TomoSeq data search

Data search

Results for MligTC455_36465

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36465

1635

34.06

Mlig455_065770, Mlig455_065793

Neo: -

Age: -

Region-enriched R5: 1.078/0.00340

PPP1R16B

Mlig455_065770 {REF} {Length: 2766} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.7]; Ankyrin repeats (many copies) [PF13637.8, score=95.5]; Ankyrin repeats (many copies) [PF13857.8, score=78.3]; Ankyrin repeat [PF13606.8, score=69.8]; Ankyrin repeat [PF00023.32, score=63.3]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [RH, Score=313, Expect=3e-99]} {Mouse: ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [RH, Score=311, Expect=1e-98]} {Dmel: FBgn0036801, MYPT-75D, [RH, Score=341, Expect=4e-108]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [RH, Score=280, Expect=6e-88]} {Smed: dd_Smed_v6_5941_0_1, dd_Smed_v6_5941_0_1, [RH, Score=363, Expect=6e-119]} {RNA1509_24384} {RNA1310_7124, RNA1509_24384} {RNA1509_24384, RNA815_8638}

Mlig455_065793 {REF} {Length: 2614} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=59.2]; Ankyrin repeats (many copies) [PF13637.8, score=56.6]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeat [PF13606.8, score=40.2]; Ankyrin repeat [PF00023.32, score=31.9]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=254, Expect=4e-77]} {Mouse: ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=251, Expect=1e-76]; ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=251, Expect=3e-76]} {Dmel: FBgn0036801, MYPT-75D, [Score=281, Expect=8e-87]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=200, Expect=6e-58]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [Score=291, Expect=7e-92]} {RNA1509_8915} {RNA1310_7124} {RNA815_14567}

Cumulative graph for MligTC455_36465

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.941	5.364	0.27692	0.92786
RegionR2	0.313	5.364	0.45799	0.84541
RegionR3	0.043	5.364	0.89822	1.00000
RegionR4	-0.264	5.364	0.50568	0.83231
RegionR5	1.078	5.364	0.00025	0.00340
RegionR6	0.284	5.364	0.40083	0.97166
RegionR7	-0.281	5.364	0.49078	1.00000
RegionR8	-0.232	5.364	0.62517	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.249	5.364	0.06088	0.72807
RegenerationR2	0.23	5.364	0.53040	0.88436
RegenerationR3	0.445	5.364	0.27620	0.70982
RegenerationR4	0.464	5.364	0.26669	0.71396
RegenerationR5	-0.369	5.364	0.32647	0.74871
RegenerationR6	0.485	5.364	0.21847	0.56227
RegenerationBL	-0.194	5.364	0.67391	1.00000
RegenerationTP	0.619	5.364	0.17282	0.60551

Genes with expression patterns similar to MligTC455_36465

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36465	1635	34.06	Mlig455_065770, Mlig455_065793	Neo: - Age: - Region-enriched R5: 1.078/0.00340	PPP1R16B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_065770 {REF} {Length: 2766} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.7]; Ankyrin repeats (many copies) [PF13637.8, score=95.5]; Ankyrin repeats (many copies) [PF13857.8, score=78.3]; Ankyrin repeat [PF13606.8, score=69.8]; Ankyrin repeat [PF00023.32, score=63.3]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [RH, Score=313, Expect=3e-99]} {Mouse: ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [RH, Score=311, Expect=1e-98]} {Dmel: FBgn0036801, MYPT-75D, [RH, Score=341, Expect=4e-108]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [RH, Score=280, Expect=6e-88]} {Smed: dd_Smed_v6_5941_0_1, dd_Smed_v6_5941_0_1, [RH, Score=363, Expect=6e-119]} {RNA1509_24384} {RNA1310_7124, RNA1509_24384} {RNA1509_24384, RNA815_8638} Mlig455_065793 {REF} {Length: 2614} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=59.2]; Ankyrin repeats (many copies) [PF13637.8, score=56.6]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeat [PF13606.8, score=40.2]; Ankyrin repeat [PF00023.32, score=31.9]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=254, Expect=4e-77]} {Mouse: ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=251, Expect=1e-76]; ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=251, Expect=3e-76]} {Dmel: FBgn0036801, MYPT-75D, [Score=281, Expect=8e-87]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=200, Expect=6e-58]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [Score=291, Expect=7e-92]} {RNA1509_8915} {RNA1310_7124} {RNA815_14567}
2.	MligTC455_34583	920	19.17	Mlig455_051010, Mlig455_051075	Neo: Int S/G2/M Age: - Region-enriched R2: 1.717/0.02771	DHX8	2.578	-	-	0.878	0.954	-	0.746	Mlig455_051010 {REF} {Length: 5851} {TRANSSPLICED} {Pfam: Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=82.0]; Helicase associated domain (HA2) [PF04408.25, score=80.0]; Helicase conserved C-terminal domain [PF00271.33, score=47.4]; DEAD/DEAH box helicase [PF00270.31, score=31.8]; AAA domain [PF13401.8, score=25.3]; S1 RNA binding domain [PF00575.25, score=23.6]; AAA domain [PF13604.8, score=20.0]} {Human: ENSG00000067596, DHX8, DEAH-box helicase 8, [RH, Score=1407, Expect=0.0]} {Mouse: ENSMUSG00000034931, Dhx8, DEAH (Asp-Glu-Ala-His) box polypeptide 8, [RH, Score=1390, Expect=0.0]} {Dmel: FBgn0086895, pea, peanuts, [RH, Score=1321, Expect=0.0]} {Celegans: WBGene00003393, mog-5, Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5, [RH, Score=1271, Expect=0.0]} {Smed: dd_Smed_v6_8181_0_1, dd_Smed_v6_8181_0_1, [RH, Score=1265, Expect=0.0]} {RNA1509_10277, RNA1509_37859, RNA1509_43163, RNA1509_56668} {RNA1310_6897, RNA1509_10277, RNA1509_37859, RNA1509_43163, RNA1509_56668} {RNA1509_10277, RNA1509_37859, RNA1509_43163, RNA1509_56668, RNA815_3398} Mlig455_051075 {REF} {Length: 5066} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=82.2]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=82.2]; Helicase conserved C-terminal domain [PF00271.33, score=47.5]; DEAD/DEAH box helicase [PF00270.31, score=31.2]; AAA domain [PF13401.8, score=26.2]; S1 RNA binding domain [PF00575.25, score=23.7]} {Human: ENSG00000067596, DHX8, DEAH-box helicase 8, [RH, Score=1400, Expect=0.0]} {Mouse: ENSMUSG00000034931, Dhx8, DEAH (Asp-Glu-Ala-His) box polypeptide 8, [RH, Score=1396, Expect=0.0]} {Dmel: FBgn0086895, pea, peanuts, [RH, Score=1328, Expect=0.0]} {Celegans: WBGene00003393, mog-5, Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5, [RH, Score=1271, Expect=0.0]} {Smed: dd_Smed_v6_8181_0_1, dd_Smed_v6_8181_0_1, [RH, Score=1263, Expect=0.0]} {RNA1509_10277} {RNA1310_6897} {RNA815_3398}
3.	MligTC455_14268	441	9.19	Mlig455_055856	Neo: - Age: logFC(26M/2M)=0.305 Region-enriched R5: 1.111/0.03055	FXN	1.752	-	-	0.800	-	-	0.952	Mlig455_055856 {REF} {Length: 835} {TRANSSPLICED} {Pfam: Frataxin-like domain [PF01491.18, score=130.6]} {Human: ENSG00000165060, FXN, frataxin, [RH, Score=115, Expect=1e-31]} {Mouse: ENSMUSG00000059363, Fxn, frataxin, [RH, Score=114, Expect=3e-31]} {Dmel: FBgn0030092, fh, frataxin, [RH, Score=108, Expect=1e-29]} {Celegans: WBGene00001486, frh-1, Frataxin, mitochondrial, [RH, Score=107, Expect=7e-30]} {Smed: dd_Smed_v6_10952_0_1, dd_Smed_v6_10952_0_1, [RH, Score=101, Expect=3e-27]} {RNA1509_39485} {RNA1310_34480.1} {RNA815_16743}
4.	MligTC455_52389	545	11.36	Mlig455_012827	Neo: - Age: -		1.752	0.797	-	-	-	-	0.955	Mlig455_012827 {REF} {Length: 1894} {NoTransDecoderORF} {RNA1509_39500} {RNA1310_34800, RNA1509_39500} {RNA1509_39500, RNA815_18137.1}
5.	MligTC455_47227	687	14.31	Mlig455_010392	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.516	GEMIN6	0.978	-	-	-	0.978	-	-	Mlig455_010392 {REF} {Length: 1153} {TRANSSPLICED} {Pfam: Gemin6 protein [PF06372.14, score=49.0]} {Human: ENSG00000152147, GEMIN6, gem nuclear organelle associated protein 6, [RH, Score=57.4, Expect=4e-10]} {Mouse: ENSMUSG00000055760, Gemin6, gem nuclear organelle associated protein 6, [RH, Score=53.9, Expect=5e-09]} {RNA1509_20807} {RNA1310_21063} {RNA815_7095.1}
6.	MligTC455_41851	218	4.53	Mlig455_018663	Neo: - Age: Up-Down-Up	LZTR1	0.975	-	-	-	-	-	0.975	Mlig455_018663 {REF} {Length: 3341} {Pfam: Galactose oxidase, central domain [PF13418.8, score=122.6]; BTB/POZ domain [PF00651.33, score=114.9]; Kelch motif [PF13964.8, score=114.0]; Kelch motif [PF13854.8, score=109.2]; Galactose oxidase, central domain [PF13415.8, score=102.7]; Kelch motif [PF01344.27, score=101.8]; Kelch motif [PF07646.17, score=57.0]; BTB And C-terminal Kelch [PF07707.17, score=19.7]} {Human: ENSG00000099949, LZTR1, leucine zipper like transcription regulator 1, [RH, Score=617, Expect=0.0]} {Mouse: ENSMUSG00000022761, Lztr1, leucine-zipper-like transcriptional regulator, 1, [RH, Score=611, Expect=0.0]} {Dmel: FBgn0040344, CG3711, [RH, Score=625, Expect=0.0]} {Celegans: WBGene00001827, hcf-1, HCF1 related; Host cell factor 1, [Score=52.4, Expect=1e-06]} {Smed: dd_Smed_v6_11553_0_1, dd_Smed_v6_11553_0_1, [Score=75.9, Expect=7e-15]} {RNA1509_10391} {RNA1310_8211, RNA1509_10391} {RNA1509_10391, RNA815_3124}
7.	MligTC455_26643	312	6.5	Mlig455_028106	Neo: - Age: Down-Up-Up Region-enriched R5: 2.240/0.02123	TUBGCP2	0.971	-	-	-	-	-	0.971	Mlig455_028106 {REF} {Length: 2771} {TRANSSPLICED} {Pfam: Gamma tubulin complex component C-terminal [PF04130.15, score=239.2]; Gamma tubulin complex component N-terminal [PF17681.3, score=207.5]} {Human: ENSG00000130640, TUBGCP2, tubulin gamma complex associated protein 2, [RH, Score=574, Expect=0.0]} {Mouse: ENSMUSG00000025474, Tubgcp2, tubulin, gamma complex associated protein 2, [RH, Score=565, Expect=0.0]} {Dmel: FBgn0026430, Grip84, Gamma-tubulin ring protein 84, [RH, Score=346, Expect=1e-105]} {Smed: dd_Smed_v6_7469_0_1, dd_Smed_v6_7469_0_1, [RH, Score=365, Expect=6e-114]} {RNA1509_10994} {RNA1310_6326} {RNA815_15698.1}
8.	MligTC455_24421	426	8.87	Mlig455_043678	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_043678 {REF} {Length: 1868} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=39.6]} {Smed: dd_Smed_v6_9973_0_1, dd_Smed_v6_9973_0_1, [Score=47.8, Expect=2e-06]} {RNA1509_25048} {RNA1310_37030, RNA1509_25048} {RNA1509_25048, RNA815_28058}
9.	MligTC455_15874	479	9.99	Mlig455_032227	Neo: Int S/G2/M Age: Up-Down-Up, logFC(26M/2M)=1.258	HNRNPA2B1	0.962	-	-	-	0.962	-	-	Mlig455_032227 {REF} {Length: 2235} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=115.4]; RNA recognition motif [PF16367.7, score=47.7]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=184, Expect=3e-54]; ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=182, Expect=5e-54]; ENSG00000139675, HNRNPA1L2, heterogeneous nuclear ribonucleoprotein A1-like 2, [Score=178, Expect=3e-52]; ENSG00000170144, HNRNPA3, heterogeneous nuclear ribonucleoprotein A3, [Score=178, Expect=7e-52]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=184, Expect=5e-55]; ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=182, Expect=1e-53]; ENSMUSG00000092086, Gm6793, predicted gene 6793, [Score=181, Expect=5e-53]; ENSMUSG00000059005, Hnrnpa3, heterogeneous nuclear ribonucleoprotein A3, [Score=178, Expect=3e-52]} {Dmel: FBgn0001215, Hrb98DE, Heterogeneous nuclear ribonucleoprotein at 98DE, [Score=178, Expect=3e-52]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=181, Expect=3e-53]} {Smed: dd_Smed_v6_1194_0_2, dd_Smed_v6_1194_0_2, [Score=189, Expect=2e-57]} {RNA1509_21479} {RNA1310_19571, RNA1509_21479} {RNA1509_21479, RNA815_15616}
10.	MligTC455_33368	446	9.3	Mlig455_066579	Neo: - Age: Down-Up-Down Region-enriched R4: 1.602/0.00729		0.96	-	-	-	-	-	0.960	Mlig455_066579 {REF} {Length: 459} {RNA1509_15945} {RNA1310_116094} {RNA815_55531}
11.	MligTC455_42884	804	16.76	Mlig455_014074	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_014074 {REF} {Length: 1103} {TRANSSPLICED} {Pfam: Riboflavin kinase [PF01687.19, score=93.9]} {Dmel: FBgn0014930, CG2846, [RH, Score=65.5, Expect=9e-14]} {Celegans: WBGene00011224, R10H10.6, [RH, Score=75.9, Expect=5e-18]} {RNA1509_37619} {RNA1310_19341} {RNA815_8291}
12.	MligTC455_25143	837	17.43	Mlig455_006007, Mlig455_066588	Neo: - Age: - Region-enriched R5: 1.312/0.00214		0.951	-	-	-	-	-	0.951	Mlig455_006007 {REF} {Length: 7605} {Pfam: Galactoside-binding lectin [PF00337.24, score=75.9]} {Smed: dd_Smed_v6_10749_0_1, dd_Smed_v6_10749_0_1, [Score=66.6, Expect=8e-11]} {RNA1509_57716} {RNA1310_920.1, RNA1509_57716} {RNA1509_57716, RNA815_1560} Mlig455_066588 {REF} {Length: 7433} {Pfam: Galactoside-binding lectin [PF00337.24, score=77.0]} {Smed: dd_Smed_v6_10749_0_1, dd_Smed_v6_10749_0_1, [Score=67.0, Expect=6e-11]} {RNA1509_57716} {RNA1310_3547.1} {RNA815_1339}

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