Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_47314 | 1818 | 37.89 | Mlig455_058685 | Neo: - Age: - |
LUC7L | Mlig455_058685 {REF} {Length: 2493} {Pfam: LUC7 N_terminus [PF03194.17, score=239.7]} {Human: ENSG00000007392, LUC7L, LUC7 like, [RH, Score=303, Expect=6e-99]; ENSG00000146963, LUC7L2, LUC7 like 2, pre-mRNA splicing factor, [RH, Score=293, Expect=8e-95]} {Mouse: ENSMUSG00000024188, Luc7l, Luc7-like, [RH, Score=303, Expect=7e-99]; ENSMUSG00000029823, Luc7l2, LUC7-like 2 (S. cerevisiae), [RH, Score=290, Expect=3e-94]} {Dmel: FBgn0036734, CG7564, [RH, Score=306, Expect=2e-99]} {Celegans: WBGene00015207, B0495.8, [RH, Score=161, Expect=2e-45]} {Smed: dd_Smed_v6_4536_0_4, dd_Smed_v6_4536_0_4, [RH, Score=300, Expect=3e-99]} {RNA1509_894} {RNA1310_9024.1} {RNA815_807.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -2.198 | 5.282 | 0.05565 | 0.54760 | |
RegionR2 | 0.124 | 5.282 | 0.73084 | 1.00000 | |
RegionR3 | -0.203 | 5.282 | 0.55141 | 1.00000 | |
RegionR4 | 0.958 | 5.282 | 0.00776 | 0.05040 | |
RegionR5 | -0.039 | 5.282 | 0.90758 | 1.00000 | |
RegionR6 | 0.159 | 5.282 | 0.61005 | 1.00000 | |
RegionR7 | 0.762 | 5.282 | 0.02721 | 0.31131 | |
RegionR8 | 0.437 | 5.282 | 0.31039 | 0.94314 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 3.603 | 5.282 | 0.00148 | 0.20605 | |
RegenerationR2 | 0.41 | 5.282 | 0.14612 | 0.57775 | |
RegenerationR3 | 0.087 | 5.282 | 0.79009 | 0.97879 | |
RegenerationR4 | -0.615 | 5.282 | 0.05918 | 0.39055 | |
RegenerationR5 | -0.143 | 5.282 | 0.64510 | 0.92976 | |
RegenerationR6 | 0.124 | 5.282 | 0.69868 | 0.92372 | |
RegenerationBL | 0.19 | 5.282 | 0.57370 | 0.92671 | |
RegenerationTP | -0.636 | 5.282 | 0.09503 | 0.48319 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_47314 | 1818 | 37.89 | Mlig455_058685 | Neo: - Age: - |
LUC7L | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_058685 {REF} {Length: 2493} {Pfam: LUC7 N_terminus [PF03194.17, score=239.7]} {Human: ENSG00000007392, LUC7L, LUC7 like, [RH, Score=303, Expect=6e-99]; ENSG00000146963, LUC7L2, LUC7 like 2, pre-mRNA splicing factor, [RH, Score=293, Expect=8e-95]} {Mouse: ENSMUSG00000024188, Luc7l, Luc7-like, [RH, Score=303, Expect=7e-99]; ENSMUSG00000029823, Luc7l2, LUC7-like 2 (S. cerevisiae), [RH, Score=290, Expect=3e-94]} {Dmel: FBgn0036734, CG7564, [RH, Score=306, Expect=2e-99]} {Celegans: WBGene00015207, B0495.8, [RH, Score=161, Expect=2e-45]} {Smed: dd_Smed_v6_4536_0_4, dd_Smed_v6_4536_0_4, [RH, Score=300, Expect=3e-99]} {RNA1509_894} {RNA1310_9024.1} {RNA815_807.1} |
2. | MligTC455_37876 | 1905 | 39.68 | Mlig455_025693 | Neo: - Age: logFC(26M/2M)=0.314 |
1.768 | - | - | 0.816 | - | 0.952 | - | Mlig455_025693 {REF} {Length: 2210} {RNA1509_27839, RNA1509_4444, RNA1509_7821} {RNA1310_3967, RNA1509_27839, RNA1509_4444} {RNA1509_27839, RNA1509_4444, RNA815_2321.1} | |
3. | MligTC455_20013 | 777 | 16.18 | Mlig455_002334, Mlig455_002335, Mlig455_019758 | Neo: - Age: Down-Up-Up Region-enriched R2: 2.606/0.00058 |
STOM | 1.766 | - | - | - | - | 0.957 | 0.809 | Mlig455_002334 {REF} {Length: 2498} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=113.3]} {Human: ENSG00000148175, STOM, stomatin, [Score=290, Expect=1e-95]; ENSG00000133115, STOML3, stomatin like 3, [Score=290, Expect=8e-96]} {Mouse: ENSMUSG00000027744, Stoml3, stomatin (Epb7.2)-like 3, [Score=288, Expect=6e-95]; ENSMUSG00000026880, Stom, stomatin, [Score=286, Expect=3e-94]} {Dmel: FBgn0260657, CG42540, [Score=301, Expect=9e-99]} {Celegans: WBGene00003166, mec-2, Mechanosensory protein 2, [Score=305, Expect=1e-100]} {Smed: dd_Smed_v6_16206_0_1, dd_Smed_v6_16206_0_1, [RH, Score=376, Expect=2e-129]} {RNA1509_30153, RNA1509_46680} {RNA1310_12353, RNA1509_30153, RNA1509_46680} {RNA1509_30153, RNA1509_46680, RNA815_4616.1} Mlig455_002335 {REF} {Length: 1313} {NoTransDecoderORF} {RNA1509_20999} {RNA1310_66086} {RNA815_7817} Mlig455_019758 {REF} {Length: 2302} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=113.0]} {Human: ENSG00000148175, STOM, stomatin, [Score=290, Expect=9e-96]; ENSG00000133115, STOML3, stomatin like 3, [Score=290, Expect=8e-96]} {Mouse: ENSMUSG00000027744, Stoml3, stomatin (Epb7.2)-like 3, [Score=287, Expect=7e-95]; ENSMUSG00000026880, Stom, stomatin, [Score=286, Expect=3e-94]} {Dmel: FBgn0260657, CG42540, [Score=301, Expect=9e-99]} {Celegans: WBGene00003166, mec-2, Mechanosensory protein 2, [Score=305, Expect=1e-100]} {Smed: dd_Smed_v6_16206_0_1, dd_Smed_v6_16206_0_1, [RH, Score=377, Expect=5e-130]} {RNA1509_30153} {RNA1310_12353} {RNA815_4616.1} |
4. | MligTC455_47312 | 355 | 7.4 | Mlig455_010188 | Neo: - Age: Up-Down-Down |
LUC7L | 1.753 | - | - | - | - | 0.966 | 0.787 | Mlig455_010188 {REF} {Length: 2587} {Pfam: LUC7 N_terminus [PF03194.17, score=239.6]} {Human: ENSG00000007392, LUC7L, LUC7 like, [RH, Score=304, Expect=5e-99]; ENSG00000146963, LUC7L2, LUC7 like 2, pre-mRNA splicing factor, [RH, Score=293, Expect=9e-95]} {Mouse: ENSMUSG00000024188, Luc7l, Luc7-like, [RH, Score=303, Expect=9e-99]; ENSMUSG00000029823, Luc7l2, LUC7-like 2 (S. cerevisiae), [RH, Score=290, Expect=3e-94]} {Dmel: FBgn0036734, CG7564, [RH, Score=306, Expect=2e-99]} {Celegans: WBGene00015207, B0495.8, [RH, Score=161, Expect=3e-45]} {Smed: dd_Smed_v6_4536_0_4, dd_Smed_v6_4536_0_4, [RH, Score=300, Expect=3e-99]} {RNA1509_894} {RNA1310_9024.1} {RNA815_807.1} |
5. | MligTC455_34261 | 1189 | 24.78 | Mlig455_000150 | Neo: - Age: logFC(26M/2M)=-0.496 |
TRPM7 | 1.665 | - | - | - | - | 0.706 | 0.959 | Mlig455_000150 {REF} {Length: 6100} {Pfam: SLOG in TRPM [PF18139.3, score=129.1]; Ion transport protein [PF00520.33, score=55.3]; SLOG in TRPM, prokaryote [PF18171.3, score=45.0]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=372, Expect=3e-104]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=375, Expect=4e-105]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=235, Expect=7e-62]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=241, Expect=1e-63]} {Smed: dd_Smed_v6_17981_0_1, dd_Smed_v6_17981_0_1, [Score=1351, Expect=0.0]} {RNA1509_10435, RNA1509_11736} {RNA1310_742.1, RNA1509_10435, RNA1509_11736} {RNA1509_10435, RNA1509_11736, RNA815_639} |
6. | MligTC455_20533 | 1376 | 28.68 | Mlig455_029972 | Neo: - Age: - |
0.971 | - | - | - | - | - | 0.971 | Mlig455_029972 {REF} {Length: 2855} {Pfam: UPF0489 domain [PF12640.9, score=39.5]} {Dmel: FBgn0030191, CG15306, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_7217_0_1, dd_Smed_v6_7217_0_1, [RH, Score=52.8, Expect=6e-07]} {RNA1509_3030} {RNA1310_9364} {RNA815_2565.1} | |
7. | MligTC455_24896 | 589 | 12.28 | Mlig455_042692 | Neo: - Age: - |
PLCB4 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_042692 {REF} {Length: 7356} {TRANSSPLICED} {Pfam: Phosphatidylinositol-specific phospholipase C, Y domain [PF00387.21, score=119.1]; Protein of unknown function (DUF1154) [PF06631.13, score=49.3]; C2 domain [PF00168.32, score=24.4]} {Human: ENSG00000101333, PLCB4, phospholipase C beta 4, [Score=628, Expect=0.0]} {Mouse: ENSMUSG00000039943, Plcb4, phospholipase C, beta 4, [Score=630, Expect=0.0]} {Dmel: FBgn0262738, norpA, no receptor potential A, [Score=544, Expect=0.0]} {Celegans: WBGene00001177, egl-8, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta egl-8, [Score=558, Expect=0.0]} {Smed: dd_Smed_v6_3221_0_1, dd_Smed_v6_3221_0_1, [Score=651, Expect=0.0]} {RNA1509_34576, RNA1509_47225} {RNA1310_2178, RNA1509_34576} {RNA1509_34576, RNA815_911.1} |
8. | MligTC455_47052 | 3864 | 80.49 | Mlig455_070925 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.887 Regeneration-upregulated BL: 2.164 Regeneration-enriched BL: 2.164 |
0.967 | - | - | - | - | - | 0.967 | Mlig455_070925 {REF} {Length: 2072} {Pfam: F5/8 type C domain [PF00754.27, score=55.1]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [Score=52.0, Expect=1e-07]} {RNA1509_15305} {RNA1310_30437.2} {RNA815_12353} | |
9. | MligTC455_27623 | 200 | 4.16 | Mlig455_002045 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-1.053 Region-enriched R4: 3.078/0.02574 |
0.966 | - | - | - | - | - | 0.966 | Mlig455_002045 {REF} {Length: 1355} {RNA1509_31776} {RNA1310_7321.1} {RNA815_4667} | |
10. | MligTC455_15766 | 769 | 16.03 | Mlig455_020838, Mlig455_020943 | Neo: - Age: - Region-enriched R2: 1.912/0.04321 |
0.962 | - | - | - | - | - | 0.962 | Mlig455_020838 {REF} {Length: 1388} {RNA1310_25770.1} {RNA815_11095} Mlig455_020943 {REF} {Length: 1423} {RNA1310_25770.1} {RNA815_11095} |
|
11. | MligTC455_53239 | 733 | 15.27 | Mlig455_025537 | Neo: - Age: - Region-specific R2: 4.434 Region-enriched R2: 3.108/0.00000 |
0.962 | - | - | - | - | 0.962 | - | Mlig455_025537 {REF} {Length: 964} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=28.0]} {Dmel: FBgn0051221, CG31221, [RH, Score=70.9, Expect=5e-15]} {Celegans: WBGene00010290, F58H1.7, [Score=63.9, Expect=8e-13]} {Smed: dd_Smed_v6_5576_0_1, dd_Smed_v6_5576_0_1, [RH, Score=168, Expect=2e-53]} {RNA1509_58542} {RNA1310_40950} {RNA815_19778.1} | |
12. | MligTC455_38114 | 228 | 4.74 | Mlig455_012774, Mlig455_070139 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_012774 {REF} {Length: 1873} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_34010} {RNA815_56430} Mlig455_070139 {REF} {Length: 863} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_49425} {RNA815_65230} |
|
13. | MligTC455_38683 | 833 | 17.35 | Mlig455_012993 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_012993 {REF} {Length: 2594} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57935} {RNA1310_16719} {RNA815_22067.1} | |
14. | MligTC455_39396 | 469 | 9.77 | Mlig455_031203 | Neo: - Age: - Region-enriched R8: 3.069/0.00001 |
ARRDC3 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_031203 {REF} {Length: 1835} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=114.8]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=66.5]; Rgp1 [PF08737.12, score=23.6]} {Human: ENSG00000113369, ARRDC3, arrestin domain containing 3, [Score=112, Expect=5e-27]} {Mouse: ENSMUSG00000074794, Arrdc3, arrestin domain containing 3, [Score=113, Expect=1e-27]} {Dmel: FBgn0037517, CG10086, [RH, Score=85.1, Expect=1e-17]} {Celegans: WBGene00009579, arrd-6, ARRestin Domain protein, [RH, Score=322, Expect=2e-106]} {RNA1509_30037} {RNA1310_19411, RNA1509_30037} {RNA1509_30037, RNA815_7851} |
15. | MligTC455_26788 | 823 | 17.15 | Mlig455_009191 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.115/0.02113 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_009191 {REF} {Length: 11487} {TRANSSPLICED} {Dmel: FBgn0086690, Plp, Pericentrin-like protein, [Score=52.0, Expect=5e-06]} {RNA1509_5275} {RNA1310_379.1} {RNA815_407.1} | |
16. | MligTC455_47779 | 196 | 4.09 | Mlig455_018651 | Neo: - Age: Down-Down-Up Region-enriched R2: 5.953/0.04766 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_018651 {REF} {Length: 521} {RNA1509_48336} {RNA1310_73351} {RNA815_41082} | |
17. | MligTC455_26512 | 128 | 2.67 | Mlig455_069089 | Neo: - Age: Up-Down-Down |
PRKDC | 0.95 | - | - | - | - | 0.950 | - | Mlig455_069089 {REF} {Length: 15905} {Pfam: NUC194 domain [PF08163.14, score=230.9]; DNA-PKcs, CC5 [PF19704.1, score=218.9]; Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=139.7]; FAT domain [PF02259.25, score=33.6]; FATC domain [PF02260.22, score=27.0]; DDE superfamily endonuclease [PF13358.8, score=24.7]; Helix-turn-helix domain [PF13518.8, score=22.8]} {Human: ENSG00000253729, PRKDC, protein kinase, DNA-activated, catalytic subunit, [Score=652, Expect=0.0]} {Mouse: ENSMUSG00000022672, Prkdc, protein kinase, DNA activated, catalytic polypeptide, [Score=624, Expect=1e-178]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [Score=152, Expect=8e-36]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [Score=149, Expect=3e-35]} {Smed: dd_Smed_v6_8462_0_2, dd_Smed_v6_8462_0_2, [RH, Score=284, Expect=5e-76]} {RNA1509_11402, RNA1509_47977, RNA1509_60024} {RNA1310_372, RNA1509_47977, RNA1509_60024} {RNA1509_47977, RNA1509_60024, RNA815_3968} |
18. | MligTC455_26947 | 267 | 5.57 | Mlig455_057995 | Neo: - |
FBXO16 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_057995 {REF} {Length: 1643} {Pfam: F-box-like [PF12937.9, score=24.2]; F-box domain [PF00646.35, score=22.0]; Domain of unknown function (DUF4508) [PF14969.8, score=19.2]} {Human: ENSG00000214050, FBXO16, F-box protein 16, [RH, Score=161, Expect=6e-46]} {Mouse: ENSMUSG00000034532, Fbxo16, F-box protein 16, [RH, Score=155, Expect=3e-44]} {Dmel: FBgn0041171, ago, archipelago, [Score=78.6, Expect=2e-15]} {Smed: dd_Smed_v6_12714_0_1, dd_Smed_v6_12714_0_1, [RH, Score=201, Expect=4e-62]} {RNA1509_23593, RNA1509_48786} {RNA1310_11067, RNA1509_23593, RNA1509_48786} {RNA1509_23593, RNA1509_48786, RNA815_7658} |
19. | MligTC455_41101 | 260 | 5.41 | Mlig455_034223 | Neo: - Age: - |
JUN | 0.95 | - | - | - | - | - | 0.950 | Mlig455_034223 {REF} {Length: 1997} {Pfam: bZIP transcription factor [PF00170.23, score=33.8]; bZIP Maf transcription factor [PF03131.19, score=24.9]; Basic region leucine zipper [PF07716.17, score=22.5]} {Human: ENSG00000177606, JUN, Jun proto-oncogene, AP-1 transcription factor subunit, [Score=53.9, Expect=4e-08]; ENSG00000130522, JUND, JunD proto-oncogene, AP-1 transcription factor subunit, [Score=53.5, Expect=5e-08]} {Mouse: ENSMUSG00000052684, Jun, jun proto-oncogene, [Score=53.9, Expect=2e-08]; ENSMUSG00000071076, Jund, jun D proto-oncogene, [Score=53.1, Expect=5e-08]; ENSMUSG00000110974, Jund, jun D proto-oncogene, [Score=53.1, Expect=5e-08]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=57.0, Expect=1e-09]} {Celegans: WBGene00012005, jun-1, Transcription factor jun-1, [Score=47.0, Expect=2e-06]} {Smed: dd_Smed_v6_5875_0_1, dd_Smed_v6_5875_0_1, [Score=49.7, Expect=2e-07]} {RNA1509_19720} {RNA1310_26812} {RNA815_12638} |
20. | MligTC455_48489 | 332 | 6.91 | Mlig455_013844 | Neo: - |
MX2 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_013844 {REF} {Length: 3484} {Pfam: Dynamin family [PF00350.25, score=88.9]; Dynamin central region [PF01031.22, score=31.1]; Dynamin GTPase effector domain [PF02212.20, score=25.1]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=113, Expect=1e-25]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=95.5, Expect=5e-20]; ENSMUSG00000000386, Mx1, MX dynamin-like GTPase 1, [Score=92.4, Expect=3e-20]} {Dmel: FBgn0261276, Opa1, Optic atrophy 1, [Score=72.0, Expect=1e-12]} {Celegans: WBGene00001134, eat-3, [Score=76.3, Expect=4e-14]} {Smed: dd_Smed_v6_8582_0_1, dd_Smed_v6_8582_0_1, [Score=84.3, Expect=5e-19]} {RNA1509_6344} {RNA1310_8723, RNA1509_6344} {RNA1509_6344, RNA815_3559} |