Data search
Results for MligTC455_15251
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_15251 | 45 | 0.94 | Mlig455_044383 | Neo: Irradiation Age: - Region-enriched R5: 4.521/0.00071 |
GRIK3 | Mlig455_044383 {REF} {Length: 2255} {TRANSSPLICED} {Pfam: Ligand-gated ion channel [PF00060.28, score=101.0]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=87.8]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=41.8]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=177, Expect=2e-46]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=169, Expect=1e-43]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=176, Expect=5e-46]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=169, Expect=1e-43]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [Score=246, Expect=8e-71]} {Celegans: WBGene00001618, glr-7, GLutamate Receptor family (AMPA), [Score=256, Expect=4e-76]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [Score=333, Expect=3e-103]} {RNA1310_10585} {RNA815_25648} |
Cumulative graph for MligTC455_15251
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.372 | 1.489 | 0.99969 | 1.00000 | |
| RegionR2 | 3.434 | 1.489 | 0.08084 | 0.34845 | |
| RegionR3 | 1.327 | 1.489 | 0.37548 | 0.90876 | |
| RegionR4 | -1.302 | 1.489 | 0.90506 | 1.00000 | |
| RegionR5 | 4.521 | 1.489 | 0.00004 | 0.00071 | |
| RegionR6 | 3.212 | 1.489 | 0.03693 | 0.35890 | |
| RegionR7 | -2.044 | 1.489 | 0.99991 | 1.00000 | |
| RegionR8 | -2.776 | 1.489 | 0.99974 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.437 | 1.489 | 0.99988 | 1.00000 | |
| RegenerationR2 | -1.932 | 1.489 | 0.08364 | 0.46436 | |
| RegenerationR3 | 0.666 | 1.489 | 0.53474 | 0.87445 | |
| RegenerationR4 | 0.677 | 1.489 | 0.51759 | 0.87859 | |
| RegenerationR5 | -1.772 | 1.489 | 0.02872 | 0.28582 | |
| RegenerationR6 | -3.125 | 1.489 | 0.01612 | 0.15704 | |
| RegenerationBL | -2.144 | 1.489 | 0.99969 | 1.00000 | |
| RegenerationTP | -0.247 | 1.489 | 0.99993 | 1.00000 |
Genes with expression patterns similar to MligTC455_15251
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_15251 | 45 | 0.94 | Mlig455_044383 | Neo: Irradiation Age: - Region-enriched R5: 4.521/0.00071 |
GRIK3 | 5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_044383 {REF} {Length: 2255} {TRANSSPLICED} {Pfam: Ligand-gated ion channel [PF00060.28, score=101.0]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=87.8]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=41.8]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=177, Expect=2e-46]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=169, Expect=1e-43]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=176, Expect=5e-46]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=169, Expect=1e-43]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [Score=246, Expect=8e-71]} {Celegans: WBGene00001618, glr-7, GLutamate Receptor family (AMPA), [Score=256, Expect=4e-76]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [Score=333, Expect=3e-103]} {RNA1310_10585} {RNA815_25648} |
| 2. | MligTC455_35142 | 436 | 9.07 | Mlig455_041946 | Neo: Germline Age: - Region-specific R5: 5.599 Region-enriched R5: 5.347/0.00000 |
2.54 | - | - | 0.975 | - | 0.727 | 0.838 | Mlig455_041946 {REF} {Length: 3158} {RNA1509_17316, RNA1509_38876, RNA1509_8350} {RNA1310_5632, RNA1509_17316, RNA1509_38876, RNA1509_8350} {RNA1509_17316, RNA1509_38876, RNA1509_8350, RNA815_1618.1} | |
| 3. | MligTC455_52243 | 118 | 2.47 | Mlig455_029887 | Neo: - Age: - Region-enriched R5: 3.082/0.00276 Regeneration-upregulated TP: 6.270 Regeneration-enriched TP: 6.270 |
1.829 | 0.859 | - | 0.970 | - | - | - | Mlig455_029887 {REF} {Length: 961} {RNA1310_98095} {RNA815_59125} | |
| 4. | MligTC455_12212 | 89 | 1.86 | Mlig455_044685 | Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 4.084/0.00005 |
1.756 | 0.800 | - | 0.956 | - | - | - | Mlig455_044685 {REF} {Length: 3776} {TRANSSPLICED} {Pfam: Myb/SANT-like DNA-binding domain [PF13837.8, score=25.9]; Myb-like DNA-binding domain [PF13921.8, score=19.1]; Myb/SANT-like DNA-binding domain [PF13873.8, score=18.7]} {RNA1509_24862, RNA1509_54105, RNA1509_56945} {RNA1310_24568, RNA1509_24862, RNA1509_54105, RNA1509_56945} {RNA1509_24862, RNA1509_54105, RNA1509_56945, RNA815_11589} | |
| 5. | MligTC455_30240 | 166 | 3.45 | Mlig455_005670, Mlig455_018656, Mlig455_018858 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.892/0.02593 |
ORC3 | 1.744 | 0.785 | - | 0.959 | - | - | - | Mlig455_005670 {REF} {Length: 463} {Pfam: Domain of unknown function (DUF4081) [PF13312.8, score=24.1]} {RNA1509_37248} {RNA1310_104355} {RNA815_20398} Mlig455_018656 {REF} {Length: 2975} {TRANSSPLICED} {Pfam: Origin recognition complex (ORC) subunit 3 N-terminus [PF07034.13, score=115.4]; Origin recognition complex winged helix C-terminal [PF18137.3, score=44.7]} {Human: ENSG00000135336, ORC3, origin recognition complex subunit 3, [RH, Score=73.6, Expect=6e-13]} {Mouse: ENSMUSG00000040044, Orc3, origin recognition complex, subunit 3, [RH, Score=80.1, Expect=5e-15]} {RNA1509_22061} {RNA1310_6573, RNA1509_22061} {RNA1509_22061, RNA815_25413} Mlig455_018858 {REF} {Length: 2968} {TRANSSPLICED} {Pfam: Origin recognition complex (ORC) subunit 3 N-terminus [PF07034.13, score=116.6]; Origin recognition complex winged helix C-terminal [PF18137.3, score=44.5]} {Human: ENSG00000135336, ORC3, origin recognition complex subunit 3, [RH, Score=75.1, Expect=2e-13]} {Mouse: ENSMUSG00000040044, Orc3, origin recognition complex, subunit 3, [RH, Score=79.0, Expect=9e-15]} {RNA1509_22061} {RNA1310_6573} {RNA815_25413} |
| 6. | MligTC455_52693 | 53 | 1.09 | Mlig455_010844 | Neo: - Age: - |
0.99 | - | - | 0.990 | - | - | - | Mlig455_010844 {REF} {Length: 2348} {NoTransDecoderORF} {RNA1310_45390} {RNA815_62908} | |
| 7. | MligTC455_14133 | 34 | 0.7 | Mlig455_049257 | Neo: Irradiation Age: - Region-enriched R6: 7.088/0.00083 |
GLS | 0.986 | - | - | 0.986 | - | - | - | Mlig455_049257 {REF} {Length: 2534} {Pfam: Glutaminase [PF04960.17, score=249.2]; Ankyrin repeats (3 copies) [PF12796.9, score=32.6]; Ankyrin repeats (many copies) [PF13637.8, score=31.0]; Ankyrin repeats (many copies) [PF13857.8, score=28.8]; EF-hand domain [PF17959.3, score=22.7]} {Human: ENSG00000115419, GLS, glutaminase, [Score=374, Expect=2e-120]; ENSG00000135423, GLS2, glutaminase 2, [Score=360, Expect=5e-116]} {Mouse: ENSMUSG00000026103, Gls, glutaminase, [Score=372, Expect=7e-120]; ENSMUSG00000044005, Gls2, glutaminase 2 (liver, mitochondrial), [Score=368, Expect=4e-119]} {Dmel: FBgn0261625, GLS, Glutaminase, [Score=379, Expect=8e-123]} {Celegans: WBGene00007480, glna-1, GLutamiNAse, [Score=383, Expect=6e-123]} {Smed: dd_Smed_v6_15097_0_1, dd_Smed_v6_15097_0_1, [Score=298, Expect=1e-94]} {RNA1509_45807} {RNA1310_38679, RNA1509_45807} |
| 8. | MligTC455_30930 | 8 | 0.16 | Mlig455_042109 | Neo: - Age: - |
0.981 | - | - | 0.981 | - | - | - | Mlig455_042109 {REF} {Length: 2014} {Pfam: F5/8 type C domain [PF00754.27, score=35.0]; Phage integrase, N-terminal SAM-like domain [PF13495.8, score=25.3]; Phage integrase family [PF00589.24, score=23.9]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=21.3]} {RNA1509_19505} {RNA1310_1707} {RNA815_3378} | |
| 9. | MligTC455_15651 | 59 | 1.23 | Mlig455_046263 | Neo: - Age: - |
DSTYK | 0.962 | - | - | 0.962 | - | - | - | Mlig455_046263 {REF} {Length: 4007} {Pfam: Protein kinase domain [PF00069.27, score=112.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=106.5]; Fungal protein kinase [PF17667.3, score=18.4]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=612, Expect=0.0]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=606, Expect=0.0]} {Dmel: FBgn0259680, Pkcdelta, Protein kinase C delta, [Score=81.6, Expect=2e-15]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=78.6, Expect=1e-14]} {Smed: dd_Smed_v6_4436_0_1, dd_Smed_v6_4436_0_1, [Score=533, Expect=7e-176]} {RNA1509_51957} {RNA1310_22897} {RNA815_9862} |
| 10. | MligTC455_30267 | 553 | 11.51 | Mlig455_000281, Mlig455_000282, Mlig455_000432 | Neo: - Age: - Region-enriched R5: 2.426/0.04566 |
0.962 | 0.962 | - | - | - | - | - | Mlig455_000281 {REF} {Length: 158} {NoTransDecoderORF} {RNA1509_16349} {RNA1310_18082} {RNA815_43541} Mlig455_000282 {REF} {Length: 1776} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=23.0]} {RNA1509_16349} {RNA1310_2575} {RNA815_43541} Mlig455_000432 {REF} {Length: 3698} {RNA1509_16349} {RNA1310_2575} {RNA815_43541} |
|
| 11. | MligTC455_50706 | 86 | 1.8 | Mlig455_009216 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_009216 {REF} {Length: 1919} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=50.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=44.1]; SF3a60/Prp9 C-terminal [PF11931.10, score=30.6]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=22.9]; DBF zinc finger [PF07535.14, score=20.8]} {RNA1509_37337} {RNA1310_15898.1, RNA1509_37337} {RNA1509_37337, RNA815_6354} | |
| 12. | MligTC455_15303 | 571 | 11.9 | Mlig455_027117 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.104/0.01226 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_027117 {REF} {Length: 1224} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=19.3]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [Score=140, Expect=3e-39]} {RNA1509_16193} {RNA1310_28342} {RNA815_12542} | |
| 13. | MligTC455_10717 | 144 | 3 | Mlig455_063156 | Neo: - Age: - Region-enriched R5: 2.266/0.00390 |
MAPK8IP3 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_063156 {REF} {Length: 1759} {TRANSSPLICED} {Pfam: JNK_SAPK-associated protein-1 [PF09744.11, score=79.3]} {Human: ENSG00000138834, MAPK8IP3, mitogen-activated protein kinase 8 interacting protein 3, [Score=79.3, Expect=2e-15]; ENSG00000008294, SPAG9, sperm associated antigen 9, [Score=75.5, Expect=3e-14]} {Mouse: ENSMUSG00000024163, Mapk8ip3, mitogen-activated protein kinase 8 interacting protein 3, [Score=78.6, Expect=2e-15]; ENSMUSG00000020859, Spag9, sperm associated antigen 9, [Score=75.5, Expect=2e-14]} {Dmel: FBgn0024187, syd, sunday driver, [Score=79.0, Expect=1e-15]} {Celegans: WBGene00007860, rilp-1, RILP (Rab7-Interacting Lysosomal Protein) homolog, [Score=64.3, Expect=3e-11]} {Smed: dd_Smed_v6_3798_0_2, dd_Smed_v6_3798_0_2, [Score=71.6, Expect=2e-13]} {RNA1509_55505} {RNA1310_19989.1} {RNA815_12559.1} |
| 14. | MligTC455_47350 | 121 | 2.53 | Mlig455_061845 | Neo: - Age: - |
DNMT3B | 0.951 | - | - | 0.951 | - | - | - | Mlig455_061845 {REF} {Length: 2275} {TRANSSPLICED} {Pfam: Cysteine rich ADD domain in DNMT3 [PF17980.3, score=29.7]} {Human: ENSG00000088305, DNMT3B, DNA methyltransferase 3 beta, [Score=89.0, Expect=1e-17]} {Mouse: ENSMUSG00000027478, Dnmt3b, DNA methyltransferase 3B, [Score=97.1, Expect=2e-20]; ENSMUSG00000082079, Dnmt3c, DNA methyltransferase 3C, [Score=94.7, Expect=1e-19]} {RNA1509_22614, RNA1509_23149} {RNA1310_10697.1, RNA1509_22614} {RNA1509_22614, RNA815_14886} |
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