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Results for MligTC455_43497

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43497 647 13.47 Mlig455_029738, Mlig455_034882, Mlig455_034894

Neo: -

Age: -

Region-enriched R2: 2.902/0.02617

 RABGGTA

Mlig455_029738 {REF} {Length: 3151} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=108.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.8]; Leucine rich repeat [PF13855.8, score=23.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.4]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=194, Expect=4e-54]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=194, Expect=4e-54]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [RH, Score=186, Expect=2e-51]} {Dmel: FBgn0037293, CG12007, [RH, Score=156, Expect=6e-41]} {Celegans: WBGene00019778, M57.2, [RH, Score=145, Expect=5e-37]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [RH, Score=188, Expect=2e-52]} {RNA1509_17726, RNA1509_41376, RNA1509_59074} {RNA1310_7973, RNA1509_17726, RNA1509_41376, RNA1509_59074} {RNA1509_17726, RNA1509_41376, RNA1509_59074, RNA815_12806}

Mlig455_034882 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=105.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.8]; Leucine rich repeat [PF13855.8, score=23.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=18.8]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=203, Expect=2e-57]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=203, Expect=2e-57]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [RH, Score=197, Expect=3e-55]} {Dmel: FBgn0037293, CG12007, [RH, Score=158, Expect=8e-42]} {Celegans: WBGene00019778, M57.2, [RH, Score=145, Expect=3e-37]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [RH, Score=182, Expect=2e-50]} {RNA1509_17726} {RNA1310_7973} {RNA815_12806}

Mlig455_034894 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=107.0]; Protein of unknown function (DUF2722) [PF10846.10, score=19.8]; Copper transport outer membrane protein, MctB [PF11382.10, score=18.9]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=170, Expect=1e-47]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=170, Expect=1e-47]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [Score=169, Expect=3e-46]} {Dmel: FBgn0037293, CG12007, [RH, Score=159, Expect=5e-43]} {Celegans: WBGene00019778, M57.2, [RH, Score=149, Expect=4e-39]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [Score=145, Expect=4e-38]} {RNA1509_17726} {RNA1310_6752} {RNA815_12806}

Cumulative graph for MligTC455_43497

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -8.267 4.173 0.01306 0.32237
RegionR2 2.902 4.173 0.00129 0.02617
RegionR3 1.572 4.173 0.05483 0.41119
RegionR4 -0.101 4.173 0.88207 1.00000
RegionR5 0.697 4.173 0.44476 0.80622
RegionR6 0.647 4.173 0.49489 1.00000
RegionR7 1.447 4.173 0.10195 0.60914
RegionR8 1.103 4.173 0.30057 0.93114

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.612 4.173 0.99978 1.00000
RegenerationR2 0.071 4.173 0.90703 1.00000
RegenerationR3 -0.262 4.173 0.72810 0.95716
RegenerationR4 0.893 4.173 0.22524 0.67373
RegenerationR5 1.059 4.173 0.12566 0.52913
RegenerationR6 0.898 4.173 0.22572 0.57107
RegenerationBL 0.907 4.173 0.23329 0.58543
RegenerationTP 1.858 4.173 0.01730 0.22522


Genes with expression patterns similar to MligTC455_43497

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43497 647 13.47 Mlig455_029738, Mlig455_034882, Mlig455_034894

Neo: -

Age: -

Region-enriched R2: 2.902/0.02617

 RABGGTA 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_029738 {REF} {Length: 3151} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=108.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.8]; Leucine rich repeat [PF13855.8, score=23.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.4]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=194, Expect=4e-54]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=194, Expect=4e-54]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [RH, Score=186, Expect=2e-51]} {Dmel: FBgn0037293, CG12007, [RH, Score=156, Expect=6e-41]} {Celegans: WBGene00019778, M57.2, [RH, Score=145, Expect=5e-37]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [RH, Score=188, Expect=2e-52]} {RNA1509_17726, RNA1509_41376, RNA1509_59074} {RNA1310_7973, RNA1509_17726, RNA1509_41376, RNA1509_59074} {RNA1509_17726, RNA1509_41376, RNA1509_59074, RNA815_12806}

Mlig455_034882 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=105.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.8]; Leucine rich repeat [PF13855.8, score=23.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=18.8]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=203, Expect=2e-57]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=203, Expect=2e-57]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [RH, Score=197, Expect=3e-55]} {Dmel: FBgn0037293, CG12007, [RH, Score=158, Expect=8e-42]} {Celegans: WBGene00019778, M57.2, [RH, Score=145, Expect=3e-37]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [RH, Score=182, Expect=2e-50]} {RNA1509_17726} {RNA1310_7973} {RNA815_12806}

Mlig455_034894 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=107.0]; Protein of unknown function (DUF2722) [PF10846.10, score=19.8]; Copper transport outer membrane protein, MctB [PF11382.10, score=18.9]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=170, Expect=1e-47]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=170, Expect=1e-47]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [Score=169, Expect=3e-46]} {Dmel: FBgn0037293, CG12007, [RH, Score=159, Expect=5e-43]} {Celegans: WBGene00019778, M57.2, [RH, Score=149, Expect=4e-39]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [Score=145, Expect=4e-38]} {RNA1509_17726} {RNA1310_6752} {RNA815_12806}
2. MligTC455_26840 353 7.36 Mlig455_020643

Neo: -

Age: -

 PIF1 1.739 - - 0.951 - 0.788 - Mlig455_020643 {REF} {Length: 12767} {Pfam: PIF1-like helicase [PF05970.16, score=324.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=197.6]; AAA domain [PF13604.8, score=47.7]; Helicase [PF02689.16, score=22.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=20.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=96.7, Expect=1e-19]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=90.1, Expect=7e-18]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=778, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=105, Expect=8e-23]} {RNA1509_48797} {RNA1310_4110} {RNA815_358.1}
3. MligTC455_28111 790 16.45 Mlig455_002387, Mlig455_009539, Mlig455_038667, Mlig455_051333, Mlig455_056392, Mlig455_070777

Neo: -

Age: -

 1.723 - - 0.951 - 0.772 -

Mlig455_002387 {REF} {Length: 1959} {NoTransDecoderORF} {RNA1509_35798} {RNA1310_15891} {RNA815_15623}

Mlig455_009539 {REF} {Length: 900} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_14078} {RNA815_15623}

Mlig455_038667 {REF} {Length: 1938} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_15623}

Mlig455_051333 {REF} {Length: 2762} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_13614.1} {RNA815_15623}

Mlig455_056392 {REF} {Length: 356} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_108088} {RNA815_16870}

Mlig455_070777 {REF} {Length: 237} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_108088} {RNA815_16870}
4. MligTC455_38739 39 0.81 Mlig455_014528

Neo: -

Age: -

 0.982 - - 0.982 - - - Mlig455_014528 {REF} {Length: 1250} {NoTransDecoderORF} {RNA1509_13586} {RNA1310_52607} {RNA815_2048.1}
5. MligTC455_17241 51 1.06 Mlig455_031641

Neo: -

Age: -

 0.981 - - 0.981 - - - Mlig455_031641 {REF} {Length: 1430} {NoTransDecoderORF} {RNA1509_31207} {RNA815_58763}
6. MligTC455_11494 99 2.06 Mlig455_055605

Neo: -

Age: Down-Up-Down

 HS3ST5 0.98 - - 0.980 - - - Mlig455_055605 {REF} {Length: 2196} {Pfam: Sulfotransferase domain [PF00685.29, score=91.7]; Sulfotransferase family [PF13469.8, score=45.8]} {Human: ENSG00000249853, HS3ST5, heparan sulfate-glucosamine 3-sulfotransferase 5, [RH, Score=256, Expect=1e-82]} {Mouse: ENSMUSG00000044499, Hs3st5, heparan sulfate (glucosamine) 3-O-sulfotransferase 5, [RH, Score=257, Expect=2e-83]} {Dmel: FBgn0031005, Hs3st-B, Heparan sulfate 3-O sulfotransferase-B, [Score=205, Expect=9e-63]} {Celegans: WBGene00044303, hst-3.2, Heparan SulphoTransferase, [Score=215, Expect=7e-68]} {Smed: dd_Smed_v6_81402_0_1, dd_Smed_v6_81402_0_1, [Score=123, Expect=7e-34]} {RNA1310_37118} {RNA815_58609}
7. MligTC455_47291 263 5.47 Mlig455_068275

Neo: -

Age: Down-Up-Up

 LENG9 0.962 - - - - - 0.962 Mlig455_068275 {REF} {Length: 2477} {TRANSSPLICED} {Pfam: AKAP7 2'5' RNA ligase-like domain [PF10469.11, score=109.5]; MJ1316 RNA cyclic group end recognition domain [PF04457.14, score=83.3]; 2'-5' RNA ligase superfamily [PF13563.8, score=24.3]; LigT like Phosphoesterase [PF02834.18, score=22.1]} {Human: ENSG00000273574, LENG9, leukocyte receptor cluster member 9, [RH, Score=99.8, Expect=1e-21]; ENSG00000274495, LENG9, leukocyte receptor cluster member 9, [RH, Score=99.8, Expect=1e-21]} {Mouse: ENSMUSG00000043432, Leng9, leukocyte receptor cluster (LRC) member 9, [RH, Score=117, Expect=1e-27]} {RNA1509_33006, RNA1509_41500, RNA1509_50306} {RNA1310_7334.1, RNA1509_33006, RNA1509_41500, RNA1509_50306} {RNA1509_33006, RNA1509_41500, RNA1509_50306, RNA815_22553}
8. MligTC455_50971 1166 24.29 Mlig455_045333

Neo: Int S/G2/M

Age: Down-Up-Down

Regeneration-enriched TP: 1.837
Regeneration-enriched R2: 1.623

 0.961 - - - - 0.961 - Mlig455_045333 {REF} {Length: 1639} {Pfam: Basic region leucine zipper [PF07716.17, score=32.1]} {RNA1509_10047} {RNA1310_15657.2} {RNA815_6640.1}
9. MligTC455_46499 3275 68.23 Mlig455_000184, Mlig455_058441

Neo: -

Age: -

 TXNL4A 0.958 - - - - 0.958 -

Mlig455_000184 {REF} {Length: 707} {TRANSSPLICED} {Pfam: Mitosis protein DIM1 [PF02966.18, score=221.0]; Thioredoxin [PF00085.22, score=24.5]} {Human: ENSG00000141759, TXNL4A, thioredoxin like 4A, [RH, Score=267, Expect=2e-93]} {Mouse: ENSMUSG00000057130, Txnl4a, thioredoxin-like 4A, [RH, Score=267, Expect=1e-93]} {Dmel: FBgn0031601, Dim1, [RH, Score=267, Expect=1e-93]} {Celegans: WBGene00235102, Y54G2A.75, [RH, Score=265, Expect=6e-93]} {Smed: dd_Smed_v6_5223_0_1, dd_Smed_v6_5223_0_1, [RH, Score=271, Expect=2e-95]} {RNA1509_28744} {RNA1310_59342} {RNA815_30323}

Mlig455_058441 {REF} {Length: 707} {TRANSSPLICED} {Pfam: Mitosis protein DIM1 [PF02966.18, score=221.0]; Thioredoxin [PF00085.22, score=24.5]} {Human: ENSG00000141759, TXNL4A, thioredoxin like 4A, [RH, Score=267, Expect=2e-93]} {Mouse: ENSMUSG00000057130, Txnl4a, thioredoxin-like 4A, [RH, Score=267, Expect=1e-93]} {Dmel: FBgn0031601, Dim1, [RH, Score=267, Expect=1e-93]} {Celegans: WBGene00235102, Y54G2A.75, [RH, Score=265, Expect=6e-93]} {Smed: dd_Smed_v6_5223_0_1, dd_Smed_v6_5223_0_1, [RH, Score=271, Expect=2e-95]} {RNA1509_19742, RNA1509_28744, RNA1509_38992, RNA1509_8847} {RNA1310_59342, RNA1509_19742, RNA1509_28744, RNA1509_38992, RNA1509_8847} {RNA1509_19742, RNA1509_28744, RNA1509_38992, RNA1509_8847, RNA815_30323}
10. MligTC455_47691 103 2.14 Mlig455_046561

Neo: -

Age: -

 UBTD2 0.957 - - 0.957 - - - Mlig455_046561 {REF} {Length: 3785} {Pfam: Ubiquitin-binding domain [PF16455.7, score=121.7]; Ubiquitin family [PF00240.25, score=33.5]} {Human: ENSG00000168246, UBTD2, ubiquitin domain containing 2, [RH, Score=218, Expect=9e-71]} {Mouse: ENSMUSG00000044949, Ubtd2, ubiquitin domain containing 2, [RH, Score=219, Expect=2e-71]} {Dmel: FBgn0264712, CG1172, [RH, Score=194, Expect=2e-61]} {Smed: dd_Smed_v6_3009_0_1, dd_Smed_v6_3009_0_1, [RH, Score=198, Expect=4e-63]} {RNA1509_42408} {RNA1310_33971} {RNA815_34971}
11. MligTC455_19770 2036 42.41 Mlig455_044236, Mlig455_044255

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.412/0.00042
Region-enriched R4: 1.323/0.00806

 VMA21 0.954 - - - - 0.954 -

Mlig455_044236 {REF} {Length: 791} {TRANSSPLICED} {Pfam: VMA21-like domain [PF09446.12, score=52.4]} {Human: ENSG00000160131, VMA21, VMA21, vacuolar ATPase assembly factor, [Score=45.4, Expect=1e-06]} {Mouse: ENSMUSG00000073131, Vma21, VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), [Score=43.5, Expect=3e-06]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [RH, Score=50.8, Expect=2e-09]} {Smed: dd_Smed_v6_2976_0_1, dd_Smed_v6_2976_0_1, [Score=48.1, Expect=1e-08]} {RNA1509_19501} {RNA1310_35174.1} {RNA815_21706.1}

Mlig455_044255 {REF} {Length: 805} {TRANSSPLICED} {Pfam: VMA21-like domain [PF09446.12, score=52.4]} {Human: ENSG00000160131, VMA21, VMA21, vacuolar ATPase assembly factor, [Score=45.4, Expect=1e-06]} {Mouse: ENSMUSG00000073131, Vma21, VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), [Score=43.5, Expect=3e-06]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [RH, Score=50.8, Expect=2e-09]} {Smed: dd_Smed_v6_2976_0_1, dd_Smed_v6_2976_0_1, [Score=48.1, Expect=1e-08]} {RNA1509_19501} {RNA1310_35174.2} {RNA815_21706.1}
12. MligTC455_15887 275 5.74 Mlig455_014231, Mlig455_044928

Neo: Irradiation

Age: -

 0.951 - - 0.951 - - -

Mlig455_014231 {REF} {Length: 3468} {TRANSSPLICED} {RNA1509_39956, RNA1509_46366} {RNA1310_5128.1, RNA1509_46366} {RNA1509_46366, RNA815_18027}

Mlig455_044928 {REF} {Length: 3268} {TRANSSPLICED} {RNA1509_39956} {RNA1310_5128.1} {RNA815_26969}
13. MligTC455_34571 52 1.08 Mlig455_070552

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.675

 SPEM3 0.95 - - 0.950 - - - Mlig455_070552 {REF} {Length: 1412} {Pfam: Cornifin (SPRR) family [PF02389.17, score=38.5]} {Human: ENSG00000284090, SPEM3, SPEM family member 3, [Score=57.4, Expect=3e-08]; ENSG00000283439, SPEM3, SPEM family member 3, [Score=57.4, Expect=3e-08]} {RNA1509_3061} {RNA1310_189.1} {RNA815_86.1}

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