_Smed_v6_434_0_1, [RH, Score=895, Expect=0.0]} {RNA1509_11526, RNA1509_3583} {RNA1310_9063, RNA1509_11526, RNA1509_3583} {RNA1509_11526, RNA1509_3583, RNA815_2973}

Mlig455_035910 {REF} {Length: 2454} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=160.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=72.9]; ABC transporter [PF12848.9, score=67.4]; RecF/RecN/SMC N terminal domain [PF02463.21, score=39.8]; P-loop containing region of AAA domain [PF13555.8, score=31.5]; AAA domain [PF13521.8, score=29.4]; AAA ATPase domain [PF13191.8, score=27.3]; RsgA GTPase [PF03193.18, score=26.6]; 50S ribosome-binding GTPase [PF01926.25, score=26.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=25.8]; AAA ATPase domain [PF13175.8, score=25.7]; AAA domain [PF13238.8, score=24.9]; NACHT domain [PF05729.14, score=23.9]; AAA domain [PF13671.8, score=23.9]; AAA domain [PF13401.8, score=23.7]; AAA domain [PF13173.8, score=23.4]; AAA domain [PF13476.8, score=21.3]; NB-ARC domain [PF00931.24, score=19.7]; AAA domain [PF13514.8, score=18.3]} {Human: ENSG00000285292, AC021097.2, ATP binding cassette subfamily F member 2, [RH, Score=825, Expect=0.0]; ENSG00000033050, ABCF2, ATP binding cassette subfamily F member 2, [RH, Score=825, Expect=0.0]} {Mouse: ENSMUSG00000028953, Abcf2, ATP-binding cassette, sub-family F (GCN20), member 2, [RH, Score=824, Expect=0.0]} {Dmel: FBgn0030672, CG9281, [RH, Score=834, Expect=0.0]} {Celegans: WBGene00012097, abcf-2, ABC transporter, class F, [RH, Score=778, Expect=0.0]} {Smed: dd_Smed_v6_434_0_1, dd_Smed_v6_434_0_1, [RH, Score=896, Expect=0.0]} {RNA1509_11526} {RNA1310_9063} {RNA815_2973}
6. MligTC455_19797 1294 26.96 Mlig455_049091

Neo: Irradiation

Age: logFC(26M/2M)=0.368

Region-enriched R5: 1.341/0.00089

NOM1 0.954 - - - 0.954 - - Mlig455_049091 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: MA3 domain [PF02847.19, score=28.7]} {Human: ENSG00000146909, NOM1, nucleolar protein with MIF4G domain 1, [RH, Score=199, Expect=3e-53]} {Mouse: ENSMUSG00000001569, Nom1, nucleolar protein with MIF4G domain 1, [RH, Score=200, Expect=7e-54]} {Celegans: WBGene00013129, Y52B11A.10, [RH, Score=110, Expect=1e-24]} {Smed: dd_Smed_v6_1906_0_1, dd_Smed_v6_1906_0_1, [Score=52.4, Expect=7e-07]} {RNA1509_24372, RNA1509_42430, RNA1509_5368} {RNA1310_8146.2, RNA1509_24372, RNA1509_42430, RNA1509_5368} {RNA1509_24372, RNA1509_42430, RNA1509_5368, RNA815_9940}
7. MligTC455_44510 380 7.92 Mlig455_016691

Neo: -

Age: Up-Down-Up

Region-enriched R3: 2.041/0.03837
Region-enriched R5: 1.662/0.04104

0.952 - - - 0.952 - - Mlig455_016691 {REF} {Length: 2044} {Pfam: NHL repeat [PF01436.23, score=33.1]} {Dmel: FBgn0265356, tn, thin, [Score=54.7, Expect=2e-07]} {RNA1509_29651} {RNA1310_17074.1, RNA1509_29651} {RNA1509_29651, RNA815_36142}
8. MligTC455_28311 1108 23.07 Mlig455_056769

Neo: Irradiation

Age: logFC(26M/2M)=0.168

DRG1 0.95 - - - 0.950 - - Mlig455_056769 {REF} {Length: 5905} {Pfam: C-terminal region of MMR_HSR1 domain [PF16897.7, score=136.4]; TGS domain [PF02824.23, score=84.8]; 50S ribosome-binding GTPase [PF01926.25, score=70.2]; Ferrous iron transport protein B [PF02421.20, score=41.6]} {Human: ENSG00000185721, DRG1, developmentally regulated GTP binding protein 1, [RH, Score=616, Expect=0.0]} {Mouse: ENSMUSG00000020457, Drg1, developmentally regulated GTP binding protein 1, [RH, Score=613, Expect=0.0]} {Dmel: FBgn0010339, 128up, upstream of RpIII128, [RH, Score=615, Expect=0.0]} {Celegans: WBGene00012126, T28D6.6, [RH, Score=608, Expect=0.0]} {Smed: dd_Smed_v6_5779_0_1, dd_Smed_v6_5779_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_14341, RNA1509_14673, RNA1509_25066, RNA1509_33301} {RNA1310_570.1, RNA1509_14341, RNA1509_14673, RNA1509_25066} {RNA1509_14341, RNA1509_14673, RNA1509_25066, RNA815_134.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA