TomoSeq data search

Data search

Results for MligTC455_40520

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40520

207

4.32

Mlig455_053211

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=2.096

Mlig455_053211 {REF} {Length: 1561} {RNA1509_11880} {RNA1310_18623, RNA1509_11880} {RNA1509_11880, RNA815_8546}

Cumulative graph for MligTC455_40520

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-8.177	2.723	0.01515	0.34659
RegionR2	2.41	2.723	0.00829	0.08937
RegionR3	1.105	2.723	0.22082	0.76278
RegionR4	-0.29	2.723	0.92551	1.00000
RegionR5	1.508	2.723	0.04368	0.16996
RegionR6	1.319	2.723	0.13031	0.65140
RegionR7	1.296	2.723	0.19884	0.80558
RegionR8	0.828	2.723	0.49982	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.587	2.723	1.00000	1.00000
RegenerationR2	-0.603	2.723	0.30788	0.74812
RegenerationR3	0.303	2.723	0.64921	0.92860
RegenerationR4	0.427	2.723	0.53222	0.88470
RegenerationR5	-0.485	2.723	0.41512	0.80844
RegenerationR6	-0.128	2.723	0.85349	1.00000
RegenerationBL	-2.506	2.723	0.04852	0.25276
RegenerationTP	1.058	2.723	0.18064	0.61595

Genes with expression patterns similar to MligTC455_40520

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40520	207	4.32	Mlig455_053211	Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.096		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_053211 {REF} {Length: 1561} {RNA1509_11880} {RNA1310_18623, RNA1509_11880} {RNA1509_11880, RNA815_8546}
2.	MligTC455_43020	180	3.74	Mlig455_066595	Neo: Int S/G2/M Age: -	TRIT1	1.706	0.756	-	-	-	0.950	-	Mlig455_066595 {REF} {Length: 5766} {TRANSSPLICED} {Pfam: IPP transferase [PF01715.19, score=210.8]; AAA ATPase domain [PF13191.8, score=23.1]; Isopentenyl transferase [PF01745.18, score=20.3]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=20.1]; Zinc-finger of C2H2 type [PF12874.9, score=19.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.3]; AAA domain [PF13671.8, score=19.0]} {Human: ENSG00000043514, TRIT1, tRNA isopentenyltransferase 1, [RH, Score=285, Expect=1e-90]} {Mouse: ENSMUSG00000028653, Trit1, tRNA isopentenyltransferase 1, [RH, Score=288, Expect=6e-92]} {Dmel: FBgn0043799, CG31381, [RH, Score=252, Expect=5e-78]} {Celegans: WBGene00001740, gro-1, tRNA isopentenyl transferase, [RH, Score=188, Expect=2e-54]} {Smed: dd_Smed_v6_11495_0_1, dd_Smed_v6_11495_0_1, [RH, Score=239, Expect=5e-74]} {RNA1509_51518} {RNA1310_17884} {RNA815_5793.1}
3.	MligTC455_44704	104	2.17	Mlig455_050401	Neo: - Age: - Region-enriched R4: 2.979/0.04664	MLF2	0.977	-	-	-	0.977	-	-	Mlig455_050401 {REF} {Length: 1827} {Pfam: Myelodysplasia-myeloid leukemia factor 1-interacting protein [PF10248.11, score=119.0]} {Human: ENSG00000089693, MLF2, myeloid leukemia factor 2, [Score=87.8, Expect=8e-20]} {Mouse: ENSMUSG00000048416, Mlf1, myeloid leukemia factor 1, [Score=92.0, Expect=3e-21]; ENSMUSG00000030120, Mlf2, myeloid leukemia factor 2, [Score=88.6, Expect=3e-20]} {Dmel: FBgn0034051, Mlf, Myelodysplasia/myeloid leukemia factor, [Score=89.7, Expect=1e-20]} {Smed: dd_Smed_v6_4787_0_1, dd_Smed_v6_4787_0_1, [Score=100, Expect=4e-25]} {RNA1509_25069, RNA1509_57570} {RNA1310_19505, RNA1509_25069, RNA1509_57570} {RNA1509_25069, RNA1509_57570, RNA815_19430}
4.	MligTC455_52153	266	5.53	Mlig455_024583	Neo: - Age: Up-Down-Up Regeneration-upregulated TP: 5.694 Regeneration-enriched TP: 5.694	ABHD17B	0.971	-	-	-	-	0.971	-	Mlig455_024583 {REF} {Length: 3736} {TRANSSPLICED} {Pfam: Serine aminopeptidase, S33 [PF12146.10, score=51.0]; alpha/beta hydrolase fold [PF00561.22, score=29.3]; Alpha/beta hydrolase family [PF12697.9, score=28.2]; Prolyl oligopeptidase family [PF00326.23, score=19.2]} {Human: ENSG00000107362, ABHD17B, abhydrolase domain containing 17B, [RH, Score=382, Expect=1e-133]; ENSG00000136379, ABHD17C, abhydrolase domain containing 17C, [RH, Score=377, Expect=3e-131]; ENSG00000129968, ABHD17A, abhydrolase domain containing 17A, [RH, Score=375, Expect=2e-130]} {Mouse: ENSMUSG00000038459, Abhd17c, abhydrolase domain containing 17C, [RH, Score=382, Expect=2e-133]; ENSMUSG00000047368, Abhd17b, abhydrolase domain containing 17B, [RH, Score=381, Expect=9e-134]; ENSMUSG00000003346, Abhd17a, abhydrolase domain containing 17A, [RH, Score=369, Expect=3e-128]} {Dmel: FBgn0053096, CG33096, [RH, Score=362, Expect=3e-126]} {Celegans: WBGene00045192, aho-3, [RH, Score=339, Expect=1e-116]} {Smed: dd_Smed_v6_8263_0_1, dd_Smed_v6_8263_0_1, [RH, Score=317, Expect=5e-108]} {RNA1509_29733, RNA1509_8855} {RNA1310_4289.1, RNA1509_29733} {RNA1509_29733, RNA815_12927}
5.	MligTC455_31522	488	10.16	Mlig455_006598	Neo: - Age: Down-Up-Down		0.969	-	-	-	-	0.969	-	Mlig455_006598 {REF} {Length: 8383} {RNA1509_25311} {RNA1310_2138} {RNA815_5558.1}
6.	MligTC455_49710	69	1.45	Mlig455_064824	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_064824 {REF} {Length: 1191} {NoTransDecoderORF} {RNA1509_51983} {RNA1310_69193} {RNA815_28501}
7.	MligTC455_02672	334	6.95	Mlig455_042012	Neo: - Age: Up-Up-Down Region-enriched R2: 3.139/0.00043 Regeneration-upregulated TP: 4.172 Regeneration-enriched TP: 4.172	PPP1R3A	0.964	-	-	-	-	0.964	-	Mlig455_042012 {REF} {Length: 4507} {TRANSSPLICED} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=87.8]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=44.2]; BTB/POZ domain [PF00651.33, score=27.4]} {Human: ENSG00000154415, PPP1R3A, protein phosphatase 1 regulatory subunit 3A, [RH, Score=110, Expect=5e-24]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [Score=89.4, Expect=5e-19]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=103, Expect=2e-22]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=85.5, Expect=1e-17]} {Smed: dd_Smed_v6_8791_0_1, dd_Smed_v6_8791_0_1, [RH, Score=122, Expect=2e-30]} {RNA1509_16470, RNA1509_22847} {RNA1310_2197, RNA1509_16470, RNA1509_22847} {RNA1509_16470, RNA1509_22847, RNA815_5976}
8.	MligTC455_47125	132	2.76	Mlig455_066246	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.309	AK5	0.961	-	-	-	-	0.961	-	Mlig455_066246 {REF} {Length: 2171} {TRANSSPLICED} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=53.5, Expect=3e-07]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=55.1, Expect=7e-08]} {Celegans: WBGene00008746, F13E6.2, [Score=57.0, Expect=1e-08]} {Smed: dd_Smed_v6_5119_0_2, dd_Smed_v6_5119_0_2, [Score=73.2, Expect=6e-14]} {RNA1509_57470, RNA1509_8342} {RNA1310_8261.1, RNA1509_57470} {RNA1509_57470, RNA815_11595}
9.	MligTC455_52131	530	11.05	Mlig455_007471	Neo: Int S/G2/M Age: logFC(26M/2M)=0.373	KRI1	0.958	-	-	-	-	-	0.958	Mlig455_007471 {REF} {Length: 2511} {TRANSSPLICED} {Pfam: KRI1-like family C-terminal [PF12936.9, score=77.0]; KRI1-like family [PF05178.14, score=61.3]} {Human: ENSG00000129347, KRI1, KRI1 homolog, [RH, Score=86.7, Expect=7e-17]} {Mouse: ENSMUSG00000035047, Kri1, KRI1 homolog, [RH, Score=95.5, Expect=7e-20]} {Dmel: FBgn0036254, CG5645, [RH, Score=70.9, Expect=3e-12]} {Celegans: WBGene00010044, F54C9.9, [RH, Score=75.5, Expect=8e-14]} {Smed: dd_Smed_v6_8647_0_1, dd_Smed_v6_8647_0_1, [RH, Score=70.9, Expect=2e-12]} {RNA1509_30002, RNA1509_9111} {RNA1310_8671.1, RNA1509_30002, RNA1509_9111} {RNA1509_30002, RNA1509_9111, RNA815_11251}
10.	MligTC455_38569	99	2.05	Mlig455_053600	Neo: - Age: - Region-enriched R2: 5.568/0.00008	PRKX	0.957	-	-	-	-	0.957	-	Mlig455_053600 {REF} {Length: 2867} {Pfam: Protein kinase domain [PF00069.27, score=20.4]} {Human: ENSG00000183943, PRKX, protein kinase X-linked, [Score=77.4, Expect=3e-17]} {Mouse: ENSMUSG00000035725, Prkx, protein kinase, X-linked, [Score=75.1, Expect=2e-16]} {Dmel: FBgn0000489, Pka-C3, Protein kinase, cAMP-dependent, catalytic subunit 3, [Score=64.7, Expect=7e-13]} {Celegans: WBGene00018569, F47F2.1, cAMP-dependent protein kinase, catalytic subunit-like, [Score=53.5, Expect=3e-09]} {Smed: dd_Smed_v6_3838_0_1, dd_Smed_v6_3838_0_1, [Score=85.9, Expect=7e-21]} {RNA1509_11342} {RNA1310_29225} {RNA815_12092}
11.	MligTC455_11315	154	3.2	Mlig455_027636, Mlig455_027650, Mlig455_036368, Mlig455_069999	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_027636 {REF} {Length: 1407} {RNA1509_40399} {RNA1310_60387} {RNA815_44351} Mlig455_027650 {REF} {Length: 1408} {RNA1509_40399} {RNA1310_60387} {RNA815_44351} Mlig455_036368 {REF} {Length: 592} {RNA1310_60387} {RNA815_44351} Mlig455_069999 {REF} {Length: 998} {RNA1310_60387} {RNA815_44351}
12.	MligTC455_17771	78	1.62	Mlig455_001663	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_001663 {REF} {Length: 1828} {NoTransDecoderORF} {RNA1310_81916}
13.	MligTC455_38041	221	4.61	Mlig455_050363	Neo: - Age: -	PITPNM1	0.955	-	-	-	-	0.955	-	Mlig455_050363 {REF} {Length: 6960} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=355.5]; DDHD domain [PF02862.19, score=125.1]} {Human: ENSG00000110697, PITPNM1, phosphatidylinositol transfer protein membrane associated 1, [RH, Score=937, Expect=0.0]} {Mouse: ENSMUSG00000024851, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=940, Expect=0.0]; ENSMUSG00000097096, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=940, Expect=0.0]} {Dmel: FBgn0003218, rdgB, retinal degeneration B, [RH, Score=644, Expect=0.0]} {Celegans: WBGene00010813, pitp-1, PhosphatidylInositol Transfer Protein family, [RH, Score=385, Expect=5e-115]} {Smed: dd_Smed_v6_7211_0_2, dd_Smed_v6_7211_0_2, [RH, Score=961, Expect=0.0]} {RNA1509_13228} {RNA1310_1072, RNA1509_13228} {RNA1509_13228, RNA815_6615}
14.	MligTC455_29449	88	1.84	Mlig455_055134	Neo: - Age: Up-Down-Down Region-enriched R4: 2.118/0.04706		0.952	-	-	-	-	0.952	-	Mlig455_055134 {REF} {Length: 3438} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=42.7, Expect=8e-06]} {RNA1509_50401} {RNA1310_13609} {RNA815_5685.1}
15.	Mlig999005.1						0.951	-	-	-	-	0.951	-
16.	MligTC455_19932	461	9.61	Mlig455_019596, Mlig455_059100	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_019596 {REF} {Length: 3118} {TRANSSPLICED} {RNA1509_20980} {RNA1310_30814.1} {RNA815_36360} Mlig455_059100 {REF} {Length: 3656} {TRANSSPLICED} {RNA1509_20980, RNA1509_28513} {RNA1310_30814.1, RNA1509_28513} {RNA1509_28513, RNA815_36360}
17.	MligTC455_20244	224	4.67	Mlig455_006227, Mlig455_006289	Neo: - Age: Down-Down-Up	PRR9	0.951	-	-	-	-	0.951	-	Mlig455_006227 {REF} {Length: 528} {NoTransDecoderORF} {RNA1509_36220} {RNA1310_70757.1} {RNA815_57106} Mlig455_006289 {REF} {Length: 2388} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=1e-05]} {RNA1509_13, RNA1509_34, RNA1509_36220} {RNA1310_70757.1, RNA1509_13, RNA1509_34} {RNA1509_13, RNA1509_34, RNA815_57106}
18.	MligTC455_01971	29	0.61	Mlig455_043455	Neo: - Age: Up-Down-Down		0.95	-	-	-	-	0.950	-	Mlig455_043455 {REF} {Length: 2977} {NoTransDecoderORF} {RNA1509_8098} {RNA1310_1671} {RNA815_48419}
19.	MligTC455_07856	74	1.54	Mlig455_032810	Neo: - Age: - Regeneration-enriched R6: 8.022 Regeneration-enriched TP: 7.697 Regeneration-enriched R3: 7.344 Regeneration-enriched R4: 6.104 Regeneration-enriched R5: 5.013		0.95	-	-	-	-	0.950	-	Mlig455_032810 {REF} {Length: 746} {NoTransDecoderORF}

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