Data search


search
Exact
Search

Results for MligTC455_47352

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47352 40 0.83 Mlig455_005213

Neo: -

Age: logFC(26M/2M)=0.745

DPM1 Mlig455_005213 {REF} {Length: 2027} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=128.4]; Glycosyltransferase like family 2 [PF13641.8, score=64.8]; Glycosyl transferase family 21 [PF13506.8, score=29.8]; Glycosyltransferase like family 2 [PF10111.11, score=18.5]} {Human: ENSG00000000419, DPM1, dolichyl-phosphate mannosyltransferase subunit 1, catalytic, [RH, Score=368, Expect=7e-130]} {Mouse: ENSMUSG00000093752, Gm20716, predicted gene 20716, [RH, Score=369, Expect=2e-130]; ENSMUSG00000078919, Dpm1, dolichol-phosphate (beta-D) mannosyltransferase 1, [RH, Score=369, Expect=2e-130]} {Dmel: FBgn0032799, CG10166, [RH, Score=348, Expect=2e-122]} {Celegans: WBGene00022044, dpm-1, Dolichol Phosphate Mannosyltransferase, [RH, Score=315, Expect=7e-110]} {Smed: dd_Smed_v6_5598_0_2, dd_Smed_v6_5598_0_2, [RH, Score=345, Expect=2e-121]} {RNA1509_10804} {RNA1310_9524.2} {RNA815_1473.1}

Cumulative graph for MligTC455_47352

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.32 1.181 1.00000 1.00000
RegionR2 -1.622 1.181 0.98655 1.00000
RegionR3 -0.914 1.181 0.93399 1.00000
RegionR4 2.002 1.181 0.18876 0.46300
RegionR5 -0.199 1.181 0.80011 1.00000
RegionR6 -0.507 1.181 0.87851 1.00000
RegionR7 -2.153 1.181 1.00000 1.00000
RegionR8 3.073 1.181 0.13499 0.67232

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.61 1.181 1.00000 1.00000
RegenerationR2 1.717 1.181 0.20690 0.65419
RegenerationR3 2.295 1.181 0.11765 0.53443
RegenerationR4 0.297 1.181 0.89542 1.00000
RegenerationR5 2.441 1.181 0.02924 0.28786
RegenerationR6 1.05 1.181 0.48639 0.79616
RegenerationBL -2.384 1.181 1.00000 1.00000
RegenerationTP 0.179 1.181 0.74016 1.00000


Genes with expression patterns similar to MligTC455_47352

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47352 40 0.83 Mlig455_005213

Neo: -

Age: logFC(26M/2M)=0.745

DPM1 2 - - - - 1.000 1.000 Mlig455_005213 {REF} {Length: 2027} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=128.4]; Glycosyltransferase like family 2 [PF13641.8, score=64.8]; Glycosyl transferase family 21 [PF13506.8, score=29.8]; Glycosyltransferase like family 2 [PF10111.11, score=18.5]} {Human: ENSG00000000419, DPM1, dolichyl-phosphate mannosyltransferase subunit 1, catalytic, [RH, Score=368, Expect=7e-130]} {Mouse: ENSMUSG00000093752, Gm20716, predicted gene 20716, [RH, Score=369, Expect=2e-130]; ENSMUSG00000078919, Dpm1, dolichol-phosphate (beta-D) mannosyltransferase 1, [RH, Score=369, Expect=2e-130]} {Dmel: FBgn0032799, CG10166, [RH, Score=348, Expect=2e-122]} {Celegans: WBGene00022044, dpm-1, Dolichol Phosphate Mannosyltransferase, [RH, Score=315, Expect=7e-110]} {Smed: dd_Smed_v6_5598_0_2, dd_Smed_v6_5598_0_2, [RH, Score=345, Expect=2e-121]} {RNA1509_10804} {RNA1310_9524.2} {RNA815_1473.1}
2. MligTC455_09017 12 0.24 Mlig455_014487, Mlig455_014508

Neo: -

Age: -

FYN 0.962 - - - - 0.962 -

Mlig455_014487 {REF} {Length: 2444} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=301.6]; Protein kinase domain [PF00069.27, score=148.1]; SH2 domain [PF00017.26, score=77.9]; Variant SH3 domain [PF14604.8, score=40.1]; SH3 domain [PF00018.30, score=37.3]; Variant SH3 domain [PF07653.19, score=28.1]; Haspin like kinase domain [PF12330.10, score=24.7]; ABC1 atypical kinase-like domain [PF03109.18, score=20.9]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.9]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [RH, Score=525, Expect=5e-180]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [RH, Score=499, Expect=8e-170]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [RH, Score=526, Expect=1e-180]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=488, Expect=3e-166]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [RH, Score=482, Expect=1e-163]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [RH, Score=532, Expect=0.0]} {RNA1509_36919} {RNA1310_10880} {RNA815_32391}

Mlig455_014508 {REF} {Length: 2263} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=301.9]; Protein kinase domain [PF00069.27, score=148.2]; SH2 domain [PF00017.26, score=76.1]; Variant SH3 domain [PF14604.8, score=40.2]; SH3 domain [PF00018.30, score=37.5]; Variant SH3 domain [PF07653.19, score=28.4]; Haspin like kinase domain [PF12330.10, score=22.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.6]; ABC1 atypical kinase-like domain [PF03109.18, score=21.2]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [RH, Score=523, Expect=0.0]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [RH, Score=524, Expect=0.0]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=490, Expect=8e-169]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [RH, Score=479, Expect=1e-164]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_36919} {RNA1310_10880} {RNA815_46373}
3. MligTC455_15839 8 0.16 Mlig455_046211

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_046211 {REF} {Length: 936} {NoTransDecoderORF}
4. MligTC455_10122 57 1.19 Mlig455_038355

Neo: -

Age: -

SIK3 0.957 - - - - 0.957 - Mlig455_038355 {REF} {Length: 5615} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=228.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=119.7]; Kinase-like [PF14531.8, score=27.2]; Phosphotransferase enzyme family [PF01636.25, score=19.0]} {Human: ENSG00000160584, SIK3, SIK family kinase 3, [Score=324, Expect=1e-94]; ENSG00000170145, SIK2, salt inducible kinase 2, [Score=320, Expect=1e-95]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=311, Expect=4e-94]} {Mouse: ENSMUSG00000034135, Sik3, SIK family kinase 3, [Score=325, Expect=3e-95]; ENSMUSG00000037112, Sik2, salt inducible kinase 2, [Score=323, Expect=1e-96]; ENSMUSG00000024042, Sik1, salt inducible kinase 1, [Score=311, Expect=7e-94]} {Dmel: FBgn0025625, Sik2, Salt-inducible kinase 2, [Score=326, Expect=2e-95]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=293, Expect=2e-85]} {Smed: dd_Smed_v6_8348_0_2, dd_Smed_v6_8348_0_2, [RH, Score=376, Expect=1e-113]} {RNA1509_14551} {RNA1310_21972.1} {RNA815_29595}
5. MligTC455_30694 3 0.06 Mlig455_042172

Neo: -

Age: -

VIRMA 0.956 - - - - 0.956 - Mlig455_042172 {REF} {Length: 9345} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=121.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.1]; Integrase zinc binding domain [PF17921.3, score=65.5]; Virilizer, N-terminal [PF15912.7, score=64.6]; Integrase core domain [PF00665.28, score=49.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.3]; Aspartyl protease [PF13650.8, score=25.4]} {Human: ENSG00000164944, VIRMA, vir like m6A methyltransferase associated, [Score=139, Expect=6e-32]} {Mouse: ENSMUSG00000040720, Virma, vir like m6A methyltransferase associated, [Score=144, Expect=2e-33]} {Dmel: FBgn0003977, vir, virilizer, [RH, Score=90.1, Expect=3e-17]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=441, Expect=3e-131]} {RNA1509_2811, RNA1509_55457} {RNA1310_704.2, RNA1509_55457} {RNA1509_55457, RNA815_993.1}
6. MligTC455_08729 14 0.28 Mlig455_027601

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_027601 {REF} {Length: 724} {NoTransDecoderORF} {RNA1310_117665}
7. MligTC455_12722 4 0.08 Mlig455_014103

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_014103 {REF} {Length: 3123} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=24.1]} {RNA1310_74230} {RNA815_21728.2}
8. MligTC455_26446 4 0.08 Mlig455_034972, Mlig455_035185, Mlig455_048944, Mlig455_050752, Mlig455_052071, Mlig455_058850, Mlig455_059939

Neo: -

Age: Up-Down-Down

0.951 - - - - 0.951 -

Mlig455_034972 {REF} {Length: 818} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=76.6, Expect=6e-16]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242}

Mlig455_035185 {REF} {Length: 1706} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=82.8, Expect=6e-17]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242}

Mlig455_048944 {REF} {Length: 1853} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=113, Expect=4e-27]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242}

Mlig455_050752 {REF} {Length: 1709} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=82.4, Expect=8e-17]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242}

Mlig455_052071 {REF} {Length: 1697} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=82.4, Expect=7e-17]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242}

Mlig455_058850 {REF} {Length: 1961} {Pfam: Integrase zinc binding domain [PF17921.3, score=38.9]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=111, Expect=3e-26]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242}

Mlig455_059939 {REF} {Length: 2090} {Pfam: Integrase zinc binding domain [PF17921.3, score=38.7]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=111, Expect=3e-26]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA