Data search


search
Exact
Search

Results for MligTC455_47291

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47291 263 5.47 Mlig455_068275

Neo: -

Age: Down-Up-Up

LENG9 Mlig455_068275 {REF} {Length: 2477} {TRANSSPLICED} {Pfam: AKAP7 2'5' RNA ligase-like domain [PF10469.11, score=109.5]; MJ1316 RNA cyclic group end recognition domain [PF04457.14, score=83.3]; 2'-5' RNA ligase superfamily [PF13563.8, score=24.3]; LigT like Phosphoesterase [PF02834.18, score=22.1]} {Human: ENSG00000273574, LENG9, leukocyte receptor cluster member 9, [RH, Score=99.8, Expect=1e-21]; ENSG00000274495, LENG9, leukocyte receptor cluster member 9, [RH, Score=99.8, Expect=1e-21]} {Mouse: ENSMUSG00000043432, Leng9, leukocyte receptor cluster (LRC) member 9, [RH, Score=117, Expect=1e-27]} {RNA1509_33006, RNA1509_41500, RNA1509_50306} {RNA1310_7334.1, RNA1509_33006, RNA1509_41500, RNA1509_50306} {RNA1509_33006, RNA1509_41500, RNA1509_50306, RNA815_22553}

Cumulative graph for MligTC455_47291

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.373 3.031 0.82204 1.00000
RegionR2 0.294 3.031 0.68586 1.00000
RegionR3 0.885 3.031 0.10590 0.56928
RegionR4 -0.075 3.031 0.91608 1.00000
RegionR5 0.603 3.031 0.24268 0.55523
RegionR6 -0.324 3.031 0.61207 1.00000
RegionR7 -1.475 3.031 0.13249 0.68563
RegionR8 0.466 3.031 0.59773 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.238 3.031 0.34371 1.00000
RegenerationR2 1.201 3.031 0.03378 0.30332
RegenerationR3 -0.168 3.031 0.79320 0.98002
RegenerationR4 0.637 3.031 0.34546 0.77645
RegenerationR5 0.398 3.031 0.49563 0.85636
RegenerationR6 0.63 3.031 0.38093 0.72200
RegenerationBL 0.131 3.031 0.88973 1.00000
RegenerationTP 0.419 3.031 0.65670 0.99209


Genes with expression patterns similar to MligTC455_47291

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47291 263 5.47 Mlig455_068275

Neo: -

Age: Down-Up-Up

LENG9 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_068275 {REF} {Length: 2477} {TRANSSPLICED} {Pfam: AKAP7 2'5' RNA ligase-like domain [PF10469.11, score=109.5]; MJ1316 RNA cyclic group end recognition domain [PF04457.14, score=83.3]; 2'-5' RNA ligase superfamily [PF13563.8, score=24.3]; LigT like Phosphoesterase [PF02834.18, score=22.1]} {Human: ENSG00000273574, LENG9, leukocyte receptor cluster member 9, [RH, Score=99.8, Expect=1e-21]; ENSG00000274495, LENG9, leukocyte receptor cluster member 9, [RH, Score=99.8, Expect=1e-21]} {Mouse: ENSMUSG00000043432, Leng9, leukocyte receptor cluster (LRC) member 9, [RH, Score=117, Expect=1e-27]} {RNA1509_33006, RNA1509_41500, RNA1509_50306} {RNA1310_7334.1, RNA1509_33006, RNA1509_41500, RNA1509_50306} {RNA1509_33006, RNA1509_41500, RNA1509_50306, RNA815_22553}
2. MligTC455_47575 203 4.23 Mlig455_068827

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.457

MAN1C1 1.739 - - - 0.955 0.784 - Mlig455_068827 {REF} {Length: 3468} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=378.5]} {Human: ENSG00000117643, MAN1C1, mannosidase alpha class 1C member 1, [Score=268, Expect=7e-82]; ENSG00000198162, MAN1A2, mannosidase alpha class 1A member 2, [Score=268, Expect=2e-81]} {Mouse: ENSMUSG00000037306, Man1c1, mannosidase, alpha, class 1C, member 1, [Score=267, Expect=2e-81]; ENSMUSG00000008763, Man1a2, mannosidase, alpha, class 1A, member 2, [Score=267, Expect=2e-81]; ENSMUSG00000003746, Man1a, mannosidase 1, alpha, [Score=264, Expect=6e-80]} {Dmel: FBgn0259170, alpha-Man-Ia, alpha-Mannosidase class I a, [Score=268, Expect=1e-81]} {Celegans: WBGene00008258, mans-2, Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5, [Score=250, Expect=1e-75]} {Smed: dd_Smed_v6_6801_0_1, dd_Smed_v6_6801_0_1, [Score=267, Expect=3e-82]} {RNA1509_48511, RNA1509_9530} {RNA1310_9474.1, RNA1509_48511, RNA1509_9530} {RNA1509_48511, RNA1509_9530, RNA815_6962}
3. MligTC455_16734 561 11.68 Mlig455_000699, Mlig455_000753

Neo: -

Age: -

ZSWIM2 1.685 0.733 - - - - 0.952

Mlig455_000699 {REF} {Length: 2116} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=43.3]; Zinc finger, ZZ type [PF00569.19, score=34.5]; RING-like zinc finger [PF17123.7, score=25.9]; SWIM zinc finger [PF04434.19, score=24.9]} {Human: ENSG00000163012, ZSWIM2, zinc finger SWIM-type containing 2, [RH, Score=265, Expect=1e-80]} {Mouse: ENSMUSG00000034552, Zswim2, zinc finger SWIM-type containing 2, [RH, Score=269, Expect=4e-82]} {Smed: dd_Smed_v6_14099_0_1, dd_Smed_v6_14099_0_1, [RH, Score=369, Expect=2e-122]} {RNA1509_47358} {RNA1310_22319.1, RNA1509_47358} {RNA1509_47358, RNA815_45244}

Mlig455_000753 {REF} {Length: 2116} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=43.3]; Zinc finger, ZZ type [PF00569.19, score=35.0]; RING-like zinc finger [PF17123.7, score=25.9]; SWIM zinc finger [PF04434.19, score=24.9]} {Human: ENSG00000163012, ZSWIM2, zinc finger SWIM-type containing 2, [RH, Score=266, Expect=1e-80]} {Mouse: ENSMUSG00000034552, Zswim2, zinc finger SWIM-type containing 2, [RH, Score=269, Expect=5e-82]} {Smed: dd_Smed_v6_14099_0_1, dd_Smed_v6_14099_0_1, [RH, Score=368, Expect=5e-122]} {RNA1509_47358} {RNA1310_22319.1} {RNA815_45244}
4. MligTC455_43497 647 13.47 Mlig455_029738, Mlig455_034882, Mlig455_034894

Neo: -

Age: -

Region-enriched R2: 2.902/0.02617

RABGGTA 0.962 - - - - - 0.962

Mlig455_029738 {REF} {Length: 3151} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=108.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.8]; Leucine rich repeat [PF13855.8, score=23.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.4]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=194, Expect=4e-54]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=194, Expect=4e-54]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [RH, Score=186, Expect=2e-51]} {Dmel: FBgn0037293, CG12007, [RH, Score=156, Expect=6e-41]} {Celegans: WBGene00019778, M57.2, [RH, Score=145, Expect=5e-37]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [RH, Score=188, Expect=2e-52]} {RNA1509_17726, RNA1509_41376, RNA1509_59074} {RNA1310_7973, RNA1509_17726, RNA1509_41376, RNA1509_59074} {RNA1509_17726, RNA1509_41376, RNA1509_59074, RNA815_12806}

Mlig455_034882 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=105.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.8]; Leucine rich repeat [PF13855.8, score=23.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=18.8]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=203, Expect=2e-57]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=203, Expect=2e-57]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [RH, Score=197, Expect=3e-55]} {Dmel: FBgn0037293, CG12007, [RH, Score=158, Expect=8e-42]} {Celegans: WBGene00019778, M57.2, [RH, Score=145, Expect=3e-37]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [RH, Score=182, Expect=2e-50]} {RNA1509_17726} {RNA1310_7973} {RNA815_12806}

Mlig455_034894 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=107.0]; Protein of unknown function (DUF2722) [PF10846.10, score=19.8]; Copper transport outer membrane protein, MctB [PF11382.10, score=18.9]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=170, Expect=1e-47]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=170, Expect=1e-47]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [Score=169, Expect=3e-46]} {Dmel: FBgn0037293, CG12007, [RH, Score=159, Expect=5e-43]} {Celegans: WBGene00019778, M57.2, [RH, Score=149, Expect=4e-39]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [Score=145, Expect=4e-38]} {RNA1509_17726} {RNA1310_6752} {RNA815_12806}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA