M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_27623

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27623 200 4.16 Mlig455_002045

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.053

Region-enriched R4: 3.078/0.02574

 Mlig455_002045 {REF} {Length: 1355} {RNA1509_31776} {RNA1310_7321.1} {RNA815_4667}

Cumulative graph for MligTC455_27623

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.746 2.289 0.17295 0.79867
RegionR2 -1.287 2.289 0.99408 1.00000
RegionR3 0.254 2.289 0.75665 1.00000
RegionR4 3.078 2.289 0.00321 0.02574
RegionR5 1.221 2.289 0.20959 0.50544
RegionR6 0.875 2.289 0.39035 0.96484
RegionR7 1.44 2.289 0.19739 0.80406
RegionR8 0.165 2.289 0.82304 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 7.825 2.289 0.03431 0.64695
RegenerationR2 1.823 2.289 0.00120 0.05121
RegenerationR3 0.085 2.289 0.90949 1.00000
RegenerationR4 -0.404 2.289 0.58328 0.90630
RegenerationR5 -0.869 2.289 0.24173 0.67548
RegenerationR6 -0.556 2.289 0.47256 0.78609
RegenerationBL -0.599 2.289 0.53146 0.89128
RegenerationTP 0.282 2.289 0.78860 1.00000


Genes with expression patterns similar to MligTC455_27623

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27623 200 4.16 Mlig455_002045

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.053

Region-enriched R4: 3.078/0.02574

 4 - - 1.000 1.000 1.000 1.000 Mlig455_002045 {REF} {Length: 1355} {RNA1509_31776} {RNA1310_7321.1} {RNA815_4667}
2. MligTC455_29519 3279 68.32 Mlig455_031863, Mlig455_049727

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.122

 1.891 - - - 0.909 - 0.982

Mlig455_031863 {REF} {Length: 2619} {RNA1509_1508, RNA1509_19114, RNA1509_36743} {RNA1310_7321.1, RNA1509_19114, RNA1509_36743} {RNA1509_19114, RNA1509_36743, RNA815_4667}

Mlig455_049727 {REF} {Length: 1716} {NoTransDecoderORF} {RNA1509_31776, RNA1509_49580} {RNA1310_7321.1, RNA1509_49580} {RNA1509_49580, RNA815_4667}
3. MligTC455_29019 2780 57.92 Mlig455_047569

Neo: -

Age: -

Regeneration-enriched R3: 3.253
Regeneration-enriched TP: 3.198
Regeneration-enriched BL: 3.042
Regeneration-enriched R2: 2.854

 1.862 - - - - 0.906 0.956 Mlig455_047569 {REF} {Length: 4815} {TRANSSPLICED} {RNA1509_45988} {RNA1310_79684} {RNA815_44017}
4. MligTC455_42351 126 2.62 Mlig455_014089

Neo: -

Age: Up-Down-Down

 BMP1 1.822 - - - 0.853 0.969 - Mlig455_014089 {REF} {Length: 6334} {Pfam: CUB domain [PF00431.22, score=147.3]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=107, Expect=7e-23]} {Mouse: ENSMUSG00000053626, Tll1, tolloid-like, [Score=97.8, Expect=3e-20]; ENSMUSG00000025013, Tll2, tolloid-like 2, [Score=95.9, Expect=1e-19]} {Dmel: FBgn0261262, CG42613, [Score=274, Expect=4e-77]} {Celegans: WBGene00002977, lev-10, LEV-10B, [Score=235, Expect=6e-65]} {Smed: dd_Smed_v6_11447_0_1, dd_Smed_v6_11447_0_1, [Score=401, Expect=2e-123]} {RNA1509_7178} {RNA1310_25466} {RNA815_477.1}
5. MligTC455_23598 236 4.92 Mlig455_025573

Neo: -

Age: Up-Down-Down

Region-enriched R8: 3.347/0.00904

Regeneration-downregulated BL: -7.152

Regeneration-depleted BL: -7.152

 FBN1 1.789 - - - 0.824 0.965 - Mlig455_025573 {REF} {Length: 8300} {Pfam: Calcium-binding EGF domain [PF07645.17, score=308.8]; Complement Clr-like EGF-like [PF12662.9, score=240.6]; Coagulation Factor Xa inhibitory site [PF14670.8, score=137.8]; EGF domain [PF12947.9, score=103.1]; EGF-like domain [PF00008.29, score=67.3]; Human growth factor-like EGF [PF12661.9, score=42.0]; Thrombospondin type 1 domain [PF00090.21, score=27.9]; MSP1 EGF domain 1 [PF12946.9, score=23.5]} {Human: ENSG00000166147, FBN1, fibrillin 1, [Score=274, Expect=5e-73]; ENSG00000138829, FBN2, fibrillin 2, [Score=265, Expect=2e-70]; ENSG00000142449, FBN3, fibrillin 3, [Score=263, Expect=1e-69]} {Mouse: ENSMUSG00000027204, Fbn1, fibrillin 1, [Score=291, Expect=2e-78]} {Dmel: FBgn0035798, frac, faulty attraction, [RH, Score=235, Expect=8e-62]} {Celegans: WBGene00001403, fbl-1, Fibulin-1, [Score=165, Expect=2e-41]} {Smed: dd_Smed_v6_2649_0_2, dd_Smed_v6_2649_0_2, [Score=292, Expect=8e-79]} {RNA1509_13106} {RNA1310_487} {RNA815_5734}
6. MligTC455_51685 1772 36.92 Mlig455_014570, Mlig455_070254

Neo: -

Age: logFC(26M/2M)=-0.509

 1.768 - - - 0.799 0.969 -

Mlig455_014570 {REF} {Length: 1094} {RNA1509_14433, RNA1509_47733} {RNA1310_36028, RNA1509_47733} {RNA1509_47733, RNA815_17484}

Mlig455_070254 {REF} {Length: 1092} {RNA1509_14433, RNA1509_33461} {RNA1310_36028, RNA1509_14433, RNA1509_33461} {RNA1509_14433, RNA1509_33461, RNA815_17484}
7. MligTC455_45703 433 9.03 Mlig455_018343

Neo: -

Age: -

Region-enriched R2: 1.674/0.02931

 ADAM12 1.74 - - - 0.772 0.968 - Mlig455_018343 {REF} {Length: 4207} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=123.1]; Disintegrin [PF00200.25, score=73.1]; Metallo-peptidase family M12 [PF13688.8, score=48.1]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=40.5]; ADAM cysteine-rich [PF08516.14, score=39.9]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=39.4]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=37.8]} {Human: ENSG00000148848, ADAM12, ADAM metallopeptidase domain 12, [Score=231, Expect=4e-64]; ENSG00000149451, ADAM33, ADAM metallopeptidase domain 33, [Score=230, Expect=2e-63]; ENSG00000168615, ADAM9, ADAM metallopeptidase domain 9, [Score=229, Expect=9e-64]; ENSG00000139985, ADAM21, ADAM metallopeptidase domain 21, [Score=224, Expect=1e-61]; ENSG00000069206, ADAM7, ADAM metallopeptidase domain 7, [Score=222, Expect=1e-60]; ENSG00000042980, ADAM28, ADAM metallopeptidase domain 28, [Score=222, Expect=1e-60]} {Mouse: ENSMUSG00000054555, Adam12, a disintegrin and metallopeptidase domain 12 (meltrin alpha), [Score=228, Expect=3e-62]; ENSMUSG00000014725, Adam28, a disintegrin and metallopeptidase domain 28, [Score=226, Expect=4e-62]; ENSMUSG00000031555, Adam9, a disintegrin and metallopeptidase domain 9 (meltrin gamma), [Score=224, Expect=3e-61]} {Dmel: FBgn0265140, Meltrin, [Score=247, Expect=1e-68]} {Celegans: WBGene00000074, adm-2, ADAM (Disintegrin plus metalloprotease) family, [Score=219, Expect=3e-59]} {Smed: dd_Smed_v6_5143_0_1, dd_Smed_v6_5143_0_1, [Score=222, Expect=6e-60]} {RNA1509_54780, RNA1509_7145} {RNA1310_4464.2, RNA1509_54780} {RNA1509_54780, RNA815_1440.1}
8. MligTC455_54199 49 1.01 Mlig455_034715, Mlig455_067590

Neo: -

Age: -

Region-enriched R4: 5.064/0.03900

Regeneration-downregulated R4: -6.361

Regeneration-depleted R4: -6.361

 0.988 - - - - 0.988 -

Mlig455_034715 {REF} {Length: 5399} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=41.4]} {Smed: dd_Smed_v6_16515_0_1, dd_Smed_v6_16515_0_1, [Score=94.4, Expect=2e-21]} {RNA1310_64595} {RNA815_44335}

Mlig455_067590 {REF} {Length: 3463} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=27.2]} {Smed: dd_Smed_v6_20712_0_1, dd_Smed_v6_20712_0_1, [Score=74.3, Expect=5e-15]} {RNA1310_64595} {RNA815_44335}
9. MligTC455_20533 1376 28.68 Mlig455_029972

Neo: -

Age: -

 0.981 - - - - - 0.981 Mlig455_029972 {REF} {Length: 2855} {Pfam: UPF0489 domain [PF12640.9, score=39.5]} {Dmel: FBgn0030191, CG15306, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_7217_0_1, dd_Smed_v6_7217_0_1, [RH, Score=52.8, Expect=6e-07]} {RNA1509_3030} {RNA1310_9364} {RNA815_2565.1}
10. MligTC455_45942 18 0.37 Mlig455_028863

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_028863 {REF} {Length: 1187} {Pfam: Receptor family ligand binding region [PF01094.30, score=44.8]}
11. MligTC455_47052 3864 80.49 Mlig455_070925

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.887

Regeneration-upregulated BL: 2.164

Regeneration-enriched BL: 2.164

 0.98 - - - - - 0.980 Mlig455_070925 {REF} {Length: 2072} {Pfam: F5/8 type C domain [PF00754.27, score=55.1]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [Score=52.0, Expect=1e-07]} {RNA1509_15305} {RNA1310_30437.2} {RNA815_12353}
12. MligTC455_30192 1664 34.66 Mlig455_026693

Neo: -

Age: -

 FOXRED2 0.977 - - - - - 0.977 Mlig455_026693 {REF} {Length: 18036} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=147.7]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=45.8]; HI0933-like protein [PF03486.16, score=31.1]; FAD dependent oxidoreductase [PF01266.26, score=26.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=25.0]; FAD binding domain [PF01494.21, score=22.8]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=22.5]; Flavin containing amine oxidoreductase [PF01593.26, score=21.9]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.1]} {Human: ENSG00000100350, FOXRED2, FAD dependent oxidoreductase domain containing 2, [RH, Score=493, Expect=4e-167]} {Mouse: ENSMUSG00000016552, Foxred2, FAD-dependent oxidoreductase domain containing 2, [RH, Score=498, Expect=3e-169]} {Celegans: WBGene00001479, fmo-4, Flavin-containing monooxygenase, [Score=53.5, Expect=4e-07]} {Smed: dd_Smed_v6_12138_0_1, dd_Smed_v6_12138_0_1, [RH, Score=474, Expect=4e-161]} {RNA1509_13675, RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978} {RNA1310_861.1, RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978} {RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978, RNA815_570.1}
13. MligTC455_15766 769 16.03 Mlig455_020838, Mlig455_020943

Neo: -

Age: -

Region-enriched R2: 1.912/0.04321

 0.975 - - - - - 0.975

Mlig455_020838 {REF} {Length: 1388} {RNA1310_25770.1} {RNA815_11095}

Mlig455_020943 {REF} {Length: 1423} {RNA1310_25770.1} {RNA815_11095}
14. MligTC455_43307 242 5.04 Mlig455_061239

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_061239 {REF} {Length: 792} {NoTransDecoderORF} {RNA1509_38062} {RNA1310_36873} {RNA815_8442.1}
15. MligTC455_03783 17 0.35 Mlig455_016031

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_016031 {REF} {Length: 1606} {NoTransDecoderORF} {RNA1310_73098} {RNA815_38003}
16. MligTC455_28046 217 4.52 Mlig455_054081

Neo: -

Age: Down-Down-Up

 0.97 - - - - 0.970 - Mlig455_054081 {REF} {Length: 2315} {RNA1509_14175} {RNA1310_16956} {RNA815_8462}
17. MligTC455_12048 141 2.95 Mlig455_032190, Mlig455_051443

Neo: -

Age: -

 METAP1 0.968 - - - - 0.968 -

Mlig455_032190 {REF} {Length: 2315} {Pfam: Metallopeptidase family M24 [PF00557.26, score=180.5]; zf-MYND-like zinc finger, mRNA-binding [PF15801.7, score=64.9]} {Human: ENSG00000164024, METAP1, methionyl aminopeptidase 1, [RH, Score=468, Expect=2e-164]} {Mouse: ENSMUSG00000005813, Metap1, methionyl aminopeptidase 1, [RH, Score=464, Expect=2e-163]} {Dmel: FBgn0039219, CG13630, [RH, Score=481, Expect=4e-170]} {Celegans: WBGene00003129, map-1, Methionine AminoPeptidase, [RH, Score=446, Expect=1e-156]} {Smed: dd_Smed_v6_3555_0_1, dd_Smed_v6_3555_0_1, [RH, Score=507, Expect=2e-180]} {RNA1509_41540} {RNA1310_18545} {RNA815_38494.1}

Mlig455_051443 {REF} {Length: 2310} {Pfam: Metallopeptidase family M24 [PF00557.26, score=180.5]; zf-MYND-like zinc finger, mRNA-binding [PF15801.7, score=67.1]; MYND finger [PF01753.20, score=19.0]} {Human: ENSG00000164024, METAP1, methionyl aminopeptidase 1, [RH, Score=469, Expect=3e-165]} {Mouse: ENSMUSG00000005813, Metap1, methionyl aminopeptidase 1, [RH, Score=467, Expect=2e-164]} {Dmel: FBgn0039219, CG13630, [RH, Score=484, Expect=2e-171]} {Celegans: WBGene00003129, map-1, Methionine AminoPeptidase, [RH, Score=449, Expect=6e-158]} {Smed: dd_Smed_v6_3555_0_1, dd_Smed_v6_3555_0_1, [RH, Score=512, Expect=0.0]} {RNA1509_41540} {RNA1310_18545, RNA1509_41540} {RNA1509_41540, RNA815_38494.1}
18. MligTC455_34261 1189 24.78 Mlig455_000150

Neo: -

Age: logFC(26M/2M)=-0.496

 TRPM7 0.966 - - - - - 0.966 Mlig455_000150 {REF} {Length: 6100} {Pfam: SLOG in TRPM [PF18139.3, score=129.1]; Ion transport protein [PF00520.33, score=55.3]; SLOG in TRPM, prokaryote [PF18171.3, score=45.0]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=372, Expect=3e-104]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=375, Expect=4e-105]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=235, Expect=7e-62]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=241, Expect=1e-63]} {Smed: dd_Smed_v6_17981_0_1, dd_Smed_v6_17981_0_1, [Score=1351, Expect=0.0]} {RNA1509_10435, RNA1509_11736} {RNA1310_742.1, RNA1509_10435, RNA1509_11736} {RNA1509_10435, RNA1509_11736, RNA815_639}
19. MligTC455_47314 1818 37.89 Mlig455_058685

Neo: -

Age: -

 LUC7L 0.966 - - - - - 0.966 Mlig455_058685 {REF} {Length: 2493} {Pfam: LUC7 N_terminus [PF03194.17, score=239.7]} {Human: ENSG00000007392, LUC7L, LUC7 like, [RH, Score=303, Expect=6e-99]; ENSG00000146963, LUC7L2, LUC7 like 2, pre-mRNA splicing factor, [RH, Score=293, Expect=8e-95]} {Mouse: ENSMUSG00000024188, Luc7l, Luc7-like, [RH, Score=303, Expect=7e-99]; ENSMUSG00000029823, Luc7l2, LUC7-like 2 (S. cerevisiae), [RH, Score=290, Expect=3e-94]} {Dmel: FBgn0036734, CG7564, [RH, Score=306, Expect=2e-99]} {Celegans: WBGene00015207, B0495.8, [RH, Score=161, Expect=2e-45]} {Smed: dd_Smed_v6_4536_0_4, dd_Smed_v6_4536_0_4, [RH, Score=300, Expect=3e-99]} {RNA1509_894} {RNA1310_9024.1} {RNA815_807.1}
20. MligTC455_50300 79 1.64 Mlig455_034632

Neo: -

Age: logFC(26M/2M)=5.807

 0.965 - - - - 0.965 - Mlig455_034632 {REF} {Length: 4148} {RNA1509_40739} {RNA1310_7443.1} {RNA815_11554}
21. MligTC455_46286 73 1.52 Mlig455_013828

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_013828 {REF} {Length: 1252} {RNA815_49026}
22. MligTC455_48076 850 17.7 Mlig455_070531

Neo: -

Age: -

Region-enriched R2: 1.122/0.04544

 RNF185 0.964 - - - - 0.964 - Mlig455_070531 {REF} {Length: 1886} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.7]; RING-H2 zinc finger domain [PF12678.9, score=23.6]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.4]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=1e-51]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=168, Expect=7e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=2e-45]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=2e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431, RNA1509_35387, RNA1509_50361} {RNA1310_12532.1, RNA1509_12431, RNA1509_35387, RNA1509_50361} {RNA1509_12431, RNA1509_35387, RNA1509_50361, RNA815_8137.1}
23. MligTC455_43565 310 6.46 Mlig455_007763

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.408

 JAK1 0.963 - - - - - 0.963 Mlig455_007763 {REF} {Length: 8044} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=58.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=44.1]; Protein of unknown function (DUF2722) [PF10846.10, score=19.6]} {Human: ENSG00000162434, JAK1, Janus kinase 1, [Score=53.1, Expect=4e-06]} {Mouse: ENSMUSG00000028530, Jak1, Janus kinase 1, [Score=52.8, Expect=4e-06]} {Dmel: FBgn0024329, Mekk1, [Score=51.6, Expect=7e-06]} {Celegans: WBGene00010427, hpo-11, [Score=133, Expect=1e-31]} {Smed: dd_Smed_v6_5859_0_1, dd_Smed_v6_5859_0_1, [RH, Score=204, Expect=3e-53]} {RNA1509_7758} {RNA1310_5822} {RNA815_2990}
24. MligTC455_15231 363 7.57 Mlig455_011720

Neo: -

Age: Down-Up-Down

 0.962 - - - - 0.962 - Mlig455_011720 {REF} {Length: 1270} {Pfam: TMEM154 protein family [PF15102.8, score=19.2]} {Dmel: FBgn0003374, Sgs4, Salivary gland secretion 4, [Score=56.6, Expect=6e-09]} {RNA1509_38184} {RNA1310_28729} {RNA815_35960}
25. MligTC455_42693 531 11.07 Mlig455_023359, Mlig455_046943

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_023359 {REF} {Length: 1975} {TRANSSPLICED} {Smed: dd_Smed_v6_14631_0_1, dd_Smed_v6_14631_0_1, [RH, Score=66.2, Expect=5e-12]} {RNA1509_22410} {RNA1310_11875.1, RNA1509_22410} {RNA1509_22410, RNA815_20844}

Mlig455_046943 {REF} {Length: 1974} {TRANSSPLICED} {Smed: dd_Smed_v6_14631_0_1, dd_Smed_v6_14631_0_1, [RH, Score=66.6, Expect=3e-12]} {RNA1509_22410} {RNA1310_11875.1} {RNA815_20844}
26. MligTC455_54347 206 4.29 Mlig455_061086

Neo: -

Age: -

 ULK1 0.962 - - - - - 0.962 Mlig455_061086 {REF} {Length: 7837} {Pfam: Protein kinase domain [PF00069.27, score=98.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=65.6]; Fungal protein kinase [PF17667.3, score=25.3]} {Human: ENSG00000177169, ULK1, unc-51 like autophagy activating kinase 1, [Score=77.8, Expect=2e-14]; ENSG00000083290, ULK2, unc-51 like autophagy activating kinase 2, [Score=75.9, Expect=8e-14]; ENSG00000197168, NEK5, NIMA related kinase 5, [Score=75.1, Expect=1e-13]} {Mouse: ENSMUSG00000029512, Ulk1, unc-51 like kinase 1, [Score=77.8, Expect=1e-14]} {Dmel: FBgn0001079, fu, fused, [Score=74.3, Expect=9e-14]} {Celegans: WBGene00004044, plk-3, Serine/threonine-protein kinase plk-3, [Score=72.4, Expect=3e-13]} {Smed: dd_Smed_v6_5138_0_1, dd_Smed_v6_5138_0_1, [Score=73.6, Expect=9e-14]} {RNA1509_14320, RNA1509_47696, RNA1509_59722} {RNA1310_3761, RNA1509_47696, RNA1509_59722} {RNA1509_47696, RNA1509_59722, RNA815_1143}
27. MligTC455_38192 2040 42.5 Mlig455_006887

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_006887 {REF} {Length: 2301} {RNA1509_11591, RNA1509_28445, RNA1509_30934, RNA1509_33723, RNA1509_4251, RNA1509_54620} {RNA1310_13388.1, RNA1509_11591, RNA1509_28445, RNA1509_30934, RNA1509_33723, RNA1509_4251, RNA1509_54620} {RNA1509_11591, RNA1509_28445, RNA1509_30934, RNA1509_33723, RNA1509_4251, RNA1509_54620, RNA815_6463.1}
28. MligTC455_50664 138 2.87 Mlig455_035152

Neo: -

Age: -

Region-enriched R2: 3.712/0.01441

 LRRC74A 0.96 - - - - 0.960 - Mlig455_035152 {REF} {Length: 2523} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=68.7]; Leucine Rich Repeat [PF00560.35, score=35.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=31.8]; Leucine rich repeat [PF13855.8, score=22.7]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=146, Expect=1e-37]; ENSG00000187905, LRRC74B, leucine rich repeat containing 74B, [Score=144, Expect=1e-37]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=147, Expect=5e-38]; ENSMUSG00000022759, Lrrc74b, leucine rich repeat containing 74B, [Score=144, Expect=1e-37]} {Dmel: FBgn0033212, LRR, Leucine-rich repeat, [Score=51.6, Expect=2e-06]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=55.5, Expect=8e-08]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=147, Expect=6e-38]} {RNA1509_21228} {RNA1310_12842} {RNA815_17243}
29. MligTC455_28282 3298 68.72 Mlig455_024684

Neo: -

Age: -

Region-enriched R4: 1.043/0.00034

 CFAP20 0.959 - - - - 0.959 - Mlig455_024684 {REF} {Length: 1485} {Pfam: Protein of unknown function (DUF667) [PF05018.15, score=305.8]} {Human: ENSG00000070761, CFAP20, cilia and flagella associated protein 20, [RH, Score=367, Expect=5e-131]} {Mouse: ENSMUSG00000031796, Cfap20, cilia and flagella associated protein 20, [RH, Score=369, Expect=3e-132]} {Dmel: FBgn0032248, Bug22, Basal body up regulated gene 22, [RH, Score=366, Expect=7e-131]} {Celegans: WBGene00008288, C54C6.6, Cilia- and flagella-associated protein 20, [RH, Score=339, Expect=2e-120]} {Smed: dd_Smed_v6_4843_0_1, dd_Smed_v6_4843_0_1, [RH, Score=362, Expect=2e-129]} {RNA1509_12798, RNA1509_36550, RNA1509_48997, RNA1509_49635, RNA1509_7300} {RNA1310_26025.1, RNA1509_12798, RNA1509_36550, RNA1509_48997, RNA1509_49635, RNA1509_7300} {RNA1509_12798, RNA1509_36550, RNA1509_48997, RNA1509_49635, RNA1509_7300, RNA815_19042}
30. MligTC455_29237 1849 38.51 Mlig455_061754

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.515

Region-enriched R2: 1.588/0.01616

 ABCA1 0.959 - - - - 0.959 - Mlig455_061754 {REF} {Length: 8294} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=184.8]; ABC-2 family transporter protein [PF12698.9, score=179.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=68.8]; AAA domain [PF13476.8, score=23.8]} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [RH, Score=1255, Expect=0.0]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [RH, Score=1262, Expect=0.0]} {Dmel: FBgn0031170, CG1718, [Score=455, Expect=1e-130]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=391, Expect=5e-110]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [RH, Score=1169, Expect=0.0]} {RNA1509_742} {RNA1310_526.1} {RNA815_69.1}
31. MligTC455_52289 1304 27.17 Mlig455_040536, Mlig455_062101

Neo: -

Age: -

Region-enriched R2: 2.340/0.00741

 CDH23 0.959 - - - 0.959 - -

Mlig455_040536 {REF} {Length: 5566} {Pfam: Cadherin domain [PF00028.19, score=482.5]; Cadherin-like [PF08266.14, score=52.6]; Cadherin-like [PF16184.7, score=49.2]; RET Cadherin like domain 1 [PF17756.3, score=29.6]; Chlamydia polymorphic membrane protein middle domain [PF07548.13, score=19.7]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=405, Expect=4e-114]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=424, Expect=3e-120]} {Dmel: FBgn0036715, Cad74A, Cadherin 74A, [RH, Score=603, Expect=0.0]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=241, Expect=9e-64]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=291, Expect=2e-79]} {RNA1509_2629, RNA1509_34857} {RNA1310_891, RNA1509_2629, RNA1509_34857} {RNA1509_2629, RNA1509_34857, RNA815_261}

Mlig455_062101 {REF} {Length: 5552} {Pfam: Cadherin domain [PF00028.19, score=474.3]; Cadherin-like [PF08266.14, score=52.6]; Cadherin-like [PF16184.7, score=50.6]; RET Cadherin like domain 1 [PF17756.3, score=28.9]; Chlamydia polymorphic membrane protein middle domain [PF07548.13, score=19.5]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=417, Expect=4e-118]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=416, Expect=1e-117]} {Dmel: FBgn0036715, Cad74A, Cadherin 74A, [RH, Score=600, Expect=0.0]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=230, Expect=2e-60]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=286, Expect=6e-78]} {RNA1509_54845} {RNA1310_830, RNA1509_54845} {RNA1509_54845, RNA815_261}
32. MligTC455_46653 678 14.12 Mlig455_039570

Neo: -

Age: logFC(26M/2M)=0.275

 EPS8L2 0.958 - - - - - 0.958 Mlig455_039570 {REF} {Length: 3659} {TRANSSPLICED} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=42.2]; SH3 domain [PF00018.30, score=24.0]} {Human: ENSG00000177106, EPS8L2, EPS8 like 2, [RH, Score=158, Expect=5e-40]; ENSG00000151491, EPS8, epidermal growth factor receptor pathway substrate 8, [RH, Score=152, Expect=7e-38]} {Mouse: ENSMUSG00000015766, Eps8, epidermal growth factor receptor pathway substrate 8, [RH, Score=158, Expect=8e-40]; ENSMUSG00000025504, Eps8l2, EPS8-like 2, [RH, Score=154, Expect=1e-38]} {Dmel: FBgn0029095, aru, arouser, [Score=161, Expect=5e-41]} {Celegans: WBGene00001330, eps-8, EPS (Human endocytosis) related; Epidermal growth factor receptor pathway substrate 8 splice variant A, [RH, Score=213, Expect=6e-59]} {Smed: dd_Smed_v6_4256_0_1, dd_Smed_v6_4256_0_1, [RH, Score=79.3, Expect=3e-15]} {RNA1509_4398} {RNA1310_3514} {RNA815_6294}
33. MligTC455_22570 261 5.44 Mlig455_006659

Neo: -

Age: -

Region-enriched R2: 3.042/0.02689

 0.957 - - - - 0.957 - Mlig455_006659 {REF} {Length: 918} {NoTransDecoderORF} {RNA1509_10005} {RNA1310_56340} {RNA815_38610}
34. MligTC455_26269 294 6.12 Mlig455_056660

Neo: -

Age: Up-Up-Down

 0.957 - - - - - 0.957 Mlig455_056660 {REF} {Length: 6926} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=24.3]} {RNA1509_47204, RNA1509_52342, RNA1509_55209} {RNA1310_5450.1, RNA1509_47204, RNA1509_52342, RNA1509_55209} {RNA1509_47204, RNA1509_52342, RNA1509_55209, RNA815_7136.2}
35. MligTC455_29465 590 12.3 Mlig455_032544

Neo: -

Age: -

 MADD 0.956 - - - - 0.956 - Mlig455_032544 {REF} {Length: 6532} {Human: ENSG00000110514, MADD, MAP kinase activating death domain, [Score=384, Expect=2e-116]} {Mouse: ENSMUSG00000040687, Madd, MAP-kinase activating death domain, [Score=386, Expect=9e-118]} {Dmel: FBgn0030613, Rab3-GEF, Rab3 GDP-GTP exchange factor, [Score=325, Expect=1e-95]} {Celegans: WBGene00000086, aex-3, MAP kinase-activating death domain protein, [Score=266, Expect=6e-76]} {Smed: dd_Smed_v6_8355_0_5, dd_Smed_v6_8355_0_5, [Score=322, Expect=7e-99]} {RNA1509_28698} {RNA1310_18046, RNA1509_28698} {RNA1509_28698, RNA815_6666}
36. MligTC455_40360 564 11.75 Mlig455_060950

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=3.425

Regeneration-enriched R5: 6.585
Regeneration-enriched R2: 5.085

 AGRN 0.956 - - - 0.956 - - Mlig455_060950 {REF} {Length: 1959} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=110.8]; Kazal-type serine protease inhibitor domain [PF07648.17, score=94.2]} {Human: ENSG00000188157, AGRN, agrin, [Score=58.2, Expect=3e-08]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=54.7, Expect=3e-07]} {Celegans: WBGene00009257, F29G6.1, [Score=48.9, Expect=8e-06]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=51.2, Expect=1e-06]} {RNA1509_43736} {RNA1310_19594} {RNA815_11515}
37. MligTC455_51445 198 4.13 Mlig455_026524

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_026524 {REF} {Length: 1888} {RNA1509_20584} {RNA1310_9709.1, RNA1509_20584} {RNA1509_20584, RNA815_5646}
38. MligTC455_27301 1291 26.89 Mlig455_031019

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.229

 0.952 - - - - - 0.952 Mlig455_031019 {REF} {Length: 3754} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=177, Expect=9e-56]} {RNA1509_31486} {RNA1310_20686, RNA1509_31486} {RNA1509_31486, RNA815_9356.1}
39. MligTC455_36504 272 5.67 Mlig455_022817

Neo: -

Age: Down-Up-Down

 MAP2K6 0.952 - - - - 0.952 - Mlig455_022817 {REF} {Length: 3106} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=198.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=125.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000108984, MAP2K6, mitogen-activated protein kinase kinase 6, [Score=285, Expect=7e-94]; ENSG00000034152, MAP2K3, mitogen-activated protein kinase kinase 3, [Score=283, Expect=6e-93]} {Mouse: ENSMUSG00000020623, Map2k6, mitogen-activated protein kinase kinase 6, [Score=285, Expect=4e-94]; ENSMUSG00000018932, Map2k3, mitogen-activated protein kinase kinase 3, [Score=285, Expect=6e-94]} {Dmel: FBgn0261524, lic, licorne, [Score=273, Expect=1e-89]} {Celegans: WBGene00004758, sek-1, Dual specificity mitogen-activated protein kinase kinase sek-1, [Score=251, Expect=4e-81]} {Smed: dd_Smed_v6_1286_0_1, dd_Smed_v6_1286_0_1, [RH, Score=278, Expect=2e-91]} {RNA1509_59502, RNA1509_6345} {RNA1310_12367, RNA1509_59502, RNA1509_6345} {RNA1509_59502, RNA1509_6345, RNA815_5344.1}
40. MligTC455_41101 260 5.41 Mlig455_034223

Neo: -

Age: -

 JUN 0.952 - - - - - 0.952 Mlig455_034223 {REF} {Length: 1997} {Pfam: bZIP transcription factor [PF00170.23, score=33.8]; bZIP Maf transcription factor [PF03131.19, score=24.9]; Basic region leucine zipper [PF07716.17, score=22.5]} {Human: ENSG00000177606, JUN, Jun proto-oncogene, AP-1 transcription factor subunit, [Score=53.9, Expect=4e-08]; ENSG00000130522, JUND, JunD proto-oncogene, AP-1 transcription factor subunit, [Score=53.5, Expect=5e-08]} {Mouse: ENSMUSG00000052684, Jun, jun proto-oncogene, [Score=53.9, Expect=2e-08]; ENSMUSG00000071076, Jund, jun D proto-oncogene, [Score=53.1, Expect=5e-08]; ENSMUSG00000110974, Jund, jun D proto-oncogene, [Score=53.1, Expect=5e-08]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=57.0, Expect=1e-09]} {Celegans: WBGene00012005, jun-1, Transcription factor jun-1, [Score=47.0, Expect=2e-06]} {Smed: dd_Smed_v6_5875_0_1, dd_Smed_v6_5875_0_1, [Score=49.7, Expect=2e-07]} {RNA1509_19720} {RNA1310_26812} {RNA815_12638}
41. MligTC455_51487 154 3.22 Mlig455_053646

Neo: -

Age: Down-Up-Down

 0.952 - - - - - 0.952 Mlig455_053646 {REF} {Length: 1263} {RNA1310_21476.1} {RNA815_10714}
42. MligTC455_29236 1895 39.48 Mlig455_061724

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.397

Region-enriched R2: 1.598/0.01756

 ABCA1 0.951 - - - - 0.951 - Mlig455_061724 {REF} {Length: 9162} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=184.0]; ABC-2 family transporter protein [PF12698.9, score=183.1]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=68.8]; AAA domain [PF13476.8, score=23.5]} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [RH, Score=1259, Expect=0.0]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [RH, Score=1268, Expect=0.0]} {Dmel: FBgn0031170, CG1718, [Score=456, Expect=4e-131]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=395, Expect=3e-111]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [RH, Score=1178, Expect=0.0]} {RNA1509_742} {RNA1310_526.1} {RNA815_69.1}
43. MligTC455_29816 317 6.61 Mlig455_067302

Neo: -

Age: Up-Down-Down

 RNF31 0.951 - - - - 0.951 - Mlig455_067302 {REF} {Length: 6139} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=99.7]; IBR domain, a half RING-finger domain [PF01485.23, score=33.9]} {Human: ENSG00000285152, RNF31, ring finger protein 31, [RH, Score=308, Expect=2e-86]; ENSG00000092098, RNF31, ring finger protein 31, [RH, Score=308, Expect=2e-86]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=301, Expect=2e-84]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [RH, Score=256, Expect=3e-68]} {Smed: dd_Smed_v6_4025_0_1, dd_Smed_v6_4025_0_1, [RH, Score=180, Expect=9e-47]} {RNA1509_4535} {RNA1310_1489} {RNA815_1870.1}
44. MligTC455_20168 557 11.6 Mlig455_019129

Neo: -

Age: -

Region-enriched R2: 1.893/0.01121

 SPOP 0.95 - - - - - 0.950 Mlig455_019129 {REF} {Length: 3457} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=96.3]; MATH domain [PF00917.28, score=31.0]} {Human: ENSG00000121067, SPOP, speckle type BTB/POZ protein, [RH, Score=487, Expect=2e-171]; ENSG00000144228, SPOPL, speckle type BTB/POZ protein like, [RH, Score=484, Expect=2e-170]} {Mouse: ENSMUSG00000057522, Spop, speckle-type POZ protein, [RH, Score=487, Expect=1e-171]; ENSMUSG00000026771, Spopl, speckle-type POZ protein-like, [RH, Score=481, Expect=3e-169]} {Dmel: FBgn0264493, rdx, roadkill, [RH, Score=501, Expect=9e-177]} {Celegans: WBGene00011815, bath-43, BTB and MATH domain-containing protein 43, [RH, Score=468, Expect=3e-163]} {Smed: dd_Smed_v6_10149_0_1, dd_Smed_v6_10149_0_1, [RH, Score=331, Expect=2e-111]} {RNA1509_30292, RNA1509_39885, RNA1509_41275, RNA1509_60173, RNA1509_8118} {RNA1310_6726, RNA1509_30292, RNA1509_39885, RNA1509_41275, RNA1509_60173, RNA1509_8118} {RNA1509_30292, RNA1509_39885, RNA1509_41275, RNA1509_60173, RNA1509_8118, RNA815_9542}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA