TomoSeq data search

Data search

Results for MligTC455_47227

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47227	687	14.31	Mlig455_010392	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.516	GEMIN6	Mlig455_010392 {REF} {Length: 1153} {TRANSSPLICED} {Pfam: Gemin6 protein [PF06372.14, score=49.0]} {Human: ENSG00000152147, GEMIN6, gem nuclear organelle associated protein 6, [RH, Score=57.4, Expect=4e-10]} {Mouse: ENSMUSG00000055760, Gemin6, gem nuclear organelle associated protein 6, [RH, Score=53.9, Expect=5e-09]} {RNA1509_20807} {RNA1310_21063} {RNA815_7095.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_47227

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.024	4.136	0.31496	0.96466
RegionR2	-0.375	4.136	0.37588	0.77057
RegionR3	-0.678	4.136	0.05828	0.42575
RegionR4	0.965	4.136	0.01349	0.07624
RegionR5	0.349	4.136	0.23776	0.54784
RegionR6	-0.298	4.136	0.40776	0.97705
RegionR7	-0.947	4.136	0.09643	0.59446
RegionR8	-0.039	4.136	0.95068	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.327	4.136	0.79159	1.00000
RegenerationR2	0.202	4.136	0.53409	0.88613
RegenerationR3	0.402	4.136	0.29997	0.73147
RegenerationR4	-0.042	4.136	0.90376	1.00000
RegenerationR5	-0.128	4.136	0.69556	0.95009
RegenerationR6	1.112	4.136	0.00237	0.05509
RegenerationBL	1.235	4.136	0.00594	0.07337
RegenerationTP	-0.39	4.136	0.53250	0.92240

Genes with expression patterns similar to MligTC455_47227

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47227	687	14.31	Mlig455_010392	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.516	GEMIN6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010392 {REF} {Length: 1153} {TRANSSPLICED} {Pfam: Gemin6 protein [PF06372.14, score=49.0]} {Human: ENSG00000152147, GEMIN6, gem nuclear organelle associated protein 6, [RH, Score=57.4, Expect=4e-10]} {Mouse: ENSMUSG00000055760, Gemin6, gem nuclear organelle associated protein 6, [RH, Score=53.9, Expect=5e-09]} {RNA1509_20807} {RNA1310_21063} {RNA815_7095.1}
2.	MligTC455_36465	1635	34.06	Mlig455_065770, Mlig455_065793	Neo: - Age: - Region-enriched R5: 1.078/0.00340	PPP1R16B	0.978	-	-	-	0.978	-	-	Mlig455_065770 {REF} {Length: 2766} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.7]; Ankyrin repeats (many copies) [PF13637.8, score=95.5]; Ankyrin repeats (many copies) [PF13857.8, score=78.3]; Ankyrin repeat [PF13606.8, score=69.8]; Ankyrin repeat [PF00023.32, score=63.3]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [RH, Score=313, Expect=3e-99]} {Mouse: ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [RH, Score=311, Expect=1e-98]} {Dmel: FBgn0036801, MYPT-75D, [RH, Score=341, Expect=4e-108]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [RH, Score=280, Expect=6e-88]} {Smed: dd_Smed_v6_5941_0_1, dd_Smed_v6_5941_0_1, [RH, Score=363, Expect=6e-119]} {RNA1509_24384} {RNA1310_7124, RNA1509_24384} {RNA1509_24384, RNA815_8638} Mlig455_065793 {REF} {Length: 2614} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=59.2]; Ankyrin repeats (many copies) [PF13637.8, score=56.6]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeat [PF13606.8, score=40.2]; Ankyrin repeat [PF00023.32, score=31.9]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=254, Expect=4e-77]} {Mouse: ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=251, Expect=1e-76]; ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=251, Expect=3e-76]} {Dmel: FBgn0036801, MYPT-75D, [Score=281, Expect=8e-87]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=200, Expect=6e-58]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [Score=291, Expect=7e-92]} {RNA1509_8915} {RNA1310_7124} {RNA815_14567}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_47227

687

14.31

Mlig455_010392

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.516

GEMIN6

1.000

MligTC455_36465

1635

34.06

Mlig455_065770, Mlig455_065793

Neo: -

Age: -

Region-enriched R5: 1.078/0.00340

PPP1R16B

0.978

Mlig455_065770 {REF} {Length: 2766} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.7]; Ankyrin repeats (many copies) [PF13637.8, score=95.5]; Ankyrin repeats (many copies) [PF13857.8, score=78.3]; Ankyrin repeat [PF13606.8, score=69.8]; Ankyrin repeat [PF00023.32, score=63.3]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [RH, Score=313, Expect=3e-99]} {Mouse: ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [RH, Score=311, Expect=1e-98]} {Dmel: FBgn0036801, MYPT-75D, [RH, Score=341, Expect=4e-108]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [RH, Score=280, Expect=6e-88]} {Smed: dd_Smed_v6_5941_0_1, dd_Smed_v6_5941_0_1, [RH, Score=363, Expect=6e-119]} {RNA1509_24384} {RNA1310_7124, RNA1509_24384} {RNA1509_24384, RNA815_8638}

Mlig455_065793 {REF} {Length: 2614} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=59.2]; Ankyrin repeats (many copies) [PF13637.8, score=56.6]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeat [PF13606.8, score=40.2]; Ankyrin repeat [PF00023.32, score=31.9]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=254, Expect=4e-77]} {Mouse: ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=251, Expect=1e-76]; ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=251, Expect=3e-76]} {Dmel: FBgn0036801, MYPT-75D, [Score=281, Expect=8e-87]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=200, Expect=6e-58]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [Score=291, Expect=7e-92]} {RNA1509_8915} {RNA1310_7124} {RNA815_14567}