Data search
Results for MligTC455_47230
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47230 | 248 | 5.17 | Mlig455_045999 | Neo: - Age: - |
RERGL | Mlig455_045999 {REF} {Length: 1314} {Pfam: Ras family [PF00071.24, score=84.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=38.6]} {Human: ENSG00000111404, RERGL, RERG like, [RH, Score=92.4, Expect=2e-22]} {Mouse: ENSMUSG00000092164, Rergl, RERG/RAS-like, [RH, Score=103, Expect=6e-27]} {Dmel: FBgn0035711, CG8519, [Score=90.1, Expect=1e-21]} {Celegans: WBGene00004308, rap-2, RAP homolog (Vertebrate Rap GTPase family), [Score=75.5, Expect=1e-16]} {Smed: dd_Smed_v6_7273_0_1, dd_Smed_v6_7273_0_1, [RH, Score=97.1, Expect=2e-24]} {RNA1310_27799} {RNA815_42256} |
Cumulative graph for MligTC455_47230
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.861 | 2.849 | 0.30012 | 0.94957 | |
| RegionR2 | 0.349 | 2.849 | 0.68740 | 1.00000 | |
| RegionR3 | 0.747 | 2.849 | 0.37421 | 0.90822 | |
| RegionR4 | 0.803 | 2.849 | 0.42853 | 0.75681 | |
| RegionR5 | -0.849 | 2.849 | 0.98237 | 1.00000 | |
| RegionR6 | 0.305 | 2.849 | 0.70617 | 1.00000 | |
| RegionR7 | 1.405 | 2.849 | 0.12369 | 0.66296 | |
| RegionR8 | 2.101 | 2.849 | 0.03544 | 0.36979 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.903 | 2.849 | 0.99995 | 1.00000 | |
| RegenerationR2 | 0.532 | 2.849 | 0.15087 | 0.58470 | |
| RegenerationR3 | 0.099 | 2.849 | 0.85284 | 0.99908 | |
| RegenerationR4 | -0.227 | 2.849 | 0.72292 | 0.96233 | |
| RegenerationR5 | 0.575 | 2.849 | 0.31698 | 0.74085 | |
| RegenerationR6 | -1.003 | 2.849 | 0.10162 | 0.39491 | |
| RegenerationBL | -0.899 | 2.849 | 0.17478 | 0.50100 | |
| RegenerationTP | -0.592 | 2.849 | 0.35071 | 0.79253 |
Genes with expression patterns similar to MligTC455_47230
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47230 | 248 | 5.17 | Mlig455_045999 | Neo: - Age: - |
RERGL | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_045999 {REF} {Length: 1314} {Pfam: Ras family [PF00071.24, score=84.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=38.6]} {Human: ENSG00000111404, RERGL, RERG like, [RH, Score=92.4, Expect=2e-22]} {Mouse: ENSMUSG00000092164, Rergl, RERG/RAS-like, [RH, Score=103, Expect=6e-27]} {Dmel: FBgn0035711, CG8519, [Score=90.1, Expect=1e-21]} {Celegans: WBGene00004308, rap-2, RAP homolog (Vertebrate Rap GTPase family), [Score=75.5, Expect=1e-16]} {Smed: dd_Smed_v6_7273_0_1, dd_Smed_v6_7273_0_1, [RH, Score=97.1, Expect=2e-24]} {RNA1310_27799} {RNA815_42256} |
| 2. | MligTC455_37654 | 406 | 8.47 | Mlig455_029446, Mlig455_029466 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.381 Region-enriched R7: 2.220/0.02232 |
LOXL2, LOXL4 | 1.766 | 0.958 | - | - | - | - | 0.808 | Mlig455_029446 {REF} {Length: 2317} {Pfam: Lysyl oxidase [PF01186.19, score=223.2]; Scavenger receptor cysteine-rich domain [PF00530.20, score=92.2]; Scavenger receptor cysteine-rich domain [PF15494.8, score=31.8]} {Human: ENSG00000134013, LOXL2, lysyl oxidase like 2, [Score=232, Expect=1e-68]; ENSG00000138131, LOXL4, lysyl oxidase like 4, [Score=223, Expect=4e-65]} {Mouse: ENSMUSG00000034205, Loxl2, lysyl oxidase-like 2, [Score=224, Expect=7e-66]; ENSMUSG00000025185, Loxl4, lysyl oxidase-like 4, [Score=216, Expect=8e-63]; ENSMUSG00000000693, Loxl3, lysyl oxidase-like 3, [Score=213, Expect=9e-62]} {Dmel: FBgn0034660, lox2, lysyl oxidase-like 2, [Score=255, Expect=8e-80]} {Smed: dd_Smed_v6_10591_0_1, dd_Smed_v6_10591_0_1, [Score=277, Expect=6e-89]} {RNA1509_58726} {RNA1310_16786} {RNA815_6954} Mlig455_029466 {REF} {Length: 2102} {Pfam: Lysyl oxidase [PF01186.19, score=261.1]; Scavenger receptor cysteine-rich domain [PF00530.20, score=107.2]; Scavenger receptor cysteine-rich domain [PF15494.8, score=30.3]} {Human: ENSG00000138131, LOXL4, lysyl oxidase like 4, [RH, Score=278, Expect=5e-83]; ENSG00000134013, LOXL2, lysyl oxidase like 2, [RH, Score=277, Expect=1e-82]; ENSG00000115318, LOXL3, lysyl oxidase like 3, [RH, Score=273, Expect=4e-81]} {Mouse: ENSMUSG00000000693, Loxl3, lysyl oxidase-like 3, [RH, Score=270, Expect=3e-80]; ENSMUSG00000025185, Loxl4, lysyl oxidase-like 4, [RH, Score=269, Expect=6e-80]; ENSMUSG00000034205, Loxl2, lysyl oxidase-like 2, [RH, Score=259, Expect=5e-76]} {Dmel: FBgn0034660, lox2, lysyl oxidase-like 2, [RH, Score=330, Expect=7e-106]} {Celegans: WBGene00015646, mlt-10, [Score=132, Expect=5e-32]} {Smed: dd_Smed_v6_10591_0_1, dd_Smed_v6_10591_0_1, [RH, Score=358, Expect=2e-117]} {RNA1509_58726} {RNA1310_16786} {RNA815_6954} |
| 3. | MligTC455_51314 | 525 | 10.93 | Mlig455_017296, Mlig455_045285 | Neo: - Age: - Region-enriched R2: 2.314/0.04004 |
1.733 | - | - | - | 0.972 | - | 0.761 | Mlig455_017296 {REF} {Length: 2087} {RNA1310_34789} {RNA815_64894} Mlig455_045285 {REF} {Length: 1644} {RNA1310_34789} {RNA815_64894} |
|
| 4. | MligTC455_47095 | 264 | 5.49 | Mlig455_034015 | Neo: - Age: logFC(26M/2M)=0.440 Region-enriched R2: 3.525/0.00629 Regeneration-upregulated R5: 2.857 Regeneration-enriched R5: 2.857 |
SSUH2 | 1.732 | - | - | - | 0.956 | 0.776 | - | Mlig455_034015 {REF} {Length: 2246} {Pfam: DnaJ central domain [PF00684.21, score=23.4]} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=110, Expect=9e-27]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=87.4, Expect=9e-19]} {RNA1509_22065} {RNA1310_14684, RNA1509_22065} {RNA1509_22065, RNA815_5263.1} |
| 5. | MligTC455_42723 | 666 | 13.88 | Mlig455_069654 | Neo: Irradiation Age: - Region-enriched R7: 2.955/0.00360 Regeneration-upregulated BL: 3.069 Regeneration-enriched BL: 3.069 |
1.71 | 0.956 | 0.754 | - | - | - | - | Mlig455_069654 {REF} {Length: 1471} {RNA1310_30663.1} {RNA815_50207} | |
| 6. | MligTC455_46604 | 383 | 7.97 | Mlig455_040706, Mlig455_064575 | Neo: - Age: - Region-enriched R2: 2.813/0.03742 |
1.704 | - | - | - | 0.960 | - | 0.744 | Mlig455_040706 {REF} {Length: 947} {Pfam: Domain of unknown function (DUF4695) [PF15766.7, score=39.5]} {Mouse: ENSMUSG00000087006, Gm13889, predicted gene 13889, [Score=44.7, Expect=1e-05]} {RNA1509_57682} {RNA1310_48869} {RNA815_41716} Mlig455_064575 {REF} {Length: 1007} {Pfam: Domain of unknown function (DUF4695) [PF15766.7, score=39.1]} {RNA1509_57682} {RNA1310_48869} {RNA815_41716} |
|
| 7. | MligTC455_40790 | 212 | 4.43 | Mlig455_032027 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 2.642/0.01234 |
PDE11A | 1.689 | - | - | - | 0.985 | - | 0.704 | Mlig455_032027 {REF} {Length: 3463} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=143.6]; GAF domain [PF01590.28, score=84.0]; GAF domain [PF13185.8, score=50.1]; GAF domain [PF13492.8, score=44.7]} {Human: ENSG00000128655, PDE11A, phosphodiesterase 11A, [Score=407, Expect=3e-128]; ENSG00000138735, PDE5A, phosphodiesterase 5A, [Score=405, Expect=4e-128]} {Mouse: ENSMUSG00000075270, Pde11a, phosphodiesterase 11A, [Score=405, Expect=1e-127]; ENSMUSG00000053965, Pde5a, phosphodiesterase 5A, cGMP-specific, [Score=404, Expect=5e-128]} {Dmel: FBgn0085370, Pde11, Phosphodiesterase 11, [Score=417, Expect=1e-130]} {Celegans: WBGene00016328, pde-5, Probable 3',5'-cyclic phosphodiesterase pde-5, [Score=232, Expect=1e-65]} {Smed: dd_Smed_v6_8595_0_4, dd_Smed_v6_8595_0_4, [Score=441, Expect=6e-142]} {RNA1509_52520} {RNA1310_8630.1, RNA1509_52520} {RNA1509_52520, RNA815_26873} |
| 8. | MligTC455_14190 | 26 | 0.54 | Mlig455_007887 | Neo: - Age: - |
1.678 | - | - | - | - | 0.711 | 0.967 | Mlig455_007887 {REF} {Length: 570} {NoTransDecoderORF} | |
| 9. | MligTC455_14487 | 157 | 3.26 | Mlig455_020723, Mlig455_020790 | Neo: - Age: logFC(26M/2M)=-0.434 |
FBXL7 | 0.985 | - | - | - | - | 0.985 | - | Mlig455_020723 {REF} {Length: 1892} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=44.0]; F-box domain [PF00646.35, score=29.0]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=51.6, Expect=3e-06]; ENSG00000153558, FBXL2, F-box and leucine rich repeat protein 2, [Score=50.1, Expect=6e-06]; ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=49.7, Expect=9e-06]} {Mouse: ENSMUSG00000032507, Fbxl2, F-box and leucine-rich repeat protein 2, [Score=51.6, Expect=1e-06]; ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=50.4, Expect=4e-06]; ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=50.4, Expect=1e-06]} {Dmel: FBgn0033639, CG9003, [Score=49.3, Expect=7e-06]} {RNA1509_13719} {RNA1310_4290.1} {RNA815_9704} Mlig455_020790 {REF} {Length: 1871} {Pfam: F-box-like [PF12937.9, score=44.1]; F-box domain [PF00646.35, score=29.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=24.5]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=52.8, Expect=9e-07]; ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=50.8, Expect=4e-06]; ENSG00000153558, FBXL2, F-box and leucine rich repeat protein 2, [Score=50.4, Expect=6e-06]} {Mouse: ENSMUSG00000032507, Fbxl2, F-box and leucine-rich repeat protein 2, [Score=52.4, Expect=9e-07]; ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=51.6, Expect=2e-06]; ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=50.1, Expect=2e-06]} {Dmel: FBgn0033639, CG9003, [Score=51.6, Expect=1e-06]} {RNA1509_13719} {RNA1310_4290.1} {RNA815_9704} |
| 10. | MligTC455_28391 | 197 | 4.1 | Mlig455_041238 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_041238 {REF} {Length: 2639} {TRANSSPLICED} {RNA1509_35221} {RNA1310_41838} {RNA815_24207} | |
| 11. | MligTC455_21519 | 505 | 10.53 | Mlig455_039816 | Neo: - Age: - |
GHDC | 0.961 | 0.961 | - | - | - | - | - | Mlig455_039816 {REF} {Length: 3759} {Pfam: GH3 auxin-responsive promoter [PF03321.15, score=390.4]} {Human: ENSG00000167925, GHDC, GH3 domain containing, [Score=72.0, Expect=2e-12]} {RNA1509_59400} {RNA1310_11058.1} {RNA815_4223.1} |
| 12. | MligTC455_23908 | 319 | 6.64 | Mlig455_035672, Mlig455_035768 | Neo: - Age: - Region-enriched R8: 3.529/0.00166 |
SDCBP | 0.956 | - | - | - | - | - | 0.956 | Mlig455_035672 {REF} {Length: 2598} {Pfam: PDZ domain [PF00595.26, score=78.0]; PDZ domain [PF17820.3, score=57.4]; PDZ domain [PF13180.8, score=42.0]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [Score=57.0, Expect=2e-08]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [Score=59.3, Expect=8e-09]; ENSMUSG00000028249, Sdcbp, syndecan binding protein, [Score=58.2, Expect=2e-09]} {Dmel: FBgn0029835, CG5921, [Score=67.4, Expect=2e-11]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [RH, Score=188, Expect=2e-54]} {RNA1509_47757} {RNA1310_7845.1} {RNA815_33452} Mlig455_035768 {REF} {Length: 2416} {Pfam: PDZ domain [PF00595.26, score=75.7]; PDZ domain [PF17820.3, score=57.2]; PDZ domain [PF13180.8, score=43.7]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [Score=56.2, Expect=5e-08]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [Score=62.0, Expect=1e-09]} {Dmel: FBgn0029835, CG5921, [Score=64.7, Expect=1e-10]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [RH, Score=188, Expect=6e-54]} {RNA1509_47757} {RNA1310_7845.1} {RNA815_33452} |
| 13. | MligTC455_30750 | 2067 | 43.07 | Mlig455_051133, Mlig455_063036 | Neo: - |
0.955 | 0.955 | - | - | - | - | - | Mlig455_051133 {REF} {Length: 1343} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=18.9]} {RNA1509_7841} {RNA1310_50281} {RNA815_3607} Mlig455_063036 {REF} {Length: 2534} {Smed: dd_Smed_v6_25359_0_1, dd_Smed_v6_25359_0_1, [Score=73.9, Expect=1e-14]} {RNA1509_31595, RNA1509_31688, RNA1509_7841} {RNA1310_29896, RNA1509_31595, RNA1509_31688, RNA1509_7841} {RNA1509_31595, RNA1509_31688, RNA1509_7841, RNA815_3607} |