M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_30694

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30694 3 0.06 Mlig455_042172

Neo: -

Age: -

 VIRMA Mlig455_042172 {REF} {Length: 9345} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=121.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.1]; Integrase zinc binding domain [PF17921.3, score=65.5]; Virilizer, N-terminal [PF15912.7, score=64.6]; Integrase core domain [PF00665.28, score=49.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.3]; Aspartyl protease [PF13650.8, score=25.4]} {Human: ENSG00000164944, VIRMA, vir like m6A methyltransferase associated, [Score=139, Expect=6e-32]} {Mouse: ENSMUSG00000040720, Virma, vir like m6A methyltransferase associated, [Score=144, Expect=2e-33]} {Dmel: FBgn0003977, vir, virilizer, [RH, Score=90.1, Expect=3e-17]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=441, Expect=3e-131]} {RNA1509_2811, RNA1509_55457} {RNA1310_704.2, RNA1509_55457} {RNA1509_55457, RNA815_993.1}

Cumulative graph for MligTC455_30694

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_30694

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30694 3 0.06 Mlig455_042172

Neo: -

Age: -

 VIRMA 1 - - - - 1.000 - Mlig455_042172 {REF} {Length: 9345} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=121.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.1]; Integrase zinc binding domain [PF17921.3, score=65.5]; Virilizer, N-terminal [PF15912.7, score=64.6]; Integrase core domain [PF00665.28, score=49.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.3]; Aspartyl protease [PF13650.8, score=25.4]} {Human: ENSG00000164944, VIRMA, vir like m6A methyltransferase associated, [Score=139, Expect=6e-32]} {Mouse: ENSMUSG00000040720, Virma, vir like m6A methyltransferase associated, [Score=144, Expect=2e-33]} {Dmel: FBgn0003977, vir, virilizer, [RH, Score=90.1, Expect=3e-17]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=441, Expect=3e-131]} {RNA1509_2811, RNA1509_55457} {RNA1310_704.2, RNA1509_55457} {RNA1509_55457, RNA815_993.1}
2. MligTC455_42293 28 0.59 Mlig455_053679

Neo: -

Age: -

 PIP5K1A 0.993 - - - - 0.993 - Mlig455_053679 {REF} {Length: 4383} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=268.6]} {Human: ENSG00000143398, PIP5K1A, phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, [RH, Score=416, Expect=1e-140]} {Mouse: ENSMUSG00000034902, Pip5k1c, phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma, [RH, Score=409, Expect=2e-136]; ENSMUSG00000024867, Pip5k1b, phosphatidylinositol-4-phosphate 5-kinase, type 1 beta, [RH, Score=404, Expect=7e-136]} {Dmel: FBgn0016984, sktl, skittles, [Score=434, Expect=2e-144]} {Celegans: WBGene00004087, ppk-1, PIP Kinase, [Score=409, Expect=6e-137]} {Smed: dd_Smed_v6_7632_0_3, dd_Smed_v6_7632_0_3, [Score=419, Expect=4e-142]} {RNA1509_47422} {RNA1310_16235.2, RNA1509_47422} {RNA1509_47422, RNA815_4999.1}
3. MligTC455_10122 57 1.19 Mlig455_038355

Neo: -

Age: -

 SIK3 0.991 - - - - 0.991 - Mlig455_038355 {REF} {Length: 5615} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=228.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=119.7]; Kinase-like [PF14531.8, score=27.2]; Phosphotransferase enzyme family [PF01636.25, score=19.0]} {Human: ENSG00000160584, SIK3, SIK family kinase 3, [Score=324, Expect=1e-94]; ENSG00000170145, SIK2, salt inducible kinase 2, [Score=320, Expect=1e-95]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=311, Expect=4e-94]} {Mouse: ENSMUSG00000034135, Sik3, SIK family kinase 3, [Score=325, Expect=3e-95]; ENSMUSG00000037112, Sik2, salt inducible kinase 2, [Score=323, Expect=1e-96]; ENSMUSG00000024042, Sik1, salt inducible kinase 1, [Score=311, Expect=7e-94]} {Dmel: FBgn0025625, Sik2, Salt-inducible kinase 2, [Score=326, Expect=2e-95]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=293, Expect=2e-85]} {Smed: dd_Smed_v6_8348_0_2, dd_Smed_v6_8348_0_2, [RH, Score=376, Expect=1e-113]} {RNA1509_14551} {RNA1310_21972.1} {RNA815_29595}
4. MligTC455_04552 15 0.31 Mlig455_069681

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.677

 0.984 - - - - 0.984 - Mlig455_069681 {REF} {Length: 311} {NoTransDecoderORF} {RNA1509_12879} {RNA1310_633} {RNA815_23891.1}
5. MligTC455_01867 37 0.77 Mlig455_007032, Mlig455_069134

Neo: -

Age: -

Region-enriched R4: 4.976/0.00767

 0.982 - - - - 0.982 -

Mlig455_007032 {REF} {Length: 164} {NoTransDecoderORF}

Mlig455_069134 {REF} {Length: 352} {NoTransDecoderORF}
6. MligTC455_17658 8 0.17 Mlig455_070903

Neo: -

Age: -

 PRSS8 0.98 - - - - 0.980 - Mlig455_070903 {REF} {Length: 3042} {Pfam: Trypsin [PF00089.28, score=191.2]; Domain of unknown function (DUF1986) [PF09342.13, score=27.2]} {Human: ENSG00000052344, PRSS8, serine protease 8, [Score=157, Expect=2e-44]; ENSG00000088926, F11, coagulation factor XI, [Score=156, Expect=2e-42]; ENSG00000237412, PRSS56, serine protease 56, [Score=153, Expect=5e-41]; ENSG00000122194, PLG, plasminogen, [Score=150, Expect=1e-39]; ENSG00000160183, TMPRSS3, transmembrane serine protease 3, [Score=150, Expect=5e-41]} {Mouse: ENSMUSG00000059481, Plg, plasminogen, [Score=160, Expect=4e-43]; ENSMUSG00000024124, Prss30, protease, serine 30, [Score=154, Expect=9e-44]; ENSMUSG00000030800, Prss8, protease, serine 8 (prostasin), [Score=153, Expect=3e-43]; ENSMUSG00000024034, Tmprss3, transmembrane protease, serine 3, [Score=152, Expect=6e-42]} {Dmel: FBgn0031619, CG3355, [RH, Score=157, Expect=4e-45]} {Celegans: WBGene00006619, try-1, TRYpsin-like protease, [Score=130, Expect=3e-35]} {Smed: dd_Smed_v6_1427_0_1, dd_Smed_v6_1427_0_1, [RH, Score=188, Expect=1e-56]} {RNA1509_32263, RNA1509_41353} {RNA1310_26531.1, RNA1509_32263, RNA1509_41353} {RNA1509_32263, RNA1509_41353, RNA815_14174}
7. MligTC455_09017 12 0.24 Mlig455_014487, Mlig455_014508

Neo: -

Age: -

 FYN 0.978 - - - - 0.978 -

Mlig455_014487 {REF} {Length: 2444} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=301.6]; Protein kinase domain [PF00069.27, score=148.1]; SH2 domain [PF00017.26, score=77.9]; Variant SH3 domain [PF14604.8, score=40.1]; SH3 domain [PF00018.30, score=37.3]; Variant SH3 domain [PF07653.19, score=28.1]; Haspin like kinase domain [PF12330.10, score=24.7]; ABC1 atypical kinase-like domain [PF03109.18, score=20.9]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.9]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [RH, Score=525, Expect=5e-180]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [RH, Score=499, Expect=8e-170]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [RH, Score=526, Expect=1e-180]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=488, Expect=3e-166]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [RH, Score=482, Expect=1e-163]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [RH, Score=532, Expect=0.0]} {RNA1509_36919} {RNA1310_10880} {RNA815_32391}

Mlig455_014508 {REF} {Length: 2263} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=301.9]; Protein kinase domain [PF00069.27, score=148.2]; SH2 domain [PF00017.26, score=76.1]; Variant SH3 domain [PF14604.8, score=40.2]; SH3 domain [PF00018.30, score=37.5]; Variant SH3 domain [PF07653.19, score=28.4]; Haspin like kinase domain [PF12330.10, score=22.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.6]; ABC1 atypical kinase-like domain [PF03109.18, score=21.2]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [RH, Score=523, Expect=0.0]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [RH, Score=524, Expect=0.0]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=490, Expect=8e-169]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [RH, Score=479, Expect=1e-164]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_36919} {RNA1310_10880} {RNA815_46373}
8. MligTC455_20392 28 0.59 Mlig455_020400

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_020400 {REF} {Length: 1475} {Pfam: Homeodomain-like domain [PF13384.8, score=25.9]; Helix-turn-helix domain [PF13518.8, score=24.2]} {RNA1509_28798} {RNA1310_89189} {RNA815_14917.2}
9. MligTC455_05980 4 0.09 Mlig455_070057

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_070057 {REF} {Length: 365} {NoTransDecoderORF}
10. MligTC455_15839 8 0.16 Mlig455_046211

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_046211 {REF} {Length: 936} {NoTransDecoderORF}
11. MligTC455_31787 8 0.17 Mlig455_052630

Neo: -

Age: -

 TRIM3 0.969 - - - - 0.969 - Mlig455_052630 {REF} {Length: 2227} {Pfam: NHL repeat [PF01436.23, score=30.0]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=59.3, Expect=6e-09]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=59.3, Expect=4e-09]} {RNA1509_15622} {RNA1310_14145.1} {RNA815_3900.1}
12. MligTC455_00820 5 0.11 Mlig455_066101

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_066101 {REF} {Length: 166} {NoTransDecoderORF} {RNA1310_45089}
13. MligTC455_13867 2 0.04 Mlig455_018515

Neo: -

Age: -

 GRIN3B 0.967 - - - - 0.967 - Mlig455_018515 {REF} {Length: 1240} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.1]} {Human: ENSG00000116032, GRIN3B, glutamate ionotropic receptor NMDA type subunit 3B, [Score=57.8, Expect=1e-10]} {Mouse: ENSMUSG00000002771, Grin2d, glutamate receptor, ionotropic, NMDA2D (epsilon 4), [Score=51.2, Expect=2e-08]; ENSMUSG00000039579, Grin3a, glutamate receptor ionotropic, NMDA3A, [Score=51.2, Expect=2e-08]; ENSMUSG00000035745, Grin3b, glutamate receptor, ionotropic, NMDA3B, [Score=50.4, Expect=3e-08]} {Dmel: FBgn0010399, Nmdar1, NMDA receptor 1, [Score=45.1, Expect=2e-06]} {Celegans: WBGene00003775, nmr-2, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-2, [Score=43.5, Expect=5e-06]} {Smed: dd_Smed_v6_8187_0_2, dd_Smed_v6_8187_0_2, [Score=57.4, Expect=5e-11]} {RNA1509_56685} {RNA1310_16080} {RNA815_17919}
14. MligTC455_15365 15 0.3 Mlig455_060332

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_060332 {REF} {Length: 978} {RNA1310_84789}
15. MligTC455_54650 3 0.05 Mlig455_052728

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_052728 {REF} {Length: 376} {Pfam: Procyclic acidic repetitive protein (PARP) [PF05887.13, score=28.2]}
16. MligTC455_41474 104 2.16 Mlig455_014812

Neo: -

Age: -

 DNAJC27 0.966 - - - - 0.966 - Mlig455_014812 {REF} {Length: 5391} {Pfam: Ras family [PF00071.24, score=116.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=58.4]; ADP-ribosylation factor family [PF00025.23, score=41.9]; 50S ribosome-binding GTPase [PF01926.25, score=24.5]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=20.3]} {Human: ENSG00000115137, DNAJC27, DnaJ heat shock protein family (Hsp40) member C27, [Score=110, Expect=5e-29]} {Mouse: ENSMUSG00000020657, Dnajc27, DnaJ heat shock protein family (Hsp40) member C27, [Score=110, Expect=3e-29]; ENSMUSG00000027935, Rab13, RAB13, member RAS oncogene family, [Score=108, Expect=4e-29]} {Dmel: FBgn0029959, Rab39, [Score=98.2, Expect=3e-25]} {Celegans: WBGene00004279, rab-21, RAB family, [Score=93.6, Expect=1e-23]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=112, Expect=5e-31]} {RNA1509_34577} {RNA1310_27449.1, RNA1509_34577} {RNA1509_34577, RNA815_21008}
17. MligTC455_07266 2 0.04 Mlig455_038909

Neo: -

Age: -

 CHRM2 0.965 - - - - 0.965 - Mlig455_038909 {REF} {Length: 1610} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=96.9]} {Human: ENSG00000181072, CHRM2, cholinergic receptor muscarinic 2, [Score=82.0, Expect=6e-16]} {Mouse: ENSMUSG00000045613, Chrm2, cholinergic receptor, muscarinic 2, cardiac, [Score=79.7, Expect=2e-15]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [Score=69.7, Expect=4e-12]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [Score=53.1, Expect=3e-07]} {Smed: dd_Smed_v6_28214_0_1, dd_Smed_v6_28214_0_1, [Score=74.3, Expect=5e-14]} {RNA1509_26605} {RNA1310_72977} {RNA815_37371}
18. MligTC455_23211 28 0.58 Mlig455_061938

Neo: -

Age: -

Region-enriched R4: 4.330/0.02751

 0.965 - - - - 0.965 - Mlig455_061938 {REF} {Length: 2021} {RNA1509_12774} {RNA1310_9477.1} {RNA815_3474.1}
19. MligTC455_01821 27 0.56 Mlig455_052616, Mlig455_052660

Neo: -

Age: -

 0.964 - - - - 0.964 -

Mlig455_052616 {REF} {Length: 743} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_32930.1} {RNA815_64157}

Mlig455_052660 {REF} {Length: 698} {TRANSSPLICED} {RNA1310_32930.1} {RNA815_64157}
20. MligTC455_08729 14 0.28 Mlig455_027601

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_027601 {REF} {Length: 724} {NoTransDecoderORF} {RNA1310_117665}
21. MligTC455_39621 17 0.36 Mlig455_061228

Neo: Irradiation

Age: -

 NRDE2 0.961 - - - - 0.961 - Mlig455_061228 {REF} {Length: 5166} {TRANSSPLICED} {Pfam: NRDE-2, necessary for RNA interference [PF08424.12, score=139.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=39.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=37.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.1]; RING-type zinc-finger [PF13445.8, score=34.1]; Ring finger domain [PF13639.8, score=34.1]; Prokaryotic RING finger family 4 [PF14447.8, score=24.6]; zinc-RING finger domain [PF14634.8, score=23.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.3]; RING-H2 zinc finger domain [PF12678.9, score=20.8]; U-box domain [PF04564.17, score=19.3]; zinc RING finger of MSL2 [PF16685.7, score=18.9]} {Human: ENSG00000119720, NRDE2, NRDE-2, necessary for RNA interference, domain containing, [RH, Score=134, Expect=1e-30]} {Mouse: ENSMUSG00000021179, Nrde2, nrde-2 necessary for RNA interference, domain containing, [RH, Score=124, Expect=8e-28]} {Dmel: FBgn0265356, tn, thin, [Score=55.8, Expect=3e-07]} {Smed: dd_Smed_v6_12142_0_1, dd_Smed_v6_12142_0_1, [RH, Score=102, Expect=2e-21]} {RNA1509_20291, RNA1509_37760} {RNA1310_3668.1, RNA1509_20291, RNA1509_37760} {RNA1509_20291, RNA1509_37760, RNA815_2487.1}
22. MligTC455_32283 8 0.16 Mlig455_036099

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_036099 {REF} {Length: 575} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.3]} {RNA1310_12760} {RNA815_50138}
23. MligTC455_26427 15 0.31 Mlig455_054140

Neo: -

Age: logFC(26M/2M)=-1.151

 TRPM1 0.958 - - - - 0.958 - Mlig455_054140 {REF} {Length: 5171} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=79.8]; Ankyrin repeats (3 copies) [PF12796.9, score=77.6]; Ankyrin repeats (many copies) [PF13857.8, score=40.4]; Ankyrin repeat [PF00023.32, score=38.8]; Ankyrin repeat [PF13606.8, score=38.6]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=57.0, Expect=3e-07]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=57.0, Expect=3e-07]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=57.8, Expect=1e-07]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=56.6, Expect=3e-07]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=57.0, Expect=1e-07]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=61.2, Expect=6e-09]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.4, Expect=3e-19]} {RNA1509_29189} {RNA1310_1181, RNA1509_29189} {RNA1509_29189, RNA815_1111.1}
24. MligTC455_47352 40 0.83 Mlig455_005213

Neo: -

Age: logFC(26M/2M)=0.745

 DPM1 0.956 - - - - 0.956 - Mlig455_005213 {REF} {Length: 2027} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=128.4]; Glycosyltransferase like family 2 [PF13641.8, score=64.8]; Glycosyl transferase family 21 [PF13506.8, score=29.8]; Glycosyltransferase like family 2 [PF10111.11, score=18.5]} {Human: ENSG00000000419, DPM1, dolichyl-phosphate mannosyltransferase subunit 1, catalytic, [RH, Score=368, Expect=7e-130]} {Mouse: ENSMUSG00000093752, Gm20716, predicted gene 20716, [RH, Score=369, Expect=2e-130]; ENSMUSG00000078919, Dpm1, dolichol-phosphate (beta-D) mannosyltransferase 1, [RH, Score=369, Expect=2e-130]} {Dmel: FBgn0032799, CG10166, [RH, Score=348, Expect=2e-122]} {Celegans: WBGene00022044, dpm-1, Dolichol Phosphate Mannosyltransferase, [RH, Score=315, Expect=7e-110]} {Smed: dd_Smed_v6_5598_0_2, dd_Smed_v6_5598_0_2, [RH, Score=345, Expect=2e-121]} {RNA1509_10804} {RNA1310_9524.2} {RNA815_1473.1}
25. MligTC455_41766 211 4.4 Mlig455_030429, Mlig455_030463, Mlig455_030466

Neo: -

Age: -

 ZNF768 0.954 - - - - 0.954 -

Mlig455_030429 {REF} {Length: 2939} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=66.3]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=50.4]; Zinc finger, C2H2 type [PF00096.28, score=47.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.3]; Zinc-finger double domain [PF13465.8, score=20.3]} {Human: ENSG00000169957, ZNF768, zinc finger protein 768, [Score=80.9, Expect=1e-15]} {Mouse: ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=85.1, Expect=3e-17]} {Dmel: FBgn0020309, crol, crooked legs, [Score=71.2, Expect=8e-13]} {Smed: dd_Smed_v6_48354_0_1, dd_Smed_v6_48354_0_1, [Score=47.8, Expect=5e-06]} {RNA1509_25496} {RNA1310_18575} {RNA815_53687}

Mlig455_030463 {REF} {Length: 2773} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=32.7]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=32.5]} {Human: ENSG00000169957, ZNF768, zinc finger protein 768, [Score=51.6, Expect=1e-06]; ENSG00000154957, ZNF18, zinc finger protein 18, [Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000018347, Zkscan6, zinc finger with KRAB and SCAN domains 6, [Score=53.5, Expect=3e-07]; ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=52.0, Expect=8e-07]} {Smed: dd_Smed_v6_48354_0_1, dd_Smed_v6_48354_0_1, [Score=49.3, Expect=1e-06]} {RNA1509_25496, RNA1509_31651} {RNA1310_18575, RNA1509_31651} {RNA1509_31651, RNA815_53687}

Mlig455_030466 {REF} {Length: 2741} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=66.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=50.9]; Zinc finger, C2H2 type [PF00096.28, score=47.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.4]; Zinc-finger double domain [PF13465.8, score=20.3]} {Human: ENSG00000169957, ZNF768, zinc finger protein 768, [Score=81.3, Expect=8e-16]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=77.8, Expect=1e-14]} {Mouse: ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=85.5, Expect=3e-17]} {Dmel: FBgn0020309, crol, crooked legs, [Score=70.9, Expect=1e-12]} {Smed: dd_Smed_v6_48354_0_1, dd_Smed_v6_48354_0_1, [Score=48.9, Expect=2e-06]} {RNA1509_25496} {RNA1310_18575, RNA1509_25496} {RNA1509_25496, RNA815_53687}
26. MligTC455_34822 27 0.56 Mlig455_041526

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_041526 {REF} {Length: 3806} {NoTransDecoderORF} {RNA1509_49844} {RNA1310_100437} {RNA815_25765}
27. MligTC455_38463 19 0.39 Mlig455_057313

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_057313 {REF} {Length: 937} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_113003} {RNA815_23623}
28. MligTC455_12722 4 0.08 Mlig455_014103

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_014103 {REF} {Length: 3123} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=24.1]} {RNA1310_74230} {RNA815_21728.2}
29. MligTC455_45985 33 0.68 Mlig455_024368

Neo: -

Age: -

 CDC42SE2 0.951 - - - - 0.951 - Mlig455_024368 {REF} {Length: 4034} {TRANSSPLICED} {Pfam: P21-Rho-binding domain [PF00786.30, score=20.1]} {Human: ENSG00000158985, CDC42SE2, CDC42 small effector 2, [Score=42.7, Expect=1e-05]} {Mouse: ENSMUSG00000052298, Cdc42se2, CDC42 small effector 2, [Score=42.7, Expect=9e-06]; ENSMUSG00000046722, Cdc42se1, CDC42 small effector 1, [Score=42.4, Expect=1e-05]} {RNA1509_27868} {RNA1310_38537} {RNA815_37956}
30. MligTC455_00801 10 0.2 Mlig455_032874

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_032874 {REF} {Length: 542} {NoTransDecoderORF} {RNA1310_26475}
31. MligTC455_09940 3 0.06 Mlig455_067083

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_067083 {REF} {Length: 158} {NoTransDecoderORF}
32. MligTC455_18074 308 6.41 Mlig455_007066

Neo: -

Age: -

Region-enriched R5: 1.938/0.00132

 CROT 0.95 - - - - 0.950 - Mlig455_007066 {REF} {Length: 2615} {TRANSSPLICED} {Pfam: Choline/Carnitine o-acyltransferase [PF00755.22, score=415.8]} {Human: ENSG00000005469, CROT, carnitine O-octanoyltransferase, [RH, Score=407, Expect=7e-134]} {Mouse: ENSMUSG00000003623, Crot, carnitine O-octanoyltransferase, [RH, Score=405, Expect=3e-133]} {Dmel: FBgn0039543, CG12428, [RH, Score=293, Expect=2e-90]} {Celegans: WBGene00011850, T20B3.1, [RH, Score=274, Expect=2e-83]} {Smed: dd_Smed_v6_11465_0_2, dd_Smed_v6_11465_0_2, [RH, Score=293, Expect=2e-90]} {RNA1509_10147} {RNA1310_8405.1, RNA1509_10147} {RNA1509_10147, RNA815_4713}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA