Data search


search
Exact
Search

Results for MligTC455_47125

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47125 132 2.76 Mlig455_066246

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.309

AK5 Mlig455_066246 {REF} {Length: 2171} {TRANSSPLICED} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=53.5, Expect=3e-07]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=55.1, Expect=7e-08]} {Celegans: WBGene00008746, F13E6.2, [Score=57.0, Expect=1e-08]} {Smed: dd_Smed_v6_5119_0_2, dd_Smed_v6_5119_0_2, [Score=73.2, Expect=6e-14]} {RNA1509_57470, RNA1509_8342} {RNA1310_8261.1, RNA1509_57470} {RNA1509_57470, RNA815_11595}

Cumulative graph for MligTC455_47125

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.742 2.359 1.00000 1.00000
RegionR2 2.112 2.359 0.09235 0.37277
RegionR3 2.387 2.359 0.01186 0.17144
RegionR4 1.752 2.359 0.13649 0.37584
RegionR5 1.817 2.359 0.06734 0.23163
RegionR6 0.863 2.359 0.44264 1.00000
RegionR7 0.64 2.359 0.57675 1.00000
RegionR8 -4.828 2.359 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.28 2.359 0.99990 1.00000
RegenerationR2 1.104 2.359 0.08816 0.47611
RegenerationR3 -0.159 2.359 0.84582 0.99657
RegenerationR4 0.209 2.359 0.79762 0.98561
RegenerationR5 -0.028 2.359 0.97395 1.00000
RegenerationR6 1.08 2.359 0.22436 0.56949
RegenerationBL -2.142 2.359 1.00000 1.00000
RegenerationTP 4.487 2.359 0.00779 0.14824


Genes with expression patterns similar to MligTC455_47125

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47125 132 2.76 Mlig455_066246

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.309

AK5 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_066246 {REF} {Length: 2171} {TRANSSPLICED} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=53.5, Expect=3e-07]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=55.1, Expect=7e-08]} {Celegans: WBGene00008746, F13E6.2, [Score=57.0, Expect=1e-08]} {Smed: dd_Smed_v6_5119_0_2, dd_Smed_v6_5119_0_2, [Score=73.2, Expect=6e-14]} {RNA1509_57470, RNA1509_8342} {RNA1310_8261.1, RNA1509_57470} {RNA1509_57470, RNA815_11595}
2. MligTC455_47126 130 2.7 Mlig455_066263

Neo: -

Age: -

AK5 5.524 1.000 0.987 1.000 0.711 0.828 0.998 Mlig455_066263 {REF} {Length: 2479} {TRANSSPLICED} {Pfam: Adenylate kinase [PF00406.24, score=53.5]; AAA domain [PF13207.8, score=43.9]; AAA domain [PF13238.8, score=28.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=26.2]; AAA ATPase domain [PF13191.8, score=25.9]; AAA domain [PF13671.8, score=22.6]} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=154, Expect=7e-40]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=151, Expect=3e-39]} {Dmel: FBgn0032083, CG9541, [Score=86.7, Expect=1e-17]} {Celegans: WBGene00008746, F13E6.2, [RH, Score=139, Expect=1e-34]} {Smed: dd_Smed_v6_5119_0_1, dd_Smed_v6_5119_0_1, [Score=194, Expect=3e-53]} {RNA1509_15464, RNA1509_44174, RNA1509_8342} {RNA1310_8261.1, RNA1509_15464, RNA1509_44174, RNA1509_8342} {RNA1509_15464, RNA1509_44174, RNA1509_8342, RNA815_13379}
3. MligTC455_49789 85 1.77 Mlig455_033540

Neo: -

Age: Up-Up-Down

Region-enriched R5: 3.704/0.00008

TRIM2 0.985 - - - - 0.985 - Mlig455_033540 {REF} {Length: 4183} {Pfam: NHL repeat [PF01436.23, score=48.9]; Filamin/ABP280 repeat [PF00630.21, score=33.2]; SMP-30/Gluconolactonase/LRE-like region [PF08450.14, score=29.4]; RING-type zinc-finger [PF13445.8, score=26.1]; zinc-RING finger domain [PF14634.8, score=25.3]; B-box zinc finger [PF00643.26, score=21.8]; Ring finger domain [PF13639.8, score=20.8]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=152, Expect=6e-38]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=150, Expect=1e-37]} {Dmel: FBgn0031999, CG8419, [RH, Score=59.7, Expect=8e-09]} {Celegans: WBGene00003599, nhl-3, NHL (Ring finger b-box coiled coil) domain containing, [Score=304, Expect=4e-93]} {RNA1509_46302, RNA1509_58017} {RNA1310_9321, RNA1509_46302, RNA1509_58017} {RNA1509_46302, RNA1509_58017, RNA815_20657}
4. MligTC455_32863 188 3.91 Mlig455_028353

Neo: Int S/G2/M

Age: Up-Up-Down

0.973 - - - - 0.973 - Mlig455_028353 {REF} {Length: 1978} {TRANSSPLICED} {RNA1509_40955} {RNA1310_60768} {RNA815_8954.1}
5. MligTC455_20244 224 4.67 Mlig455_006227, Mlig455_006289

Neo: -

Age: Down-Down-Up

PRR9 0.971 - - - - 0.971 -

Mlig455_006227 {REF} {Length: 528} {NoTransDecoderORF} {RNA1509_36220} {RNA1310_70757.1} {RNA815_57106}

Mlig455_006289 {REF} {Length: 2388} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=1e-05]} {RNA1509_13, RNA1509_34, RNA1509_36220} {RNA1310_70757.1, RNA1509_13, RNA1509_34} {RNA1509_13, RNA1509_34, RNA815_57106}
6. MligTC455_42924 189 3.94 Mlig455_013919

Neo: -

Age: -

Region-enriched R4: 2.463/0.04490

IFT140 0.969 - - - - - 0.969 Mlig455_013919 {REF} {Length: 5771} {Pfam: Region in Clathrin and VPS [PF00637.22, score=30.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=29.6]; WD domain, G-beta repeat [PF00400.34, score=27.3]; Tetratricopeptide repeat [PF13176.8, score=24.3]; Coatomer WD associated region [PF04053.16, score=22.4]; Tetratricopeptide repeat [PF13428.8, score=22.1]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=18.8]; PPR repeat family [PF13041.8, score=18.8]} {Human: ENSG00000187535, IFT140, intraflagellar transport 140, [RH, Score=1102, Expect=0.0]} {Mouse: ENSMUSG00000024169, Ift140, intraflagellar transport 140, [RH, Score=1125, Expect=0.0]} {Dmel: FBgn0260933, rempA, reduced mechanoreceptor potential A, [RH, Score=685, Expect=0.0]} {Celegans: WBGene00000490, che-11, [RH, Score=714, Expect=0.0]} {Smed: dd_Smed_v6_11300_0_1, dd_Smed_v6_11300_0_1, [RH, Score=771, Expect=0.0]} {RNA1509_4178} {RNA1310_1450.1, RNA1509_4178} {RNA1509_4178, RNA815_1042}
7. MligTC455_11410 24 0.5 Mlig455_070874

Neo: -

Age: -

0.968 - - - - 0.968 - Mlig455_070874 {REF} {Length: 2487} {RNA1310_71185}
8. MligTC455_33068 138 2.87 Mlig455_011936

Neo: -

Age: -

0.966 - - - - 0.966 - Mlig455_011936 {REF} {Length: 1402} {TRANSSPLICED} {RNA1509_20571} {RNA1310_38731} {RNA815_19943}
9. MligTC455_33069 146 3.04 Mlig455_011944

Neo: -

Age: Down-Up-Down

0.964 - - - - 0.964 - Mlig455_011944 {REF} {Length: 1422} {TRANSSPLICED} {RNA1509_20571, RNA1509_24355, RNA1509_56123} {RNA1310_38731, RNA1509_24355, RNA1509_56123} {RNA1509_24355, RNA1509_56123, RNA815_19943}
10. MligTC455_40520 207 4.32 Mlig455_053211

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=2.096

0.961 - - - - 0.961 - Mlig455_053211 {REF} {Length: 1561} {RNA1509_11880} {RNA1310_18623, RNA1509_11880} {RNA1509_11880, RNA815_8546}
11. MligTC455_27609 231 4.8 Mlig455_031171

Neo: -

Age: Up-Down-Down

RYR2 0.956 - - - - - 0.956 Mlig455_031171 {REF} {Length: 1840} {Human: ENSG00000198626, RYR2, ryanodine receptor 2, [Score=57.0, Expect=9e-10]; ENSG00000198838, RYR3, ryanodine receptor 3, [Score=55.8, Expect=2e-09]; ENSG00000196218, RYR1, ryanodine receptor 1, [Score=55.1, Expect=4e-09]} {Mouse: ENSMUSG00000021313, Ryr2, ryanodine receptor 2, cardiac, [Score=57.0, Expect=6e-10]; ENSMUSG00000057378, Ryr3, ryanodine receptor 3, [Score=56.2, Expect=1e-09]; ENSMUSG00000030592, Ryr1, ryanodine receptor 1, skeletal muscle, [Score=55.1, Expect=3e-09]} {Dmel: FBgn0011286, RyR, Ryanodine receptor, [Score=52.8, Expect=1e-08]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [Score=99.4, Expect=4e-25]} {RNA1509_17046} {RNA1310_1857} {RNA815_62.1}
12. MligTC455_01971 29 0.61 Mlig455_043455

Neo: -

Age: Up-Down-Down

0.954 - - - - 0.954 - Mlig455_043455 {REF} {Length: 2977} {NoTransDecoderORF} {RNA1509_8098} {RNA1310_1671} {RNA815_48419}
13. MligTC455_17477 47 0.98 Mlig455_053346

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_053346 {REF} {Length: 2041} {RNA1509_20382} {RNA1310_59327} {RNA815_58492}
14. MligTC455_40067 143 2.98 Mlig455_069272

Neo: -

Age: Up-Down-Down

DAGLA 0.951 - - - - - 0.951 Mlig455_069272 {REF} {Length: 3991} {Pfam: Lipase (class 3) [PF01764.27, score=33.2]} {Human: ENSG00000134780, DAGLA, diacylglycerol lipase alpha, [Score=207, Expect=7e-55]} {Mouse: ENSMUSG00000035735, Dagla, diacylglycerol lipase, alpha, [Score=207, Expect=7e-55]} {Dmel: FBgn0261244, inaE, inactivation no afterpotential E, [Score=237, Expect=3e-67]} {Celegans: WBGene00018364, dagl-2, DiAcylGlycerol Lipase homolog, [Score=63.9, Expect=4e-10]} {Smed: dd_Smed_v6_13306_0_4, dd_Smed_v6_13306_0_4, [Score=73.2, Expect=4e-13]} {RNA1509_34493} {RNA1310_7849} {RNA815_28888}
15. MligTC455_49254 528 11.01 Mlig455_039924

Neo: -

Age: logFC(26M/2M)=0.662

MORN2 0.951 - - - - - 0.951 Mlig455_039924 {REF} {Length: 1674} {Pfam: MORN repeat [PF02493.22, score=64.6]} {Human: ENSG00000188010, MORN2, MORN repeat containing 2, [RH, Score=124, Expect=1e-36]} {Mouse: ENSMUSG00000045257, Morn2, MORN repeat containing 2, [RH, Score=126, Expect=9e-38]} {Dmel: FBgn0032478, CG5458, [Score=67.4, Expect=9e-14]} {Smed: dd_Smed_v6_6857_0_1, dd_Smed_v6_6857_0_1, [RH, Score=126, Expect=3e-38]} {RNA1509_42709} {RNA1310_23298, RNA1509_42709} {RNA1509_42709, RNA815_18336}
16. MligTC455_21036 7843 163.39 Mlig455_057458

Neo: Int S/G2/M

Age: -

0.95 - - - - 0.950 - Mlig455_057458 {REF} {Length: 320} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_712} {RNA1310_95473} {RNA815_49240}
17. MligTC455_44679 1192 24.82 Mlig455_015484

Neo: -

Age: -

CATIP 0.95 - - - - - 0.950 Mlig455_015484 {REF} {Length: 1772} {Human: ENSG00000158428, CATIP, ciliogenesis associated TTC17 interacting protein, [RH, Score=235, Expect=2e-73]} {Mouse: ENSMUSG00000073650, Catip, ciliogenesis associated TTC17 interacting protein, [RH, Score=199, Expect=1e-58]} {Smed: dd_Smed_v6_5952_0_4, dd_Smed_v6_5952_0_4, [RH, Score=307, Expect=6e-102]} {RNA1509_4430} {RNA1310_17964} {RNA815_14802}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA