Data search
Results for MligTC455_47350
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47350 | 121 | 2.53 | Mlig455_061845 | Neo: - Age: - |
DNMT3B | Mlig455_061845 {REF} {Length: 2275} {TRANSSPLICED} {Pfam: Cysteine rich ADD domain in DNMT3 [PF17980.3, score=29.7]} {Human: ENSG00000088305, DNMT3B, DNA methyltransferase 3 beta, [Score=89.0, Expect=1e-17]} {Mouse: ENSMUSG00000027478, Dnmt3b, DNA methyltransferase 3B, [Score=97.1, Expect=2e-20]; ENSMUSG00000082079, Dnmt3c, DNA methyltransferase 3C, [Score=94.7, Expect=1e-19]} {RNA1509_22614, RNA1509_23149} {RNA1310_10697.1, RNA1509_22614} {RNA1509_22614, RNA815_14886} |
Cumulative graph for MligTC455_47350
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.736 | 2.137 | 0.75809 | 1.00000 | |
| RegionR2 | 0.414 | 2.137 | 0.68091 | 1.00000 | |
| RegionR3 | -0.806 | 2.137 | 0.40262 | 0.93086 | |
| RegionR4 | -0.197 | 2.137 | 0.85756 | 1.00000 | |
| RegionR5 | 1.602 | 2.137 | 0.00831 | 0.05043 | |
| RegionR6 | 0.129 | 2.137 | 0.86904 | 1.00000 | |
| RegionR7 | -0.922 | 2.137 | 0.56274 | 1.00000 | |
| RegionR8 | -0.957 | 2.137 | 0.64728 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.655 | 2.137 | 0.50192 | 1.00000 | |
| RegenerationR2 | -0.402 | 2.137 | 0.60188 | 0.91658 | |
| RegenerationR3 | 1.47 | 2.137 | 0.09234 | 0.48963 | |
| RegenerationR4 | 1.463 | 2.137 | 0.06257 | 0.40028 | |
| RegenerationR5 | 0.532 | 2.137 | 0.35675 | 0.76875 | |
| RegenerationR6 | 1.005 | 2.137 | 0.21638 | 0.56063 | |
| RegenerationBL | 0.75 | 2.137 | 0.59529 | 0.94382 | |
| RegenerationTP | 0.028 | 2.137 | 0.98319 | 1.00000 |
Genes with expression patterns similar to MligTC455_47350
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47350 | 121 | 2.53 | Mlig455_061845 | Neo: - Age: - |
DNMT3B | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_061845 {REF} {Length: 2275} {TRANSSPLICED} {Pfam: Cysteine rich ADD domain in DNMT3 [PF17980.3, score=29.7]} {Human: ENSG00000088305, DNMT3B, DNA methyltransferase 3 beta, [Score=89.0, Expect=1e-17]} {Mouse: ENSMUSG00000027478, Dnmt3b, DNA methyltransferase 3B, [Score=97.1, Expect=2e-20]; ENSMUSG00000082079, Dnmt3c, DNA methyltransferase 3C, [Score=94.7, Expect=1e-19]} {RNA1509_22614, RNA1509_23149} {RNA1310_10697.1, RNA1509_22614} {RNA1509_22614, RNA815_14886} |
| 2. | MligTC455_12212 | 89 | 1.86 | Mlig455_044685 | Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 4.084/0.00005 |
2.5 | 0.805 | 0.744 | 0.951 | - | - | - | Mlig455_044685 {REF} {Length: 3776} {TRANSSPLICED} {Pfam: Myb/SANT-like DNA-binding domain [PF13837.8, score=25.9]; Myb-like DNA-binding domain [PF13921.8, score=19.1]; Myb/SANT-like DNA-binding domain [PF13873.8, score=18.7]} {RNA1509_24862, RNA1509_54105, RNA1509_56945} {RNA1310_24568, RNA1509_24862, RNA1509_54105, RNA1509_56945} {RNA1509_24862, RNA1509_54105, RNA1509_56945, RNA815_11589} | |
| 3. | MligTC455_16327 | 170 | 3.55 | Mlig455_045443 | Neo: - |
1.829 | - | - | 0.858 | - | 0.971 | - | Mlig455_045443 {REF} {Length: 2710} {TRANSSPLICED} {RNA1509_37962} {RNA1310_20237.1} {RNA815_18052} | |
| 4. | MligTC455_12810 | 194 | 4.04 | Mlig455_069903 | Neo: Irradiation Age: Up-Up-Down, logFC(26M/2M)=0.220 Region-enriched R5: 2.094/0.01518 |
1.785 | - | - | - | 0.820 | 0.965 | - | Mlig455_069903 {REF} {Length: 4228} {TRANSSPLICED} {Pfam: HAP1 N-terminal conserved region [PF04849.15, score=20.9]} {RNA1509_14533} {RNA1310_10263.1, RNA1509_14533} {RNA1509_14533, RNA815_2693.1} | |
| 5. | MligTC455_20485 | 2442 | 50.87 | Mlig455_000675, Mlig455_034183 | Neo: Irradiation Age: - Region-specific R5: 2.290 Region-enriched R5: 1.892/0.00001 |
GORASP2 | 1.763 | - | - | 0.959 | - | - | 0.804 | Mlig455_000675 {REF} {Length: 1584} {Pfam: GRASP55/65 PDZ-like domain [PF04495.16, score=169.2]; PDZ domain [PF17820.3, score=43.9]; PDZ domain [PF13180.8, score=41.3]; Tricorn protease PDZ domain [PF14685.8, score=24.4]; PDZ domain [PF00595.26, score=23.2]} {Human: ENSG00000115806, GORASP2, golgi reassembly stacking protein 2, [Score=168, Expect=3e-49]; ENSG00000114745, GORASP1, golgi reassembly stacking protein 1, [Score=161, Expect=1e-46]} {Mouse: ENSMUSG00000014959, Gorasp2, golgi reassembly stacking protein 2, [Score=169, Expect=4e-51]} {Dmel: FBgn0036919, Grasp65, [Score=164, Expect=7e-48]} {Celegans: WBGene00021536, Y42H9AR.1, [Score=142, Expect=2e-39]} {Smed: dd_Smed_v6_1209_0_1, dd_Smed_v6_1209_0_1, [Score=158, Expect=5e-47]} {RNA1509_27057} {RNA1310_23129.1} {RNA815_19396} Mlig455_034183 {REF} {Length: 1357} {Pfam: GRASP55/65 PDZ-like domain [PF04495.16, score=175.2]; PDZ domain [PF13180.8, score=39.3]; PDZ domain [PF17820.3, score=39.1]; Tricorn protease PDZ domain [PF14685.8, score=23.7]; PDZ domain [PF00595.26, score=21.5]} {Human: ENSG00000115806, GORASP2, golgi reassembly stacking protein 2, [Score=175, Expect=1e-51]; ENSG00000114745, GORASP1, golgi reassembly stacking protein 1, [Score=168, Expect=3e-49]} {Mouse: ENSMUSG00000014959, Gorasp2, golgi reassembly stacking protein 2, [Score=175, Expect=4e-52]} {Dmel: FBgn0036919, Grasp65, [Score=173, Expect=3e-51]} {Celegans: WBGene00021536, Y42H9AR.1, [Score=152, Expect=2e-43]} {Smed: dd_Smed_v6_1209_0_1, dd_Smed_v6_1209_0_1, [Score=163, Expect=7e-49]} {RNA1509_15544, RNA1509_27057} {RNA1310_23129.2, RNA1509_15544, RNA1509_27057} {RNA1509_15544, RNA1509_27057, RNA815_19396} |
| 6. | MligTC455_41057 | 629 | 13.1 | Mlig455_022788, Mlig455_022966 | Neo: Germline Age: logFC(26M/2M)=0.330 Region-enriched R5: 2.959/0.00000 |
BAG1 | 1.757 | - | - | - | - | 0.952 | 0.805 | Mlig455_022788 {REF} {Length: 877} {Pfam: Ubiquitin-like domain [PF18037.3, score=30.4]; Ubiquitin family [PF00240.25, score=22.9]} {Human: ENSG00000107262, BAG1, BCL2 associated athanogene 1, [Score=68.2, Expect=1e-13]} {Mouse: ENSMUSG00000028416, Bag1, BCL2-associated athanogene 1, [Score=57.0, Expect=1e-09]} {RNA1509_49198} {RNA1310_34002} {RNA815_14005.1} Mlig455_022966 {REF} {Length: 897} {Pfam: Ubiquitin-like domain [PF18037.3, score=31.3]; Ubiquitin family [PF00240.25, score=24.4]} {Human: ENSG00000107262, BAG1, BCL2 associated athanogene 1, [Score=66.2, Expect=8e-14]} {Mouse: ENSMUSG00000028416, Bag1, BCL2-associated athanogene 1, [Score=57.0, Expect=1e-10]} {RNA1509_49198} {RNA1310_34002} {RNA815_14005.1} |
| 7. | MligTC455_48887 | 342 | 7.12 | Mlig455_068740 | Neo: - Age: - Region-enriched R5: 2.022/0.00015 |
1.719 | - | 0.769 | 0.950 | - | - | - | Mlig455_068740 {REF} {Length: 2197} {TRANSSPLICED} {Pfam: Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=51.4]; Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=29.7]} {RNA1509_15686} {RNA1310_3343.1} {RNA815_561.1} | |
| 8. | MligTC455_15496 | 327 | 6.8 | Mlig455_039529 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.692 Region-enriched R5: 1.319/0.01278 |
1.697 | - | - | - | 0.743 | 0.954 | - | Mlig455_039529 {REF} {Length: 1710} {TRANSSPLICED} {RNA1509_40047} {RNA1310_21235.1, RNA1509_40047} {RNA1509_40047, RNA815_15373} | |
| 9. | MligTC455_49633 | 243 | 5.07 | Mlig455_061915 | Neo: - Age: - |
1.651 | - | - | - | 0.950 | - | 0.701 | Mlig455_061915 {REF} {Length: 1066} {RNA1509_13767} {RNA1310_26213} {RNA815_5574.1} | |
| 10. | MligTC455_22629 | 203 | 4.23 | Mlig455_012599 | Neo: - Age: - |
CAPZB | 0.956 | - | - | 0.956 | - | - | - | Mlig455_012599 {REF} {Length: 1813} {TRANSSPLICED} {Pfam: F-actin capping protein, beta subunit [PF01115.19, score=273.0]} {Human: ENSG00000077549, CAPZB, capping actin protein of muscle Z-line subunit beta, [Score=278, Expect=4e-93]} {Mouse: ENSMUSG00000028745, Capzb, capping protein (actin filament) muscle Z-line, beta, [Score=278, Expect=2e-93]} {Dmel: FBgn0011570, cpb, capping protein beta, [Score=273, Expect=1e-91]} {Celegans: WBGene00000293, cap-2, F-actin-capping protein subunit beta, [Score=253, Expect=8e-84]} {Smed: dd_Smed_v6_1165_0_1, dd_Smed_v6_1165_0_1, [Score=281, Expect=4e-95]} {RNA1509_26511} {RNA1310_18322.2} {RNA815_12071} |
| 11. | MligTC455_15651 | 59 | 1.23 | Mlig455_046263 | Neo: - Age: - |
DSTYK | 0.955 | - | - | 0.955 | - | - | - | Mlig455_046263 {REF} {Length: 4007} {Pfam: Protein kinase domain [PF00069.27, score=112.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=106.5]; Fungal protein kinase [PF17667.3, score=18.4]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=612, Expect=0.0]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=606, Expect=0.0]} {Dmel: FBgn0259680, Pkcdelta, Protein kinase C delta, [Score=81.6, Expect=2e-15]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=78.6, Expect=1e-14]} {Smed: dd_Smed_v6_4436_0_1, dd_Smed_v6_4436_0_1, [Score=533, Expect=7e-176]} {RNA1509_51957} {RNA1310_22897} {RNA815_9862} |
| 12. | MligTC455_25132 | 223 | 4.65 | Mlig455_038129, Mlig455_039796 | Neo: - Age: Down-Up-Up |
NME6 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_038129 {REF} {Length: 989} {TRANSSPLICED} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=93.6]} {Human: ENSG00000172113, NME6, NME/NM23 nucleoside diphosphate kinase 6, [Score=110, Expect=1e-30]} {Mouse: ENSMUSG00000032478, Nme6, NME/NM23 nucleoside diphosphate kinase 6, [Score=111, Expect=3e-31]} {Dmel: FBgn0030573, nmdyn-D6, [RH, Score=118, Expect=2e-34]} {Smed: dd_Smed_v6_12132_0_1, dd_Smed_v6_12132_0_1, [RH, Score=142, Expect=5e-44]} {RNA1509_58743} {RNA1310_32348.1, RNA1509_58743} {RNA1509_58743, RNA815_20328} Mlig455_039796 {REF} {Length: 1048} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=94.7]} {Human: ENSG00000172113, NME6, NME/NM23 nucleoside diphosphate kinase 6, [Score=112, Expect=5e-31]} {Mouse: ENSMUSG00000032478, Nme6, NME/NM23 nucleoside diphosphate kinase 6, [Score=111, Expect=4e-31]} {Dmel: FBgn0030573, nmdyn-D6, [RH, Score=120, Expect=6e-35]} {Smed: dd_Smed_v6_12132_0_1, dd_Smed_v6_12132_0_1, [RH, Score=142, Expect=7e-44]} {RNA1509_58743} {RNA1310_32348.1} {RNA815_20328} |
| 13. | MligTC455_15251 | 45 | 0.94 | Mlig455_044383 | Neo: Irradiation Age: - Region-enriched R5: 4.521/0.00071 |
GRIK3 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_044383 {REF} {Length: 2255} {TRANSSPLICED} {Pfam: Ligand-gated ion channel [PF00060.28, score=101.0]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=87.8]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=41.8]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=177, Expect=2e-46]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=169, Expect=1e-43]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=176, Expect=5e-46]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=169, Expect=1e-43]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [Score=246, Expect=8e-71]} {Celegans: WBGene00001618, glr-7, GLutamate Receptor family (AMPA), [Score=256, Expect=4e-76]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [Score=333, Expect=3e-103]} {RNA1310_10585} {RNA815_25648} |
| 14. | MligTC455_19491 | 492 | 10.25 | Mlig455_044032 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.849/0.00001 |
NELFA | 0.951 | - | - | 0.951 | - | - | - | Mlig455_044032 {REF} {Length: 3565} {Human: ENSG00000185049, NELFA, negative elongation factor complex member A, [RH, Score=86.7, Expect=4e-17]} {Mouse: ENSMUSG00000029111, Nelfa, negative elongation factor complex member A, Whsc2, [RH, Score=90.9, Expect=1e-18]} {Dmel: FBgn0038872, Nelf-A, Negative elongation factor A, [RH, Score=79.0, Expect=9e-15]} {Smed: dd_Smed_v6_8484_0_1, dd_Smed_v6_8484_0_1, [RH, Score=57.0, Expect=3e-08]} {RNA1509_7068} {RNA1310_4803.1, RNA1509_7068} {RNA1509_7068, RNA815_2462} |